Garra rufa (doctor fish): 141287875
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Entry
141287875 CDS
T11039
Symbol
cdx1a
Name
(RefSeq) homeobox protein CDX-1a
KO
K09312
homeobox protein CDX1/4
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141287875 (cdx1a)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
141287875 (cdx1a)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Caudal_act
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
141287875
NCBI-ProteinID:
XP_073676074
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All DBs
Position
16:complement(10536596..10550534)
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AA seq
238 aa
AA seq
DB search
MSVSFLLDTAMYGNPARHLNLSQPHLNVYPSAPYPDYSGYHPGPALGNDLHHTGSSWSPG
FGPGSREDWPPLYGHGTGHSLPVNGVEVNVIPPVDQGLLSGGPSAPVERDEPPDWMRRAG
APVNQGGKTRTKDKYRVVYSDVQRLELEKEFHFSRYITIRRKAELAVALSLSERQVKIWF
QNRRAKERKINKKRLQQAQQSSTPTPVNASSHVNTAMVSSTNNGLMTDNISTSIKEEY
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgagcttcctgctggacacggccatgtacggcaacccggcgagacacctgaac
ctcagccagcctcacctgaacgtctacccgtccgcgccatacccggactacagcggatac
cacccgggtccggccctcgggaatgacctgcatcacaccggcagctcgtggagtcctggg
ttcggcccgggttcccgcgaggattggccgccgctctacggccacgggacgggtcactcg
ctcccggtgaacggcgtggaggtcaacgtcattccgccggtggaccaggggctgctgagc
ggcggtccgagcgcgccggtggagagagatgagccgccggattggatgagacgcgccgga
gctcccgtgaaccagggcggaaagacacggacgaaggacaaatacagagtggtgtacagt
gatgtccagcgcctggagctggagaaggaatttcatttcagccgctacatcaccatcaga
cggaaagcagagcttgcggtggccctcagcctatcagaacgccaggtgaagatctggttt
caaaacagacgagccaaagaaaggaaaattaacaagaaacgactccagcaggctcagcag
agctccacacctacaccggtcaatgcgtccagccacgtcaacaccgccatggtcagcagc
accaataacggcttgatgacagacaatatatcgactagcatcaaagaggaatactga
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