Garra rufa (doctor fish): 141287933
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Entry
141287933 CDS
T11039
Symbol
arhgef6
Name
(RefSeq) rho guanine nucleotide exchange factor 6 isoform X1
KO
K05729
Rho guanine nucleotide exchange factor 6
Organism
grf Garra rufa (doctor fish)
Pathway
grf04518
Integrin signaling
grf04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04518 Integrin signaling
141287933 (arhgef6)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
141287933 (arhgef6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141287933 (arhgef6)
Membrane trafficking [BR:
grf04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
141287933 (arhgef6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF67_u2
betaPIX_CC
RhoGEF
SH3_2
CH
SH3_1
SH3_9
RhoGEF67_u1
PH
SOS1_NGEF_PH
ENTR1
CAMSAP_CH
ZapB
Motif
Other DBs
NCBI-GeneID:
141287933
NCBI-ProteinID:
XP_073676140
LinkDB
All DBs
Position
16:33129674..33180334
Genome browser
AA seq
795 aa
AA seq
DB search
MNPEEQTVTWLITLGVLNSPKKNIADPEEFLKTSLRDGVVLCKLMERVLPGTILKYSAEP
RSEADCIANIREFLKGCQSLKVEGFDPENLYTGENFNKVLSTLSAINIATQDTPKRSCPQ
SSASAPSLSAPTQAVPTLKSSRSLRRQSKAVEMSENGGGGQLVVKARFNFKQNNEDELSF
SKGELIHVTRQEEGGWWEGTLNGKTGWFPSNYVREVKPCEKPISPKAVKGLDVPQLTKNY
YNVVVQDISEHEREFIKELQTVLGCYLRPLQASDKLSSADCSSLNGNLEDILSFQQGLCL
ALEECSKMPEGQQRIGGCYLNLMCQIRTLYLSYCSSHPSAVCVLTDHSEELDKFMESQGA
SAPGILTLTTSLSRPFMRLDKYPTLLQELERHVEEAHPDYSDILKATAAFKNLVTQCQDL
RKRKVLELQILSEPVRGWEGDSMKSLGQVLYMSQVHVQSSSNEEKEERYLMLFPNVVVML
SASPRMSGFIYQGRLPLTGTTVTKQPEDAETGLYAFEITGGTIDRTMVFCSSAQEQLDWL
EHLHAYTKEGSPVGTILKSVEGKPTTMTGTSSHHLHSFGTAVANRGPLEPPKSTKPWSLS
CLRPAPPLKPSAALGYKERMSYILKDSSKSPRPRPKFLPKRKTERKPSDDEFLLRKSTGT
AALEEDAQILKVIEAYCTGASLHQSTTAVRKECIPQVLLPEEEKIIVEEIKSNGQTIIEE
KVPTGHGISGISWNFKRSLVDAVYALKDEVHELKKENKWMKQCLEEEQKSRKELERVVRK
LAKQKNDCSWDEGGH
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccgaggagcagactgttacgtggctaataacattaggcgtgcttaattcaccc
aaaaagaatatcgctgatccggaggaatttctgaaaacatcgcttagagatggggtcgtc
ctgtgtaagcttatggagcgagtgctacctggaaccatcttaaagtattcagctgaaccc
agaagcgaagcggactgcattgcaaacatacgagagtttctaaaaggatgccagtctcta
aaggttgagggctttgatccagaaaatttatatactggggagaacttcaacaaggttctg
tcaacactctcagcaataaacatcgcaactcaagatacccctaaacgatcatgtccacag
tccagtgcctctgctcctagcctgtcagcccctacacaagctgttcccaccttaaagtcc
agcaggtctttacggaggcagtcaaaagctgtggaaatgtcggagaatggaggtggtggg
cagctggtggtcaaggcacgcttcaatttcaagcagaacaatgaggacgagctgtctttc
agcaagggtgagctgatccatgtcacacgccaggaggaaggtggatggtgggagggaacc
cttaatggcaaaaccggctggttccctagtaattatgtccgagaggtcaagccatgtgag
aaaccaatttctccaaaagcagtaaaaggacttgatgttcctcagctcactaaaaattat
tacaatgtggtggtgcaagacatctcggagcatgagagagagtttatcaaagagctgcag
acggtactgggctgctacctgcgccctctacaggccagtgacaagctgtctagtgcggac
tgctccagtctgaatggaaatttagaggacatcctctcgttccaacaggggctgtgtctt
gctttagaggagtgctccaagatgccagagggccagcagcggattggtggctgttacctg
aacctgatgtgtcagatcagaacgctttacttgtcctactgctccagccatccttctgca
gtctgtgtgctgactgatcacagtgaagagctggacaagttcatggagagtcaaggtgcc
agtgctcctggtatcctaaccctgaccaccagcttgagcagacccttcatgaggctcgac
aagtaccccaccctcctgcaggagcttgagcgacatgtggaggaagcgcatccagattac
agtgacattctcaaagcaacagctgcatttaaaaatcttgtgactcagtgtcaagatctg
cgaaaaagaaaagtcctggagttgcagatcttgtcagagccagtgcggggctgggagggc
gacagcatgaagtcactgggtcaggtgctctacatgtcacaggtccatgtccagagcagc
tcgaatgaggaaaaggaagagcgatacttaatgctgtttcccaatgtggttgtcatgctg
tctgccagcccaagaatgagtggttttatttaccagggacgtctaccactgactggaacc
actgtaaccaaacagccggaggatgcagagacaggcctttatgcttttgaaatcacaggg
gggacgatagatcgcaccatggtgttctgcagcagtgcacaggagcagctggattggtta
gagcatcttcatgcttacaccaaggaagggagtccagtcggaacaatattgaagagcgtt
gagggtaagcctacaaccatgactggcacgtcgtcccaccacttgcacagtttcggtact
gctgtggctaaccgaggtcctctcgaaccccccaaatccaccaagccatggtccttaagc
tgtctgagaccggcgcctcccctcaaaccctccgctgcgctaggttataaagagaggatg
tcttatatcctgaaggactctagtaaaagccccagaccgagacccaagttcctcccaaag
agaaaaacggagagaaaaccatcagatgatgagttcctgcttagaaaaagtacaggcaca
gcagcgctagaggaggatgctcagatactcaaagtgattgaggcctattgcaccggagcc
agtctccaccagtccaccacagctgttcgtaaggagtgcatcccccaggtcctgcttcca
gaagaagagaagattattgtggaggagatcaagagcaatggccagacgatcattgaggag
aaggttcccacgggtcatggaatttctggaatatcatggaattttaaaagaagtcttgtt
gatgctgtttatgctctaaaagatgaagtccatgaattaaaaaaggagaataaatggatg
aagcagtgtttggaagaggaacagaagtcccgtaaggagctggagcgtgtagtcagaaag
ttggccaagcaaaagaatgactgttcctgggatgaaggaggtcactaa
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