Garra rufa (doctor fish): 141287962
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Entry
141287962 CDS
T11039
Symbol
nsd1a
Name
(RefSeq) LOW QUALITY PROTEIN: histone-lysine N-methyltransferase, H3 lysine-36 specific
KO
K15588
[histone H3]-lysine36 N-dimethyltransferase NSD1 [EC:
2.1.1.357
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00310
Lysine degradation
grf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
141287962 (nsd1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
grf03036
]
141287962 (nsd1a)
Enzymes [BR:
grf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
141287962 (nsd1a)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
141287962 (nsd1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWWP
PHD-1st_NSD
SET
C5HCH
AWS
PHD_NSD
PHD
PHDvar_NSD
PHD_2
Motif
Other DBs
NCBI-GeneID:
141287962
NCBI-ProteinID:
XP_073676182
LinkDB
All DBs
Position
16:complement(21380959..21405730)
Genome browser
AA seq
2121 aa
AA seq
DB search
MNQSYKVAGRDGSECHGDPQETKALDGRISSCGHQSTKRQGDQGPAMHFLNSGYKLSASP
FTYNHRESTSNYSPLRRLQDLTTMVNHADMSLQDKDFHGRSKLLMHNPNGGSEYGIGLYQ
TSNSQGNTDRTTIQDLDKNGFSPVSSDSLEHFSPIPSGFLHFESNLFDSGDSKDNDEEEH
NAVALFKDASKKCQKRNLANTKAPSSHRLDLSTNKHGSCNLVSKNTVKSDPPAISSHLPV
EVMMEDFDSMDDYSDSDCDLPSTENSASIFNAGLSKRPNSPSDSHSNPSNSPKKKQLPGI
KYSVDDVVWAKFNRRPWWPCHVTTDPQIEVHTKMKDPSRRPCRLYFVRMFGEIVDQAWVP
AKATFPFEGGHQFEKLPVLRRRGKQKDKDYKYTVPKRLMSSWKTGVLEAEAALTKRLNSE
PPLTLIRDVHIPITEEKAPKSPVCPTSTTQSTSSSSRLSNGLDAIKNKVKPVTGSKKTTK
ATKKNSSTVKSPVKRTENSLSSKPSSDSYKPSTAAERHKLDPLDSPYSDIDSVPRILCPK
RSGDLPLVEVAKELSTKPKKVQPSKKMKKANVDKPVKKTEAGSKCTTNSKLKKSTPKEKT
LRATNSRQKESSSPGSSDGSFAMHSFYLPASSGLMSRALAAREETEEKDSNHEPKSPSPC
AGDEHSEFYNKCVSPTERSELSKQQWQVKTEASEKSTDASVSHTPPKPTLKFTRIRNEKN
GVHKGPRHKGSKSDVNETSLNSVKVKNESMISDASSSSIPSPSISPMDAFQDVKELSFRS
LVKEECSSGEPSLRADSNYKFSTFLMLLKDLHDSREKDGKPLTLPPTSPSSLIKEEPSLI
PPGEETTNEVLCEKDWKAVADQNSRQGKTLTPNSSKQNKAKPKSSVKKETQKHDGGNNLA
PPLKKLNSSTGLDALEKSLPLLGELSSSHHDAVPDVCGKGTISKVAPKKRWQTFESAIGK
STKPKSEPVGLNKDVAKESIELNGVFKDSLEETAHSDIPDKKDASENKRLRKPSKRLIEC
SEDYEQIFSTKKKTKKTPESCKTGSLIANTNTDQPAPEQFAPDALSSSPEKPSEQATSEE
QKEPADGLVSQHTSTPLSPSCGGPSPNRESCEKKSAPSDRKRPRKTVHKILDSAAEGDSA
KIPKKEQIKQENQDSKQQDNSPDESDVKDLQKPEEPEPKPSSPCAASAAAQSEDEIRTSS
PIQQDTPSVCQIQLEGEQCSPSKPEAKELHTNGEDSLISEVFGAGLNDSAFSSRDSLSGD
LSGLSTNRKSGEKGGGASLKENVCQVCEKTGELLLCEGQCCGAFHLQCIGLTETPKGRFI
CQECKTGVHTCFVCKKPDKEVRRCMIPVCGKFYHMECILKYSPTVAQNRGFRCSLHVCLA
CFITNPANPGISKGRLTRCVRCPVAYHANDYCMAAGSVPLANNSFLCPNHFTPRKGCKNH
