Garra rufa (doctor fish): 141287979
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Entry
141287979 CDS
T11039
Symbol
tbc1d9b
Name
(RefSeq) TBC1 domain family member 9B isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141287979 (tbc1d9b)
Membrane trafficking [BR:
grf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
141287979 (tbc1d9b)
Endosome - Golgi transport
Rab GTPases and associated proteins
141287979 (tbc1d9b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_6
EF-hand_7
Ric8
Motif
Other DBs
NCBI-GeneID:
141287979
NCBI-ProteinID:
XP_073676201
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All DBs
Position
16:complement(12820027..12852657)
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AA seq
1226 aa
AA seq
DB search
MWITPEEVLLANALWVSERANPYFILQRRKGHGRGGGITGLLVGTLDVVLDSSARVAPYR
ILHQTGESQIFWNIACGSSRKEITEHWEWLETNLLQTLSIFDNDDDITTFVKGKIQGIIA
EENKSGKPQEDEDPGKFREAELKMRKLFGMPEEEKLVNYYPCSYWKGRVPRQGWIYLSVN
HLCFYSFLLGKEVSLVVQWTDVTQLDKNATLVFPESIRVSTRDTEHFFSMFLNINETFKL
MEQLANIAMRQLLDNESFSADRSLPKPCKTLKNVSALKRDLDARAKNERYRALFRLTQDE
RLDGHTDCTLWTPFAKMHVVGQMFVSNNYICFASREEDLCQLIIPLREVTIVEKADSSSV
LPSPLSISTKNKMTFLFANLKDRDFLVQRISDFLQRTPDRPCGLNTQSENPSPSTPPSLP
PSPPVLGFGEMPQNQHYSSSLPTAIKGLLQIYQQDVPEELGPKVTREKMKEESWNIHFFE
FGRGVCMYRTSKTRELVLNGIPESLRGELWLLFSGAQNEMATHPGYYASLVEQAMGKCTL
ATEEIERDLHRSMPEHHAFQNEMGIAALRRVLTAYAYRNPSIGYCQAMNIVTSVLLLYCT
EEEAFWLLVALCERMLPDYYNTRVVGALVDQGVFEELTRECLPLLYEHMQDLGVISTISL
SWFLTLFLSVMPFDSAVLLVDCFFYEGIKVIFQVALAVLHANMDQLLSCSDEGEAMTILG
RYLDNVVNKQTVSPPIPHLHALLTSGNNPPPEIDVFELIKASYEKFGSLRADVIEQMRFK
QRLKVIQSLEDTAKRSVVRAIMTESAFTIEELEELYVLFKAKHIMSCYWGASSTAAERHD
PSLPYLEQYRIDCGQFVQIFSALAPWSCGLHTNTLSSRLFRLLDQNKDSLINFKEFVTGL
SGMYHGDMTEKLKLLYKLHLPPALCPEEAESALEATQFFTDDDTPQDPPFLSHLDFLAQE
VTSGEELKEAGDASTGGDTDEKKDEKPKDYKYYLRMWAKEKEPKKESIKDLPRMNQEQFI
EMCKTLYNMFSEDPMEQELYHGIATVASLLLRIGEVGKKFTNNGGKKPEPQLPTAVDALQ
PEREDSSGEGGSGQSLVSKALAEAQLETPPPTAAGSDEEAKDDTSVSSYSVVSAGSLQCE
DIADDTVLIGCAGGDGTDRRRGSAPDADWSITFEQVLASFLTETSLVDYFEKKHDIQSKI
AACKSLRAVERQTSTSSDHDFSLNTH
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgtggattaccccggaggaggtgttactggccaacgcgctgtgggtgagcgaacgggcg
aatccgtatttcatcctgcagagaaggaagggacacgggcgcggaggaggcatcacgggt
ttgctggtgggtacattggatgtggtgttggactcaagtgctcgtgtggctccgtacagg
atcctgcatcagacgggagagtcacagatcttctggaatattgcttgtggctcgtctcgg
aaggagatcactgaacactgggagtggcttgaaacaaacctactgcagactctgtccatc
tttgacaacgacgatgacatcaccaccttcgtcaagggcaaaatacagggcatcattgct
gaagagaataagagtggcaaacctcaggaagacgaggatcctgggaagttccgagaagct
gagctgaagatgcggaagttgttcggaatgccggaggaagagaagctggtcaactattat
ccctgcagctactggaagggcagagtcccaaggcagggctggatctacctgtctgtaaat
catctctgcttctactccttcctgctgggaaaagaggtttcactagtcgtgcagtggaca
gacgtcacgcagttggacaagaacgccacactggttttccccgagagcatccgtgtgagc
acacgtgacaccgagcacttcttttccatgtttctcaacatcaatgagaccttcaaactg
atggagcagctggccaatatcgccatgagacagctgctggacaacgagagcttctccgcc
gaccgctcgcttcccaaaccctgcaagacactgaaaaacgtctctgcactcaagagggac
