Garra rufa (doctor fish): 141287965
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Entry
141287965 CDS
T11039
Symbol
prom1a
Name
(RefSeq) prominin-1-A
KO
K06532
prominin 1
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
grf04147
]
141287965 (prom1a)
04090 CD molecules [BR:
grf04090
]
141287965 (prom1a)
Exosome [BR:
grf04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
141287965 (prom1a)
CD molecules [BR:
grf04090
]
Proteins
141287965 (prom1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Tweety
ATP1G1_PLM_MAT8
ApoLp-III
Motif
Other DBs
NCBI-GeneID:
141287965
NCBI-ProteinID:
XP_073676184
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Position
16:23018857..23094356
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AA seq
894 aa
AA seq
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MLWKTGLIFLCWGLTSGELQDRQSDSPASPARRTLDFGFVPSGVYDTVAYYEPGAIGILF
NMMHAFLYVVQPNPFPEDLVIRVAKDKFGAIQSEYQKPENIVLTLQVIYYEIGFVVCAAL
GLLFTVLLPLVGLLFCLCRCCDNCGGEMHQRQRKNADCLRGLLTTLLLTTTFIITXXXLC
AYAANQNLSSQLKSMRRLVKSNLKDLHTFANQTPAQIDYLISQYGIVKHQVLYDLENVGV
LLGGRIHEELGKDVQPALDTALSMTGTMRDTKDALENVSLTLETLQEGTVKLQANLSQVR
SSLSNALNDPVCMDGRSLEICLNIRGTLPRLEIAANYSSLPDVTTQLDKVNEVLKTDLGQ
IVEKGVASFNDTPTLVTDQTRNIVEAVKVFLDDIGSNITTFTKLFPVHSTLTNFTRMISH
THSQIEDIYPQVDQMDFYRWICCITLCCMVVLILAFNFLGLLCGILGFDRHATPTTRGCV
SNTGGNLLMAGVGFSFLFSWVLMGVITALFLVGGNLEKLVCEPFQTRQLFKVVDTPNLVN
SAWKNFIPGYLYNDPEMDLTAYSVYSNCKDNRGIYSALHLDKIFNISAFFNTSVYSKDVS
RKFEGMKVDLRGIILLESEGKQNLISFTETGINEIDFAAYLEEVNKGVTRINLVDFASQL
DAQADQLSKGTLQTSLKGHANTIRQIHIQQVIPLEQSMKYVKARSTLNQSIRLLERTSSD
LPVRVRDVLDAVDAAQFLISQNASFVINQETEKYKQTIIGYFKQYIDWIRSSLALEVATC
KPLSNIVDTAEILGCSFLLDSMNTFWFGLGCSTLFLLPSIILSIKLAKFYRRMDTEDVYD
DIETIPMKTMEIGNNGYYNEHLEGIQNPVMASIPTYDTMTRFPRASAPPRNADW
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggaaaacgggactaatttttctgtgctggggcttgacgtccggggaactccag
gacaggcaatccgacagtcctgcttctccagctcggcgaactttggatttcggcttcgtc
ccctccggagtttacgataccgtcgcctattatgagcctggggccattgggattttattt
aacatgatgcacgctttcctctatgtggttcaacccaacccgtttcctgaagatctcgtc
attagagtggcgaaggataaattcggagccatacaatccgagtaccagaagccagaaaac
attgttctgacactccaggtgatttattatgagattggttttgtggtgtgcgcggcactg
ggcctgctgttcaccgtgctgctgccgctggtggggcttctcttttgtttgtgccgctgc
tgtgataactgcggaggagagatgcaccagagacagcggaagaacgcagactgccttaga
ggactgctgaccacgctgttactcaccaccacattcattatcacnnnnnnnnnnctttgt
gcatatgcagccaatcaaaacctgagttctcagctgaagagcatgaggaggctggtgaaa
agtaacctgaaagacctgcacaccttcgccaatcagacccctgcacaaattgattacctg
atctctcagtacggcatcgtgaagcaccaggtgctgtatgacctggagaatgtaggtgtg
ctcttgggtggaaggatacatgaggagttgggaaaagacgtacagcccgccctcgacaca
gctctcagcatgactggaacaatgcgagacactaaggatgctctagagaatgtgagtttg
accttagagactttgcaggaaggaacagtcaaactgcaggctaacctcagccaggtgcgc
agcagccttagcaacgctctaaacgatccagtctgcatggatggacgctcattggagatt
tgtctcaacatacggggcacccttcccaggctagaaattgcagccaactactcatcgttg
cctgatgtaaccacccagttggacaaagtgaatgaagttctaaagacagatctcggccag
attgtggaaaagggcgttgcatcattcaatgacactcccaccttggtaacagatcaaacc
cgaaatattgtggaagcggtgaaggtttttctggacgacattggatcaaacatcaccact
ttcaccaagctcttcccggttcacagcactctgaccaacttcaccagaatgatctctcac
acacactcacagatcgaggacatctaccctcaggtggatcagatggatttctacaggtgg
atctgttgtattaccctgtgctgtatggttgtgcttatcctcgccttcaatttcctgggt
ttgttgtgtggtattctgggattcgacaggcacgccactccaaccacacgtggctgtgtt
tctaacacaggaggcaacctgctcatggctggtgtgggcttcagcttcctgttctcctgg
gttctcatgggagtgataacagctctgttcttggtgggtgggaatctagaaaagcttgtg
tgtgaaccctttcaaacccgacagctgtttaaggtggtagatacacccaacttggtcaac
tctgcttggaaaaacttcataccaggttacctgtacaatgaccctgagatggaccttaca
gcatattctgtctacagtaattgtaaggacaacagagggatttactcagctcttcatctg
gataagatctttaacatctctgccttctttaacaccagtgtttactccaaggatgtgtcg
aggaagtttgaagggatgaaggtggacctgcgtggcattattcttctggagtcagaaggc
aaacagaatctcatcagcttcactgaaactggcattaatgagattgactttgctgcctat
ttggaggaggttaacaaaggagtgactcgcattaatctagttgatttcgctagtcaactt
gatgctcaagctgatcagttgtctaaagggaccttgcagacgtcattaaagggacatgct
aatactataagacagatccacatccaacaagtcatcccactggagcaatccatgaaatat
gtgaaagcaaggagcacacttaatcagagcatcagacttctagagagaacatcctcagac
ctgcctgtcagagttagagatgtactagacgccgttgatgccgcccagttcctgatttca
caaaatgcatcatttgtgattaatcaggaaactgagaaatacaagcagactattattggc
tatttcaagcagtatatcgactggatcagatcgtctctggccctggaggttgctacctgt
aaaccactcagcaacattgtggacacagctgagatcctaggctgcagtttcctgctggat
tccatgaacacattctggtttggattaggctgttccacactgtttctgctccctagcatt
atcctctccatcaaacttgccaagttctaccgcagaatggacacagaggatgtatatgac
gacattgagacaattcccatgaaaactatggaaattggtaataatggttattataatgaa
catttagaaggtatccaaaatcctgtaatggcaagcatccctacctatgacactatgact
cgattcccacgggcctctgcgcctccgcgtaatgccgactggtga
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