EHINVSWCFVCSQGGSLLCCESCPAAFHRECLNIDMPQGSWFCNDCRAGKKPHYKDILWV
KVGRYRWWPAEVTQPKNVPENIYRMRHEVGEFPVHFFGSKDYVWTYQARCFPYMEGDANN
KEKMGKGTDAVYKKALNEAAERFKELLDEKETRQLQEDRKNDKKPPPYKHVKVNKPIGKV
QIITADLSEIPRCNCKKTDENPCGIDSECINRMLMYECHPQVCPAGDSCQNQSFTKRQYT
EVEIFRTLARGWGLRSISDIKKGAFVNEYVGEVIDEEECRARIKHAQENNICNFYMLTLD
KDRIIDAGPKGNQSRFMNHSCQPNCETQKWTVNGDTRVGLFALEDIPKGVELTFNYNLEC
LGNGKTVCKCGASNCSGFLGVRPKNQPSSDDKVRKLKKKVAVKRKSQSEVTKEREDECFF
CCDGGQLVSCKKPGCPKVYHADCLNLSKRPAGRWECPWHQCNECGREAASYCEMCPNSYC
KVHREGMLFISKLDGKLSCSDHDPCGPDPLEPGEIREYVPGTPILPPPTNMAVSGRISLP
ALPPAAPLFIPAPNRPAFQSQRDPYADEVVDNVVLQPSSPSKDIKEEDMSDEGEVLEGVI
GDEGEDEGLEVVDDDDDDDEKMDCEGMGLEDEEEEKVDRGESEEDWGDECVDADYEDTED
LGEVEGDDQESSWDEFVEGEK
NT seq
6366 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagtcctacaaagtggctggcagggatggctcggagtgtcatggtgatccacag
gagaccaaggcgcttgatggccgcatcagctcctgtggacaccagagcacaaagcgacag
ggggaccaggggcctgccatgcatttcttaaactctggctacaaactgtccgcatcgcca
ttcacgtacaatcatagagaatccacctccaactacagtccgctgaggagacttcaggac
ctgaccactatggtgaaccatgccgacatgagcttgcaggacaaggactttcatgggcga
agtaaattgctcatgcacaatcccaatggcggaagcgagtacggaataggcctttatcaa
acgtccaattcgcaaggaaacaccgacaggactactattcaggatctggacaaaaatggt
ttctcaccagtaagctctgatagcttggaacacttttcacccatcccaagtggatttttg
cattttgagtcgaacctgtttgatagtggggacagcaaggataatgatgaggaggagcat
aatgcggtggcactgtttaaagacgcgtcaaagaaatgccagaaacgaaatctggcaaac
acaaaggctccgagcagccacaggctggacctaagtacaaacaaacatggaagttgtaac
cttgtttctaaaaatacagtgaagtctgaccctcctgctatttcctcacatttgcctgtc
gaggtcatgatggaggattttgacagtatggatgattattcagacagtgactgtgatctg
cccagcactgaaaacagtgcttcaatattcaacgctggtctctcaaaaagaccaaattca
cccagtgactcccattcgaatccttccaacagcccaaagaagaagcagctcccaggtata
aagtactctgttgatgatgttgtgtgggccaaattcaaccgcagaccctggtggccctgt
catgtaaccactgacccacagattgaagtccacaccaaaatgaaagatcctagtcgtcgg
ccgtgccgtctctattttgtcaggatgtttggggagatcgtagaccaggcttgggtcccg
gcaaaagccacttttccttttgaaggaggtcatcagtttgaaaaactgcctgtacttaga
cggagaggaaaacagaaggacaaagattacaaatacactgttcctaagcgtctaatgtca
tcatggaaaactggtgtcttggaggcagaggcagcactgaccaaacggttaaacagcgaa
cctccattgactttaattcgggatgtgcacatacctattacagaggaaaaggcaccaaaa
agtcctgtttgcccaacatctactacacagtccacatcatcaagctcacgtttgtccaat
ggactagatgccattaagaacaaagtaaaacctgtcactggaagcaaaaagacaactaag
gcaactaagaagaacagctcaactgtaaaatctcctgtgaaacggactgaaaacagttta
tcatctaaaccttcatcggacagctacaaaccttccacagccgctgaacggcacaaacta
gaccccctagatagtccgtattcagatattgactctgtcccaagaattctgtgccccaaa
cgttcaggggacttgccgctggtggaggtggcgaaagaattgagcactaaacctaagaaa
