Garra rufa (doctor fish): 141288022
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Entry
141288022 CDS
T11039
Name
(RefSeq) macrophage colony-stimulating factor 1 receptor
KO
K05090
macrophage colony-stimulating factor 1 receptor [EC:
2.7.10.1
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf04010
MAPK signaling pathway
grf04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
141288022
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
141288022
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
grf01001
]
141288022
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
grf04090
]
141288022
Enzymes [BR:
grf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
141288022
Protein kinases [BR:
grf01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
141288022
CD molecules [BR:
grf04090
]
Proteins
141288022
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
Ig_2
I-set
VEGFR1-3_N_Ig-like
Ig_PDGFR_d4
ig
Ig_VEGFR-1-like_5th
VEGFR-1-like_Ig-like
C2-set_2
Ig_4
Anoctamin_N
Motif
Other DBs
NCBI-GeneID:
141288022
NCBI-ProteinID:
XP_073676246
LinkDB
All DBs
Position
16:10683505..10723661
Genome browser
AA seq
972 aa
AA seq
DB search
MFALLLVCGVLLAQAQGWSEPRIKLSSGSPVGTDVILNSGSPLHLICEGDGPVTWVPRLA
KHKRFISKEVGNIRSFRVEKATVDYTGTYKCVYINGNDSNESSSVHVFVRDPRVLFVSPS
MSLRYVRKEGEDLLLPCLLTDPDATDFSFRMDNGSAVPYGMNMTFDPRKGVLIRNVHPGF
NADYICSARIRGVEKVSKTFSINVMQRLRFPPYVFLKRSEYVKLVGERFQISCTTNNPNF
YYNVTWTHSSRELPKAEEKSTMEGDRLAIESILIIPTVQLSDSGNITCTGQNEAGANSST
TQLLVVDEPYIRLSPKLSSKLTYRGLSIEVREGDDVDLRVLIEAYPPLISHQWETPTSHN
TSLPDNRFYKHNDRYEALLFLKRLNFQETGRYTLHVKSSMRNASVTFDIKMYTKPVAEVK
WENITTLSCRSYGYPAPSILWYQCMGIRTTCPENSTGVETQTLAFDKDPYGSVGVESVLT
VGPSNQKMTVVCVAFNLVGQGSDTFAMDVTDQLFTSAMWGSTVAMVVLALLLIFMIYKYK
QKPRYEIRWKIIEATNGNNYTFIDPTQLPYNEKWEFPRDKLKLGKTLGAGAFGKVVEAKA
YGLGKDDNVTRVAVKMLKASAHPDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLV
ITEYCCHGDLLNFLRSKAENFLNFVMMIPDPVMDYKNVNTERMFFRSDSGISSTCSDHYL
DMRPASSRPTNSALNSSPDCEEAEDSWPLDMDDLLRFSYQVAQGLDFLAAKNCIHRDVAA
RNVLLTNSRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFECVYTVQSDVWSY
GIMLWEIFSLGKSPYPNMLVDSKFYKMIKCGYQMSRPDFAPPEMYTIMQMCWNLEAAERP
TFSKISQLIERLLGDTVDQQETQYQNVQSDALSDQQLESCDPVKHEEESFETSCDQEEED
QPLMKPNNYQFC
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcgctcctgctcgtctgcggggtcctgctcgctcaagctcagggttggtccgag
ccgcggatcaaactgagctctggatctccagttggcactgatgtgattctcaactctggt
tctcctcttcatctgatctgtgaaggtgacgggccagtcacatgggtacctcgactggcc
aaacacaagcgcttcatctccaaggaagtcggaaacatccggagtttccgtgtggaaaaa
gccaccgttgattatacaggaacctacaagtgtgtctatattaacggaaatgattcaaat
gagtcatcttcagttcatgtctttgtcagggatcccagagttctcttcgtctcaccaagt
