Garra rufa (doctor fish): 141287902
Help
Entry
141287902 CDS
T11039
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
grf Garra rufa (doctor fish)
Pathway
grf04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
141287902 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141287902 (atrx)
03036 Chromosome and associated proteins [BR:
grf03036
]
141287902 (atrx)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
141287902 (atrx)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
141287902 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ATRX_C
ADD_ATRX
Helicase_C
SPT6_acidic
Motif
Other DBs
NCBI-GeneID:
141287902
NCBI-ProteinID:
XP_073676096
LinkDB
All DBs
Position
16:complement(3417846..3502033)
Genome browser
AA seq
2049 aa
AA seq
DB search
MTTDICRSSKLNTLVTKLHEFLGHSPDDESIDSQDISNGKMASSDSNNPDEKMNEPGCSS
EMTKPSSSRSKRKPSFVTKHTAVDEPECANESGGEPGTEDTTQSSLDMSKLPQGTVVVKP
EPVANEAKDEFRGPEFRSRGSKVKEDGSRKRPDEQLKEIFNCTACGQQVNHFQRDSVFQH
PALHVLICKSCFKYYMSDDISKDEDGMDEQCRWCAEGGNLMCCDYCSNAFCKKCILRNLG
RKELSEIMSEESKWHCYVCRPEPLQDFVKTCEKVLLNLESSYRKPRGEGDKTKREDRKHK
HKKREKTAVNGQDCASDGAGMLNFSFKTLTVPKELVKKTKKLIETTNGLNRTFVQFLQQT
SKGREVSAVSFRHLKAFKSVLSDLKKAHAALEESLENEFESKGIKFQNGEEQRPPNSQNA
DHTVVNSHHDEPAPVKEDGLESTTKDENPVVEEDENQQDCNSADVEMDESPPPSPEKAQD
QPEESGAKEQEMADNPDLEENSVPPGEGSLDKDIVSVPPSVPEELFEMVESLAVKKEVHD
ESNSSDSSDGKSTSNTEVVESNKSLTKLGKKLVVKLTPVPLKITIKRDKSKEKSPSEDMD
GDTLPKEGQDSRRSPRMKTTPLRKSPEAKSKRKSRSSTAKEEKSDVVEEQGDSDSDEVPE
VLQTAALKASSNESEPESASGKGTKKKKLASRSTEKPKPKRKLDMGTSDSEQSDKSSTAN
KRRAKKKKGRQSDSSNHNSDLEKEMKSLSKISSGKKTSKAVKKEENESKKEAKKGPKRSF
EKKRRSQREKPKIKEEELSSSDEEEQQEEEQAANSDEDSDQQKIKPILESVIASIDGFHQ
SSGDEIDLKAESSQVVDDDDDPENRIAKRMLLAQIKANYSSGADSSSDDENADGDSTKKG
KNGTKKRDESENEDEDEDETSDSGSDVEVKKGGRRHRLLSKKLTLSEADSDDETTVKNKK
ESKKRSRRKVGSDDSADSDFEQSRSGSSDASALSEAVSEEDDDDEKSNKRKTRSSNKAGK
DGERSYQKEKKKRRRIKVQDSSSSGKSGGEEDGEDEDDDKGTPKGRKKIRKIIKDDKLRT
ETRDALKEEEERRKRIAERERLREKLRETIVVEESSQVTCPITTKLVLDEDEETKEPLVQ
VHRNLVTKLKPHQVDGVQFMWDCCCESVKKVEKSSGSGCILAHCMGLGKTLQVVTFLHTV
LLCEKLNFTTALVVCPLNTVLNWLNEFEKWQEGLTDEESLEVTELATVKRPQERAYALQR
WQEDGGVMIIGYEMYRNLTQGRNIKSKKLKEVFQKTLVDPGPDFVICDEGHILKNEASAV
SKAMNSIRTRRRVVLTGTPLQNNLIEYHCMVTFIKENLLGSVKEFRNRFINPIQNGQCAD
STLIDVRVMKKRAHILYEMLAGCVQRRDYTALTKFLPPKHEYVLAIRLTPIQCKLYRYYL
DHFTGVGSALESGRGRAGTKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMEEFI
