Garra rufa (doctor fish): 141287887
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Entry
141287887 CDS
T11039
Symbol
pdlim3b
Name
(RefSeq) PDZ and LIM domain protein 3b isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
grf Garra rufa (doctor fish)
Pathway
grf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
141287887 (pdlim3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
grf04990
]
141287887 (pdlim3b)
Domain-containing proteins not elsewhere classified [BR:
grf04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
141287887 (pdlim3b)
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
141287887
NCBI-ProteinID:
XP_073676084
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All DBs
Position
16:34874213..34897414
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AA seq
412 aa
AA seq
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MTSREEWHPGIIFLSFTLQTPHACLKGTQRQALASNRVWVSHPSRADSSFLTADLLPIRG
SKFNFQKEEAEQNKTAMPQNVVLDGPAPWGFRLSGGKDFNQPLTITRVTPGSKASRVNLC
PGDIILSIQGASTDDMTHADAQNKIKDSTNQLVLKIERPETKMWSPQVIEEGKVNPFKIN
LEAEKQEVDYFEHKFNVRPKPFISASQKSDSTSQTLMGNVAPMPGTPSTGSRAGLSAQYN
SPIALYSADNVSNTLQQAQMSNVVRQAAPSPKPLTSIEDSHVYRMLQENQEESHEPRQSG
SFKALQDYVESDGTRPMVTRSVKAPVTKPQAATSSLQKLPLCDKCGTGIVGPVVKARDKY
RHPACFVCSDCGLNLKQKGYFFVEGQMYCEAHARMRMAPPEGHDLVTVYPTA
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgacctcacgagaggagtggcatcccggcatcatctttctttcattcactctccaaacc
ccacacgcatgcttaaaagggactcagagacaggctctggcttccaatcgtgtttgggtg
agccatccgtccagagctgattcttcttttcttactgcagatctcttgccaataagagga
agcaagttcaactttcagaaagaggaggctgaacaaaacaagacagctatgccacagaac
gtggtgctggacgggccagccccttggggatttcggctttcaggaggcaaagattttaac
cagccgctgaccataactcgggtgacaccaggcagtaaggcatctcgggtcaacctgtgt
ccaggagacatcatcttgtccatccagggagcgtccactgatgatatgactcacgctgac
gctcagaacaagatcaaagactccaccaatcagcttgtcctcaagatagagaggccagag
actaaaatgtggtcacctcaggttatagaagaggggaaagtaaacccattcaaaatcaat
ttggaggcagagaagcaagaggttgattacttcgaacacaagtttaatgtcagaccaaag
cccttcatatctgcaagccaaaagagtgacagcacatcccagacgctgatgggaaatgta
gctccgatgcctggcaccccgtcgactgggtccagggcaggtctttctgcacagtataat
tcccccattgcattatactcagcagataatgtctcaaatacactgcagcaggctcagatg
tccaatgtagtcaggcaggcagcaccaagccctaaacccctgacgtccattgaagactct
cacgtgtaccgtatgctccaggagaaccaagaggagtctcatgaaccacgtcagtctgga
tcatttaaggccctacaagactatgtggagagtgatggcacaaggcccatggtgactaga
agtgtaaaagccccagtgacaaagccccaagccgccacgtcctcactgcagaagctgcct
ctctgtgataaatgtggcactggtattgttgggccggtggtgaaagctcgggataagtac
cgccatccagcctgtttcgtgtgctcagactgcggcttgaacttgaagcagaagggctac
tttttcgtggagggacagatgtactgtgaagcccatgctcgaatgcgaatggccccacct
gagggacatgatctagttactgtatatcccactgcttag
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