gtacagccaagtaaaaagatgaaaaaagccaacgtggataagccggtaaagaaaacagag
gctggttcaaaatgcacaacaaacagtaagctaaagaagtcaacgcccaaagaaaaaaca
cttagggctacgaactccagacagaaggaaagcagttccccagggtcctcagatgggtct
tttgccatgcactctttctatttgcctgccagcagtggcttaatgtcaagagcacttgcc
gccagagaagaaaccgaggagaaagattcaaatcatgagccaaaatctccctcaccatgt
gctggtgatgaacactcagagttttacaacaagtgcgtatcccccacagagcgttcagag
ttgtcaaaacaacaatggcaggtaaaaacggaggccagtgaaaagtccacagatgcctct
gtctcccacacacccccaaaaccaactctaaagttcacaagaatccgaaatgagaaaaac
ggcgttcataaaggacctcgacataaaggttccaagtcagatgtgaatgaaacctcgctc
aattccgttaaagtaaaaaacgagagtatgatctcagatgcttcatcttcgtccatcccg
tctccctcgatctctcccatggatgctttccaggatgtgaaggagctttctttcaggtct
cttgtcaaagaggaatgcagctcaggagaaccttcactccgtgcggactcaaactacaaa
ttcagcactttcctaatgctcctgaaggatctgcatgacagccgggagaaggacgggaaa
cctttaacccttcctcccacatctccatcctctctcatcaaagaagaaccttctcttatc
ccacctggagaagaaacaacaaatgaggtgctttgcgaaaaggactggaaggcagttgcg
gatcagaacagtcgacagggaaagacattaacgccaaacagttcaaaacagaacaaggcc
aagccaaaatcatcggtgaaaaaggagacgcaaaaacacgatggtgggaacaatttagct
cctccactgaaaaaactgaactcatcaacaggtttggatgcacttgaaaagagtttgcct
ttgttaggggaactttccagctctcaccatgatgctgttcctgatgtctgtggcaaaggc
accatctccaaggttgctcctaaaaagcgatggcaaacttttgagtctgccattgggaag
agcaccaagccaaaaagcgaaccggttggtttgaataaagatgtagcaaaggagtccata
gagctaaatggagttttcaaagacagtcttgaagaaacggctcattcggacatccctgat
aaaaaagatgcctcagaaaataaaaggctaagaaaaccaagcaagaggttgattgaatgc
agtgaagattatgaacagatattttccacaaaaaagaaaacaaagaaaactcctgagtcc
tgtaaaacgggatctttgatcgccaacactaacactgaccagccggcacctgaacagttc
gcacctgatgctttaagctcttcacctgaaaaaccctctgagcaagccacatcagaggag
cagaaagaaccagcagatggtcttgtatcacaacacacttcaacaccattatcgccatcc
tgtggaggcccatcaccaaacagagagtcatgtgaaaagaaatctgcaccctcagataga
aagagaccacgtaagactgtgcataaaattctagacagcgccgctgagggggattctgcg
aagatcccaaagaaagagcagattaaacaagaaaatcaggacagtaagcaacaagataac
agcccagatgaatcagatgtcaaagatttgcagaaaccagaagagcctgaacctaagcca
tcaagcccgtgtgctgcatcagcagcagcacaaagtgaggatgaaataagaacatcgtcc
ccaatccagcaagacacacccagtgtttgccagatccagcttgaaggagagcagtgcagc
ccgtcaaagcctgaggcaaaggagttacacacaaatggcgaggactctctgatctctgag
gtttttggtgcaggacttaatgacagtgctttttcaagcagagattctttatcaggtgac
ttatcaggactctcaaccaatagaaaatcaggggagaaaggtggaggtgcgtcattaaag
gagaatgtttgccaggtatgtgaaaaaacaggtgaactgctcctctgtgaggggcagtgc
tgtggtgccttccatctgcagtgcatcggcctcactgagacccctaaaggccggtttatc
tgccaagagtgtaagacgggtgtgcacacatgttttgtgtgtaaaaagcctgacaaggag
gtcaggaggtgtatgatccctgtttgtgggaagttttatcacatggagtgcatactgaaa