ASETEESSMSLTSEDEKPKRKKKRGKGKEQSSDKSDSDDLEVIKEWNTSSRGGNPEGRNR
AEPVEEVRPSNSGPGSPSPDWYKEFVTEPDSEVLEHSGKMVLLFEILRMAEEVEEKVLVF
SQSLISLDLIEDFLELAGRAKEEGKLSPYKGEGKWFRNIDYYRLDGSTNATTRKKWAEEF
NDTTNVRGRLFLISTRAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQVKTVFV
YRFLAQGTMEDKIYDRQIAKQSLSFRVVDQQQIERHFTMNELTELYTFEPDQLDDPSEKK
SKRATPMLPKDPFLAELLHSYKDHIVGYHEHDSLLDHKEEEALSEEDRKAAWAEYEAEKK
GLSMRFNQPSYSQMGVGAGPNSYFPFNVAALASMSNQQLEELINQGRQKVMEATNALKSV
PREPLEDIIAQVWKENPSLPENQVQSMALGRQAGYELEIKHREAVYRDVLGKQQTLMMYV
QKVIANRKVQEQQMAMARQGMLLNQLAMQNGLTGPMNQMDLLGLYQQLGALQGLPSSQLG
KNPGPSKGL
NT seq
6150 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgacatttgcaggtctagtaagttgaatacattggtgactaaacttcatgag
ttcttgggtcattctccggacgacgaaagcattgattctcaagacatttccaatggtaaa
atggcttccagtgactcaaacaaccctgatgagaaaatgaatgagcctggttgctcctca
gaaatgaccaaaccctcatcttcacgctcaaagagaaaaccttcatttgtgaccaagcac
actgctgtggatgaacctgaatgtgcaaatgagagcggaggtgaacccggcacagaggac
accacgcagagcagtctggatatgagcaagctaccacaaggcacagtggtggtgaagcca
gagccggttgctaatgaagctaaagacgagttccgcggcccggagttccgcagcagagga
agtaaagtgaaagaggacggtagtcggaaacgtcccgatgagcagctcaaggagattttt
aattgcacagcatgtggacagcaagtcaaccactttcaaagagattctgtctttcagcat
cccgcactacatgttcttatctgcaagtcatgtttcaagtattatatgagtgacgatatt
agcaaggatgaagatggaatggatgagcagtgcaggtggtgtgcagagggtggtaacctg
atgtgctgtgactactgcagcaatgccttctgcaaaaagtgcattttgagaaaccttggg
cgaaaagagctatctgaaatcatgagtgaagaaagcaagtggcactgctatgtgtgccgc
ccagagccactgcaggactttgttaaaacctgtgagaaagttttgctcaatctggaatca
tcttacagaaagcccaggggagagggtgacaagacaaagcgtgaagatcgtaaacacaag
cataaaaagcgagaaaaaactgctgtaaatggacaggattgtgcctcagacggagcagga
atgttaaacttttcctttaagacgttgacggttccaaaagagcttgtcaaaaagaccaaa
aaactcatcgagaccacaaacggtttaaatcgtacttttgtacaatttcttcagcaaacg
tcaaagggccgtgaagttagcgcagtaagttttagacacttaaaggccttcaaatcagtt
ttgtctgatctgaaaaaggcccatgcggctctggaggaatccctcgaaaatgaatttgaa
tcaaaaggaattaagtttcaaaatggagaggagcaaagaccaccaaacagtcaaaatgcg
gatcatacagttgttaactcgcaccatgatgagcctgctcctgttaaagaagatggtttg
gaatccactaccaaggatgaaaatcctgtggtagaagaggatgaaaaccaacaggactgt
aactcagctgatgttgaaatggatgagagccctccaccctctccagaaaaagctcaggac
cagcctgaagaaagtggagctaaagagcaggaaatggcagataatcctgacctcgaggaa
aactctgtgccacctggtgaagggtctcttgataaagacattgtgtctgttcctccgtct
gtcccagaagaactctttgagatggttgagagtcttgcggtgaagaaagaagttcatgat
