Garra rufa (doctor fish): 141288008
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Entry
141288008 CDS
T11039
Symbol
elp1
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
grf03016
]
141288008 (elp1)
Transfer RNA biogenesis [BR:
grf03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
141288008 (elp1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_EML_2
Beta-prop_NUP159_NUP214
TPR_GEMI5
WD40_CDC20-Fz
Sin3a_C
Motif
Other DBs
NCBI-GeneID:
141288008
NCBI-ProteinID:
XP_073676235
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Position
16:complement(20439894..20465509)
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AA seq
1318 aa
AA seq
DB search
MRNLSLLQRFRCVDLSIPGSPQCFTIRSETGTVLVASELAITEFDPRTEEVYKEVSLTAE
DYLPEDGSGVVVAIQDLPDQESVCVATASGDVILYNLNTSQLECVGSVESGLTGMTWSPD
QELVTLTTGQETIIMMTKDFEPITEIAINQDDFGEDKFITVGWGKKETQFHGSEGKQAAQ
RKAAEVQPALPWDDRKPRITWRGDGQFFAVSAVCSQTGARKVRIWNRECVLQATSEVVNG
LEQPLCWKPSGSLIASTQRHPNKHSVVFLEKNGLLHGDFTLPFGKEQVKVKELLWNSDST
VLAVWMEDLKPGENDHPNTYIQLWTVGNYHWYLKQSLHFGNEPLRAPACVCWDPEKPLRL
HFLTRGWASYTYDWGWSTQRSHGTDCHDNANVAVIDGDKILVTTFRQCVIPPPMCAFELQ
LPVPVNLVTFHSQAQRTNELAALTANGHIYIYGQGGGVENGGVPGVPGFKVILAPLVLRK
TYRIAMDQEEPLTLRLLLWLSDDLFLAVAHGRRLTRLLKLTPSDSQDPKDTLEIRSDVAV
DGCVISLCHSLKNGTVALQLDDGQIRKVHIDSSELSLTEWKDSTGNTISFPRPCVQTALC
TLSGEEHLIGLTERSHLYIGDSLVASNISSFVVYDDFLLLTTHSHMCHCLNLSTLSIKGL
QSALSSEANQNDETVRKVERGSRIVSVVPQDTRLILQMPRGNLETIHHRALVLAQLRKWL
DSLRFKDAFECMRKLRINLNLIYDHNPTVFLDNIEMFLKQIDSISYINLFLTELKEEDTT
TTMYPCPSHSASSSSGKKEGKKVDIICDALRSTMESLDLQKYCLCILTSHVKKTTPELEI
ALQKVHELRVNPPSGSNCVSAEEALKYLLFLVNVNELYEHSLGTYDFDLVLMVAEKSQKD
PKEYLPFLNMLKTLELNYQRYTIDKHLKRYRKALHHLSKCGEEHFAELLNLVKDQRLYSD
ALELYPSDSDQYKTLSVAYAEHLVEQQQAEQAGLLLWRCAENVRALQAFVSCTSWRNALA
VATHIPLPPEQLALLARDLAEKLLEARRHTEAALCLEQYAKDCEEAISALIQGAAWEEAL
RLIYLYNRQDIIETDLKSALLDAHSNHTSFLETQKALFIRHKNRLAVVRELKAKARLELF
DEEGPDCADAELYSEASSVLTGSHLGSKYSRSNSRISSRSSKNRRKAEGKKYSLKEGSPF
EDIALMNALFQIITVVDKMREELHSLLKALVLFQFDGPASNLQRDYGELLQLMETALPEI
WTENLQQGQAPLTGPNSTANSIMASFQKQRPAVPQQNTEALTAPKMKNAVKWKLSILK
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacctcagtctgctgcagcgcttcagatgtgtggatctttctatccccggatcc
ccgcagtgtttcaccatcaggagcgagactggaactgtgctggtggcctctgagcttgcc
atcacagagtttgaccctcggaccgaagaggtttataaagaagtttcactgacggcagag
gactatctcccagaggatggtagtggggttgtggtggcgatacaagatctgccagatcag
gagtcggtatgtgtggccactgccagtggtgatgtcattctctacaacctcaacaccagt
cagttagaatgtgttggcagtgtggaaagcggtctaactggcatgacgtggagcccagat
caagagttggtgactctgaccacaggtcaggagaccattatcatgatgaccaaggacttt
gagccgataactgagattgcgatcaatcaggatgactttggcgaagataagttcatcact
gttggttgggggaagaaggagactcagtttcatggctctgagggcaagcaggccgcccag
cggaaagcagcagaagtgcagcctgccctgccatgggacgacaggaagccaagaatcact
tggcgtggcgatgggcaattctttgctgtcagcgctgtttgttctcagactggtgctcga
aaggttcgaatctggaaccgggaatgtgtcctgcaggccacaagcgaggttgttaacggt
ctggagcagcctctctgctggaaaccctctggcagcctgatcgcttccacacagcgacac
cctaacaaacacagtgtggtgtttttggaaaagaacggactgttgcatggagattttact
ctgcctttcggaaaggaacaggtcaaggtaaaggagctgctctggaacagtgactctact
gttctggctgtttggatggaggacttgaagcctggagagaacgaccatcccaacacatac