ttggatgcacgtgcaaagaacgaacggtacagagctctgttccggctcacccaggatgag
cgtttggatggacacaccgactgtacgctctggacgccattcgctaagatgcatgtcgtc
ggtcaaatgtttgtttctaataactacatctgctttgccagtcgagaggaagatctgtgt
caacttatcattccactgagagaggttactatagtggagaaagcggacagcagcagtgtt
ttgccgagtccactgtcgatcagcactaaaaacaagatgaccttcctgtttgccaacctc
aaagatcgtgacttcctggtacagcgcatctcagacttcctgcagcgcacgcctgacagg
ccatgtggcctaaacactcaatctgagaatcccagcccaagtactccaccctctctgccc
ccgtcccctcctgtcctggggtttggagagatgccccaaaaccaacactacagctccagt
ctgcccactgccataaagggcctgctgcaaatctaccagcaggacgtcccggaggagctg
ggcccgaaagtgacaagagagaagatgaaagaggaatcatggaacatccatttcttcgag
tttggccgtggagtgtgtatgtaccgcacgtctaagaccagagagctggttctgaacggg
ataccggagagtttgagaggagagctgtggctgctgttctcaggtgctcagaacgagatg
gccacacacccaggttactatgccagtttggttgagcaggcgatgggcaaatgtactcta
gcgacggaggagatcgagagagacctgcaccgatccatgcctgaacatcacgccttccag
aacgagatgggcatcgctgccctgagacgagtcttgacggcctacgcttacagaaaccct
agcattggatactgccaggcgatgaacattgttacatctgtcttgttgttgtattgtacc
gaagaggaggcgttttggctgcttgtggcgctgtgtgaacggatgctgcctgactattac
aacactagagttgtaggagcgctggtcgatcagggtgtgtttgaggagctcacccgcgag
tgtttgccactgttgtacgagcacatgcaggatctgggcgtcatatccaccatctctctg
tcctggtttctcacactcttcctgtctgtcatgccgttcgacagcgcggtgctgctggtc
gactgcttcttctatgagggcattaaagtcattttccaggtggcattagctgtgctacat
gcaaacatggatcaactgctgtcctgttcagatgagggagaggccatgactattctgggc
agatatttggataatgttgtaaataagcagaccgtttctccacccattccccaccttcat
gccctgttgaccagtggcaacaaccctccacctgaaattgatgtcttcgagctcattaaa
gcatcctatgagaagtttggtagcctgcgtgccgacgtcatcgagcagatgagattcaaa
caaaggttaaaggtcatacagtcactagaagacacggccaagaggagtgtggtgagagcg
atcatgacagagtctgcgttcactattgaggagttggaagagttgtatgttctttttaag
gctaagcatatcatgagttgttactggggtgccagcagcaccgcggctgagcggcacgat
ccgagtctgccctatctggagcagtaccgtatcgactgcggccagttcgttcagatcttc
tccgctctggcgccatggagctgcggccttcacaccaacaccctctccagccgactcttc
cgcctgctcgaccaaaacaaggactccctcattaacttcaaagagtttgtcactggactc
agtggaatgtatcatggcgatatgacggaaaaacttaaacttctctacaaactccatctg
cctcctgcgttgtgtccagaagaggcagagtcagcgctggaggccacgcagttcttcact
gatgatgacacgccacaggatcctcccttcctgtctcatctggacttcctggcacaggaa
gtaacctcaggtgaggagctgaaggaggcaggagacgcgtcaacaggcggagacacggat
gagaaaaaagatgagaagccgaaggactataagtactatctgagaatgtgggccaaagaa
aaagagccaaagaaagagagtatcaaagatctgcctcggatgaatcaggagcagttcatt
gagatgtgcaagactctctacaacatgttcagcgaagatcccatggagcaggagctgtat
cacggcatcgccacggtggcgagtctcctgctgcgtatcggagaagtaggcaagaagttc
actaacaacggcggcaagaaacccgaaccccaactccccaccgcagttgatgctctacaa
ccagagagggaggactcatccggggaaggaggatcaggccaatccctggtctccaaggca
ctagcagaggcgcagctagagacgccacctccaacagcggccggctctgacgaagaggcc
aaagacgacacatccgtttcgtcctactctgtagtgagcgccggatcgctgcagtgtgag
gacatcgcagacgacacggtgctgatcggctgcgcgggcggagatggaacggatcggagg
cggggcagcgcgccggatgccgattggtcgatcacattcgagcaagttttagcatcgttc
ctgacggaaacatcactagtcgactacttcgagaaaaaacacgacatccagagcaaaata
gcagcgtgtaagtcactgagagctgtggaaagacaaacaagtacgtcgagcgatcacgat
ttctctctgaacacacactga
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