gagagcaactcgagcgattccagtgatgggaaatcaacctccaacactgaggttgtagaa
tccaataagagccttacaaaactggggaaaaaactcgttgtcaaactaacacctgttcct
cttaaaattaccataaaacgagataagagcaaagaaaagtcgccttcagaagacatggat
ggtgacacgttgccaaaagagggtcaagatagcagacgctcccccaggatgaagaccaca
ccgttacgcaagtcaccggaggcgaagagcaaacgcaaatcgaggtcgtcaacggcaaaa
gaagagaagagcgacgtagtcgaagagcagggtgattcagactcagatgaagtccctgag
gtcctccagacagctgccttgaaggccagctctaatgagagtgaacctgaaagcgcttct
ggcaaaggaaccaagaagaagaagttagcttctcgctccaccgagaaaccgaagccaaag
cgtaaactcgatatgggcacttcagattcagaacagagcgacaagtcttcaacggcaaac
aaaaggagggccaaaaaaaagaagggcagacaatcggactcctcaaaccacaactccgac
cttgagaaagagatgaaaagcctgtccaagatcagtagtggtaaaaaaacatccaaagct
gtcaaaaaggaagagaacgaatccaagaaagaggctaagaaaggacctaaaaggtcattc
gagaaaaaacgaaggtcgcagagagaaaagcctaaaatcaaggaagaagagctgtcctcc
agtgatgaagaagagcagcaggaggaggagcaggccgctaactcggatgaagacagtgat
cagcagaagattaaaccaatacttgagtccgtgattgctagtattgatggtttccatcag
tcatcaggtgatgaaattgatttgaaggctgaatcctcccaggtggtggatgatgacgac
gatccagaaaatagaattgccaagaggatgcttctggcgcagatcaaggccaattattcg
tctggagcggacagttcatctgatgatgaaaacgcagatggggattcaacaaagaaaggg
aaaaatggcactaagaagcgagacgaaagcgaaaatgaggacgaggatgaggacgaaacg
tcagactctggctcagatgttgaagtgaagaaaggtggacgcaggcaccgtttgttgagt
aagaagttgactctaagcgaggcagactctgatgacgagaccacagtcaaaaacaagaaa
gaatccaaaaagagaagcagacggaaagtgggcagcgacgattcggcagattcagacttt
gagcagtcgcgctccggctccagtgatgcatcagcgctcagtgaggccgtgagtgaagaa
gacgacgatgacgaaaagagcaataaacgcaaaacacggtcgtccaataaagctggcaag
gacggtgagagaagttaccagaaagaaaagaagaaacgacggcgcattaaggttcaagac
tcctcatccagtggcaagagcggaggggaagaggatggagaagatgaagacgacgataaa
ggaacacccaaaggtcgcaagaagattcgcaagatcattaaagatgacaaactgcggaca
gagacgcgggatgctctgaaggaggaagaggagaggaggaaacgcattgctgagagagag
cggttgagggaaaaactacgagagactattgtggtggaggagtcatcgcaggtcacgtgt
cccatcaccacaaagctggtgcttgacgaggacgaggagaccaaggaaccattagtgcag
gttcacagaaacctggtgaccaaactcaaaccccatcaggtggatggtgtgcagttcatg
tgggactgctgctgtgagtcggtgaagaaggtggagaagtctagtggctccggctgtatt
ctggcccactgcatggggctggggaaaactctccaggtggtgacgtttctccacactgtg
ctgctctgtgagaagctgaacttcactacagctctggtggtgtgtcctctcaacactgtg
ctcaactggctcaatgagtttgagaagtggcaagaaggcctgacggacgaggagagttta
gaggtgacagagctggccacagtcaagagacctcaggagagagcgtacgctttacagcgc
tggcaggaggatggtggcgtcatgatcataggctatgagatgtaccgcaacctcacgcaa
ggacgaaacatcaagagcaagaagctgaaagaagtctttcagaaaacactagttgatcca