attcagctgtggacagttgggaattatcactggtatctaaagcagagtttgcattttggc
aatgagcccctcagggctccggcatgtgtatgttgggatccagagaagcccttgcgtctc
cactttctgactcgaggatgggcgagctacacctacgactggggctggagcacacagcgc
agtcacggcacagattgccatgacaatgccaatgtggcagtgattgatggagataaaata
ctggtgacaacattccgccagtgtgtgatccctccacctatgtgtgcttttgaacttcaa
cttcctgttcctgtcaacttggtcacctttcattctcaagcccagaggaccaatgagctc
gctgctctcacagccaatggacatatttatatatatggtcaaggtggtggagttgaaaat
ggaggtgtacctggagtgcctggctttaaagtcatcttagccccattagtcttaagaaag
acttacaggatcgccatggatcaggaggaacctctgacgctgcgcttgctgctgtggttg
agcgacgatttgtttttggctgtggcccacggaagacgcttgacccgtctgctgaaactc
accccatcagacagccaggaccccaaggacacgctggagatcaggtcagacgttgcagtg
gatggttgtgtgatcagcttgtgtcacagcctcaaaaatggcactgtggccctgcaactt
gatgacggacaaatccgtaaagttcacatagactcttcagagctcagtctaacagaatgg
aaggattctactgggaataccatcagcttccccaggccttgtgttcagacagcactatgt
accctcagcggagaggaacatttaataggcctcacagagagatcacacctctacatcggc
gactcactggtggcctccaatatctcctcgtttgtagtttatgacgacttcctgctgctc
accacacactctcacatgtgccactgtctcaacctcagcacgctctctattaaaggtctg
cagtcagctctgagctcagaagctaatcagaatgatgagactgtacgaaaggtggaacga
ggctctcgtatcgtttctgtggttccccaggacaccagactcatcctgcagatgccaaga
ggaaatctggaaaccatccatcatcgagctcttgtgcttgctcagctcagaaagtggctt
gatagtctcagatttaaggatgccttcgagtgcatgaggaagctcaggatcaacctcaac
ctcatttatgaccacaatccaactgtttttcttgacaacattgagatgttcctgaaacag
atcgactccatcagctacatcaacctgttcctcactgaactcaaagaggaagacaccact
acaacaatgtacccttgtccttcacactcagcctccagttcctcaggtaaaaaggaagga
aagaaggtggatatcatctgtgatgctttacggtcaacaatggagagtctcgacctgcag
aagtattgtttatgtattttgacatcacacgtgaaaaaaactacaccagaactggaaatc
gctctacagaaggtccacgagttacgagtgaacccacccagcggcagcaactgtgtgagc
gcagaggaagccctgaagtatcttctattccttgtcaacgtgaatgagctgtatgaacac
tccctcggcacctacgattttgacctagtgctcatggtggcagaaaaatcacagaaggac
cctaaagagtacctgccatttctgaacatgctgaaaaccttggagctgaactaccagcgc
tacaccatcgacaaacacctcaagagatataggaaggccttacatcacctcagcaagtgt
ggtgaagaacacttcgcagagttgttaaacttggtgaaggatcagagactgtacagtgat
gctcttgagctctatccttcagacagtgaccaatacaagacactgagcgtggcctatgcg
gagcatctagttgagcagcagcaggcggagcaggcaggactgttactgtggcgatgtgca
gaaaacgtccgtgccctgcaggccttcgtcagctgtacaagctggagaaacgccctcgct
gtggcaacacacatcccattaccaccagaacagctggcactgctcgcccgagacctggca
gagaaacttctggaggccagaaggcacacagaagctgccttatgtttggagcagtatgct
aaggattgtgaggaggccatctctgctctgatacagggagctgcatgggaagaagcactc
agattgatttatttgtacaacagacaggacatcattgaaactgatctgaagtctgctctt
ctagatgctcacagtaatcatacgtctttcctggagacccagaaggctttgttcatccgt
cacaagaaccgccttgctgtggtccgagaactcaaagccaaggccagactggagttattt
gatgaggaaggccctgactgtgcggatgctgagctctactcagaggccagcagcgtcttg
accggcagccatcttggctcaaaatactcccgcagcaactctcgcatttcatcgaggtcg
tctaagaaccgtaggaaagcagaaggaaagaaatacagtctgaaggagggaagcccattc
gaggacatcgccctcatgaacgcactttttcaaatcatcaccgttgttgataagatgaga
gaggaacttcacagtctgctcaaggctctggtgctcttccagtttgacggtccggccagc
aacctgcagagagactacggtgaactgcttcagctcatggagacggcccttccggagatc
tggactgagaacctgcagcagggccaagctccactcacaggtccaaactcaacagccaat
agcattatggcatcatttcagaagcaaagacctgctgtgcctcagcaaaacacagaagcc
ctgactgctccaaagatgaagaacgctgtcaagtggaaactcagcattctcaaatag
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