atgtctctgcggtatgtgcggaaagaaggtgaggatctgttgctcccgtgtcttcttacc
gaccctgacgccacagacttctccttccgcatggataacggctcagcggtgccttacggc
atgaacatgacctttgatcccagaaaaggcgtcctgattcgcaacgttcaccctggattt
aatgctgactacatttgcagcgctagaatcagaggggttgagaaagtgtcgaagacattc
tcgataaacgtcatgcaacggttacgttttccaccgtatgtgtttttgaagagaagcgag
tatgtcaaactggtgggagagagatttcaaatcagctgcaccacaaacaaccccaacttt
tactacaacgtcacatggacacactcctctagagagctgcccaaagcagaagagaaatcg
acaatggaaggggatcggttggccatcgagagcatcctgatcataccgactgtccagttg
tctgattcggggaacatcacctgtacgggtcagaacgaggccggagcaaacagctccacc
acacagctgctggtcgtagacgagccgtacattcgactctccccgaagctctcatctaaa
ctcacttaccgcggtctatccatcgaggtgagagaaggtgatgacgtggatctcagggtt
ttgattgaggcgtatccaccgctcatctcacaccagtgggagactccaacatcccacaat
acctcactcccggataacaggttttacaaacacaatgacaggtacgaggccctgctgttt
ctcaagagactgaacttccaggaaaccggccgctacacgctccatgtcaagagcagcatg
agaaatgcctctgttacttttgatattaaaatgtacacgaaacctgtagcggaggtaaaa
tgggagaacatcacgaccctgtcatgcaggtcatatggatatccggctcccagcatcctc
tggtaccagtgcatggggatcagaaccacctgtccagaaaactccacgggtgtcgagacg
cagacgctggcattcgataaggacccatacgggtcggtgggtgtggagagtgtcctgacc
gtgggaccgtccaaccagaagatgacagtggtgtgtgtggccttcaatctggtcggacaa
ggcagcgacaccttcgccatggatgtcactgatcagctcttcaccagcgctatgtgggga
tctacagtggcgatggtggttctagcactgctgctcatctttatgatctacaagtacaaa
cagaaacccaggtatgagatccgctggaaaatcattgaagccacgaatggaaacaactac
accttcatagacccgactcaactgccatacaatgagaaatgggagtttcctcgagacaaa
ctaaagcttggaaagactctgggagctggagcctttgggaaggtggtggaggccaaagcg
tacggcctgggcaaagacgacaatgtcacacgtgtagcagtcaaaatgctgaaagccagc
gctcatccagacgagcgagaagctctgatgtccgagctgaagatcctcagtcatctcggg
cagcacaagaacatcgtcaacctgctgggcgcctgtacacacggtggtcccgtgttggtg
atcacggaatactgttgtcatggtgatcttctgaacttcctgcgtagcaaagccgagaac
ttcctgaacttcgtcatgatgattccagatccggtgatggattataagaacgtcaacact
gaacgaatgtttttcagaagtgatagtgggatttccagcacctgctctgatcattatctg
gacatgagaccggcctcatccagacccacaaactcagctctgaattcttctccggactgt
gaagaggctgaggattcgtggccattggacatggacgacttactcagattctcctatcag
gtggcacagggactcgacttcctcgctgctaaaaattgcatccacagagatgtggcagcc
agaaacgtcctcctcaccaacagccgagtggccaagatctgtgatttcggtctggcacga
gacatcatgaacgactccaactatgtagtcaaaggaaatgcacgtcttccagtgaagtgg
atggctccagagagtattttcgaatgtgtttacacagttcagagtgatgtctggtcttac
gggatcatgctatgggagattttctcattgggtaagagcccatatccaaacatgctggtg
gactccaaattttataaaatgatcaaatgtggctatcagatgtccagacctgactttgca
cctccagagatgtacaccatcatgcagatgtgctggaacctggaagcggcggagagaccc
acgttcagtaagatcagtcagctgatcgagaggctgctgggagacacagttgatcagcag
gagacacagtaccaaaatgtccagtccgacgcactcagtgaccaacaactcgagtcatgt
gaccctgtgaagcatgaagaggagtcatttgagacgtcatgtgaccaggaagaagaggat
cagccgctcatgaaacccaacaactaccagttctgctga
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