ggtccggattttgtcatctgtgatgaaggtcacattctgaagaatgaagcatctgctgtc
tccaaagccatgaactccatcaggactcgtcggcgagtggtgctgacaggaactcctctg
cagaacaacctgatagagtatcactgtatggtgaccttcatcaaggagaacctgctggga
tcagtgaaggagttcagaaaccgcttcatcaaccccatccagaacggccagtgcgctgac
tccacgctcattgatgtccgtgtcatgaagaaacgcgcacacatcctctacgagatgcta
gcaggatgtgtccaaagaagagactacactgcccttaccaaattcttgccgccaaaacac
gagtatgtgttagcgatacggttaacacccattcagtgcaagctttaccgatactatctg
gatcacttcacaggtgtcggttctgccttggagagcggaagaggccgtgcggggaccaaa
ctcttccaggatttccagatgctcagcagaatctggacccatccgtggtgcctccagctg
gactatatcagtaaagaaaacaagggatacttcgacgaggacagtatggaggagttcata
gcctcagagactgaggagtcgtccatgagtttgacctctgaagatgagaagcccaaaaga
aagaagaaacgaggcaaaggtaaagagcagagctcagacaagtccgacagcgatgacctg
gaagtgattaaggagtggaacaccagctctcgtggaggaaaccccgaggggcggaacaga
gcagaacctgtggaagaggttcggccgtcaaattcaggtcctggcagcccatcgccggac
tggtacaaagagtttgtgaccgagccggattctgaggtgctggagcattctgggaaaatg
gtgctgctttttgagatcctccgcatggctgaagaagtggaagagaaagtgttggtgttc
agccagtctctcatttccctggacctcattgaagatttcctggagttggcaggcagagcc
aaagaggaaggaaagctttcgccgtataaaggtgagggcaagtggttcagaaacattgac
tactatcgtctagatggttcaacgaacgccacgaccaggaagaaatgggcagaggagttc
aatgacaccactaatgttcggggtcgattgttcctcatttcaaccagagctggttctctt
gggatcaacttggtagctgcaaacagggtcataattttcgatgcctcatggaacccatcc
tacgacattcagagtattttcagagtctatcgcttcggccaagtcaagacagtgtttgtc
tacaggtttttggctcagggaaccatggaggacaaaatctatgaccggcagatcgccaaa
cagtcgctgtccttcagagttgtagaccaacagcagattgaacgccactttaccatgaac
gaactgacggagctctacacgttcgagcctgaccagctggacgatccttctgagaagaag
agcaagcgggccacacccatgctgccaaaggatcctttcctggcagaactccttcacagt
tacaaagatcatatcgttggctaccacgagcatgactctttgctggaccacaaggaggaa
gaggcactgagtgaggaagatcgcaaggcagcctgggccgaatacgaggcagaaaagaag
ggtctgtccatgcgtttcaaccagccgtcctattctcagatgggcgtgggagcgggacca
aactcctacttccccttcaacgtggctgctttggcctccatgagcaaccagcagttggag
gagttgattaaccagggccggcagaaagtgatggaagccactaatgctctgaagtcagtg
cccagggaaccactggaggacatcatcgcgcaagtgtggaaggagaatcccagtttaccc
gagaaccaggttcagtccatggctcttgggaggcaggccggctacgaactggagatcaaa
cacagggaggctgtttaccgtgatgtcctcggcaagcaacaaacgctgatgatgtacgtg
cagaaggtgatcgccaaccgtaaggtgcaggagcagcagatggccatggcgagacaggga
atgctgctcaaccagctggccatgcagaacggtcttacaggccccatgaatcagatggat
ctgctggggttgtaccagcagctcggggctctccagggcctcccctcctcacagctgggc
aagaacccgggtccgtctaagggcctgtag
DBGET
integrated database retrieval system