tattcccccaccgtcgctcagaaccgtggcttccgctgctccctccacgtctgtctggcc
tgctttatcactaaccccgccaaccctggtatctccaaaggccgtttaacccgctgcgtc
cgctgccctgtggcctaccatgccaatgactactgtatggctgctggcagcgttccattg
gccaataacagcttcttgtgccccaaccacttcactccacgcaaagggtgcaaaaatcat
gaacacattaatgtcagctggtgttttgtgtgttctcaaggaggaagtctgctctgctgt
gaatcttgccctgctgcctttcaccgtgagtgtctgaacattgacatgccccagggaagc
tggttttgtaacgactgtcgagcgggaaagaaaccccactacaaggacattctgtgggtc
aaagtcggccgctacaggtggtggcccgctgaagtgactcaaccaaaaaacgttcctgag
aacatctaccgtatgaggcatgaggtgggagagtttcctgtgcacttctttggctccaaa
gactacgtgtggacatatcaagctcgctgttttccctacatggaaggggatgctaacaat
aaggaaaaaatgggaaagggtacagatgctgtctataagaaagctttaaatgaagcagct
gaaagattcaaggaactgctggatgagaaggagacgagacagcttcaagaagacaggaag
aatgacaagaaaccaccgccatataaacacgttaaggtgaacaaaccgatagggaaggtg
caaatcatcacggcagatctgtctgagatcccacgctgcaactgcaaaaagacagacgag
aatccatgcggcattgactcggagtgcatcaaccgcatgctaatgtatgagtgtcatcct
caagtgtgtccagcaggggacagctgtcagaaccaatcctttaccaaacgccagtacacc
gaggtagagatcttcaggacgctggcgcgtggttggggtttacgcagtatttctgacatc
aagaagggagcttttgtgaacgagtatgttggagaggtcattgatgaagaggagtgtcga
gccaggatcaaacatgcgcaggaaaacaacatctgtaacttctacatgctgacattggat
aaggatcggatcatagacgccgggccgaagggaaaccaatcacgttttatgaaccacagc
tgccagccgaactgtgagacacagaagtggacggtgaatggagacaccagagtcgggctg
tttgcgttagaagacattcctaaaggtgttgaactcacttttaactataacttggagtgt
cttggtaatgggaagacagtgtgtaagtgtggagcatccaactgcagcggattccttggt
gtcagaccaaagaatcagccctcgtctgacgacaaggtgcggaaactgaagaagaaggtt
gcggtgaagcgtaagagccagtcggaggtcaccaaggagcgggaggatgaatgtttcttc
tgttgtgatggagggcagcttgtgtcttgtaagaagcccggctgccctaaggtctatcat
gccgactgtctgaacctgtccaagagacctgcaggccgctgggagtgtccgtggcatcag
tgtaatgagtgtggacgcgaggcagcatcctactgcgaaatgtgtcccaactcctactgc
aaagtgcaccgtgagggaatgctgttcatatccaaactagacggcaaactgtcctgcagc
gaccacgacccatgtggccccgatccactagaaccgggagaaattcgagagtatgtgccc
ggtacgcctatcctaccccctccgactaatatggcagtatcgggcaggatatccctgcct
gccctaccgcctgctgctccgctcttcattcccgcccccaacagacctgcgttccaatcc
caaagagacccgtatgcagacgaggtggtggacaacgtggttctacaaccctcttctcct
tcaaaggacatcaaggaggaagatatgagcgatgaaggcgaggtgctcgaaggggtgatc
ggggatgaaggggaagatgaaggcctcgaggttgtggatgatgatgatgatgatgatgag
aaaatggactgcgaagggatgggactcgaggacgaggaggaagaaaaggtggaccgaggc
gagtctgaagaggactggggagatgaatgtgtagatgctgactacgaagacactgaggac
ttaggggaagtggagggggatgaccaggaatcatcatgggatgagtttgtcgaaggagaa
aagtga
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integrated database retrieval system
