Garra rufa (doctor fish): 141288194
Help
Entry
141288194 CDS
T11039
Symbol
canx
Name
(RefSeq) calnexin isoform X1
KO
K08054
calnexin
Organism
grf Garra rufa (doctor fish)
Pathway
grf04141
Protein processing in endoplasmic reticulum
grf04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
141288194 (canx)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
141288194 (canx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
grf03110
]
141288194 (canx)
04131 Membrane trafficking [BR:
grf04131
]
141288194 (canx)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
grf04091
]
141288194 (canx)
Chaperones and folding catalysts [BR:
grf03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
141288194 (canx)
Membrane trafficking [BR:
grf04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
141288194 (canx)
Autophagy
ER-phagy
Other ER-phagy associated proteins
141288194 (canx)
Lectins [BR:
grf04091
]
L-type lectins
141288194 (canx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
FAM176
PFF1_TM
TMEM51
SpoIIIAH
Connexin
DUF6080
UPF0542
SieB
Piezo_TM1-24
V_ATPase_I
MAP17
Zip
Serinc
Motif
Other DBs
NCBI-GeneID:
141288194
NCBI-ProteinID:
XP_073676397
LinkDB
All DBs
Position
16:4999839..5043705
Genome browser
AA seq
598 aa
AA seq
DB search
MELKMRLCVALLSLSLCLVLMGHVRAQEEADDMEMDVEDAIDDMQEEDVEEEEQKAPSSP
AAPTVTYKAPEPMGEHYFAESFDKGTLQGWVLSQAKKEGIDEEIAKYDGKWEVEEMKDTK
LPGDKGLVLKSKAKHHAISGLLLRPFTFDTKPLIVQYEVNFQNGIDCGGAYVKLLSQTPD
LDLEQFVDKTGYTIMFGPDKCGEDYKLHFIFRHKNPKTGEFEEKHAKKPDADLRTYYTDK
KTHLYTLVLNPDNSFEILIDQTVVNSGNLLNDMTPPINPPAEIEDPDDHKPEDWDERPKI
QDPDAVKPEDWDEDAPAKIADEDAVKPDGWLDDEPEYISDPDALKPEDWDEDMDGEWEAP
QIPNPVCETAPGCGPWERPMIDNPNYKGKWKSPMIDNPNYQGVWKPRKIPNPDFFEDLHP
FRMTAFSAVGLELWSMSSDIFFDNFFITSDRNVAERWAADGWGLKKAAEGAAEPGLVNQM
ITAAEERPWLWIVYVLTVALPLVLIIVFCCTGKKSSAPASAAEYKKTDEPQPDVKEEAED
EEDKEEESEAKKSEEEEDSTGEAEEAAGNDNKDDSTSNEKSEDDILRRSPRSRKARKD
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaagatgaggttatgtgtggcgctgctctctctgagtctgtgtctggtcctc
atgggtcatgtgagggcgcaggaggaggcagacgacatggagatggatgtggaagatgcc
atcgatgacatgcaggaggaagatgttgaggaagaggaacaaaaagccccctcttcaccg
gcagcaccaacggtgacatataaagctccagagccgatgggagagcactactttgcagag
tcatttgataaaggaacacttcaaggatgggttttatcccaggccaagaaagaaggcatt
gatgaggaaattgcgaagtatgatggtaaatgggaggttgaggagatgaaggacactaaa
ctcccaggcgataaaggtctggtgctgaaatctaaagctaaacatcacgccatctctggt
cttctactgcgacctttcacctttgacactaaaccactcatcgttcagtatgaggtgaac
ttccagaatggcattgactgtggtggtgcttatgttaaactgctgtctcaaacccctgat
cttgacttggagcagtttgtggataagactggctacaccatcatgtttgggcctgataaa
tgtggtgaggattacaaactccacttcatctttagacacaagaaccccaaaaccggcgag
tttgaggagaagcatgctaagaagcctgacgcagacctccgcacatactacaccgacaag
aagactcacctctacacactggtgttgaaccctgataacagttttgagatcctgatcgac
cagacagtggtgaacagtgggaatctcttgaacgatatgactccccccatcaaccccccg
gctgagatcgaggatcccgatgaccacaaaccagaggactgggacgagagacccaagatc
caggacccagatgctgtcaaacctgaggactgggatgaagatgctcccgctaagattgct
gatgaagatgccgtgaaacccgacggctggttggatgatgagccagagtatatcagtgac
cccgatgccctcaagccagaggattgggatgaggatatggatggcgagtgggaagcacct
cagatcccaaatcccgtctgtgaaacggcccccggctgcggtccatgggaaagaccaatg
atcgacaaccccaactacaagggcaagtggaagtcaccaatgattgacaaccctaattat
cagggagtgtggaagcccaggaagatccccaacccagacttctttgaggacctgcacccg
ttccgtatgactgcattcagcgccgtcggtctggagctctggtccatgtcctctgatatc
ttctttgacaacttcttcatcacctctgatcgtaatgtggccgagcgttgggcggctgat
ggctggggtctgaagaaagcagccgagggagccgctgagcccggtctggtgaatcagatg
ataacagctgctgaagagagaccctggctctggatcgtctacgtcctgactgtggctctg
cctctggtgctcatcattgtcttctgctgcactggaaagaagagctcagcacccgcatct
gctgccgagtacaagaagacagatgaaccacagccagatgtgaaggaggaagctgaggat
gaggaagataaggaagaagagtcagaagcaaagaagagtgaagaagaagaggactcgaca
ggagaagcagaggaagctgcagggaacgacaacaaagatgacagtacatctaatgagaaa
tcagaggacgacattctgagaaggtctcccagaagcaggaaagcgagaaaggactga
DBGET
integrated database retrieval system
