Garra rufa (doctor fish): 141288297
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Entry
141288297 CDS
T11039
Symbol
atg2a
Name
(RefSeq) autophagy-related protein 2 homolog A isoform X1
KO
K17906
autophagy-related protein 2
Organism
grf Garra rufa (doctor fish)
Pathway
grf04136
Autophagy - other
grf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
141288297 (atg2a)
04136 Autophagy - other
141288297 (atg2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141288297 (atg2a)
03029 Mitochondrial biogenesis [BR:
grf03029
]
141288297 (atg2a)
Membrane trafficking [BR:
grf04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
141288297 (atg2a)
Mitochondrial biogenesis [BR:
grf03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
141288297 (atg2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
141288297
NCBI-ProteinID:
XP_073676518
LinkDB
All DBs
Position
16:16520562..16554855
Genome browser
AA seq
2026 aa
AA seq
DB search
MSRWLFPWSGSIKKRACRYLLQHYLGHFLEERLSLDQLSLDLYNGSGVIREINLDVWAVN
ELLDSLGAPLEIVEGFVNSIAVTIPWAALVTEHCTLEVTGLQITCRPKYRTNGNWDSQGW
SSCMTSSMQLAQECLKDPPEASEEPPAPLEGLEMFAQTIETVLRRIKVTFLDTIVRVEHH
SPDAETGVALEMRIKRVDYCDEAVRDSSQTVPVDIHQPPAFLHKILQLNSVQLLYETLGG
SQGLVHSDDMASSRETDKTDEDDGDDVSDAPQSLHPTPKAPEPLLIGQCSGFIETTVKIK
QNEMLPGPKFELDGKVGCLHLLLSPSQITHLTDLLSALCIETSDGGGVGVSGGGVSRPLG
SDDLRLIEEDLSKQLNSEMYDRDLELDAEPFVTTLENGEMFYSMGPGCMTSSVLSTRSGS
ELSDSDMESSIHSQSSLAQTNPLSPQGMLNCPRRYPVPGSLTSLPQCSRPSKRSSRSGQS
EPLKPDSLLRLSLGGVTLTLLEQDPPPGPDGLSSLAKVSQLFFRELAFFKDSMFGERDFH
NLRGSFAKACPHSHIRVTGAAVQLACEMRSAGRHTRATTSDLSFSRLELLECLWDSGRPQ
YTELLQFQSAGLFTMGTTARPCAQFHHSLSEKHMRKSGSRRRVIRRDSSLRVELAELSSE
LDLDIIGRLEDILQAMSHCPAAPQRHTAQAAESHLLELHSSLVLQSPYAVLKVRFPIPDL
RPLGLRRPLSQRAVRSEILSLQISNLELKSQQGPDVQQDGPCSPGAKLTKLLEACFTDMH
GMYEGWEGEAFPCIRVQKSPDPQNPDGIPRIQVRVNEGAGSDITGVCEGVNRDLGLGSMS
LENPCELREKNSSPFSSNRTMFETEEMVIPADPVEMDEFQTQCICQCQYVVDITFPVAYI
LLPSKDAFLSVYNRINNDLLMWEPPPPPPSPPPAPPSSFQSSRSPSRQYRPEEDEFYLCK
SAFRLESDSEEEEPQFYSSKQSKRRKQLEPQSSHALSLFCLTVLIGKGRLQAMTDCKNEA
GHKKELCHGELILDLEGGKIFSVTQHQNNPNLNFLTIESKKVELYHKAEVPDSPMPVKLE
MPRFTCPGHLDPTIYPTEVGVSSVGGRETDIQMLSTAIKITLDLERNVKEFLVALRLHGA
TLRHHMALTNHSWHEQIVDFLDVIDDDILGYSPPAVITVLHTHLATCAVDYRPLYLPLRV
LFTAESFSLSSNIIVDTATFHLRFILDDSALYLSDKCESDTVDLRRDYVCVLDIDLLELA
ITTWKGTDSSKLTQPLFELRCSNNVVHVHTCADSCAALVNMLQYLVSQGDLHPPPRHTCP
TEIAGQKLPLSESPASLPPCPPAETAEINQYDLTDALIDTERILQEETFDSAGSPSIRRA
SPASVYLFPGEAPKLRPSVLEGEESDIDGLVTTAMEAHADMMSEEGSEGSTDNDDFCILE
APGMGIPPRDGEPVVTVLSQGPIKVRDGYYSRPRGSSDLLRAPARFPVPQNRVVLREVSV
VWHLYGGKDFGGKPSSAHTPHSHKVRSSAPGARGSPSRSAGPSRPQNSWRWVGGSGRQHT
LLMEIQLTKVSFQHETYPVVAPSAAGPDAEGPGLGEQPISRQVFIVQELEVRDRLASSQI
NKFLYLYTSESMPRRAHSNMLTVKALQVMPESGLGGPECCLRISLLPLRLNIDQDALFFL
KDFFSNMAAGVNPYLSVDPAAEVRTDVPQKGLDETDPSCGLGHDLAASVETTYSEQSSSS
AGSSSSSDQPIYFREFRFTSEVPIWLDYQGKHVVIEQGTFAGILIGLAQLNCSELKLKRL
CCRHGLLGVDKVIQYAVNEWLTDIRKNQLPGILGGVGPMHSVVQLFHGVRDLFWMPIEQY
RKDGRIIRGLQRGAASFGTSTASAALELSNRLVQAIQATAETVYDILSPTPPLTRYITEG
RPAPRPRRTPQPADLREGVAKAYDTVREGVIDTAQTLCDVASRGHEQKGLPGAVGGVLRQ
IPPTVVRPLIVASEATSNLLGGMRNQIKPDARKEDFLKWRTEEGQE
NT seq
6081 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggtggctcttcccctggtcgggctcaataaagaaacgggcctgtcggtacctc
ctgcaacactacctgggccacttcttggaggaaagactcagtttggaccagctgagcttg
gacctgtacaatggcagcggggtcatcagagaaattaatttggatgtgtgggcggtgaac
gagttgttggactcattgggagctcctctggagattgttgaaggttttgtgaacagcatc
gctgtgactattccctgggcggcacttgtaacagaacactgcacccttgaagtcactgga
ttgcaaataacatgcaggcccaaatacagaaccaatggaaactgggattcccaagggtgg
tcgtcatgcatgacgtccagcatgcagctggcccaggagtgcctgaaggacccacccgag
gcgtcagaagagccgccggctccactagaggggctggaaatgtttgcacagaccatcgag
acagtcctacgtcgaataaaagtcacctttctggacaccatagtgcgtgtagaacaccat
tccccagacgctgagactggggttgccttagagatgcgcattaaacgtgtggactattgt
gatgaggctgtgagagactcaagccagacagtgcctgtagacatccaccagccaccagcc
ttcctgcacaagatccttcagctcaactccgtacagctgctctatgagactctcggagga
tcacaggggctggttcattctgatgacatggcgagcagcagggaaacagataagacagat
gaagatgatggagatgatgtctcagatgcccctcaatcattacatcccactccgaaggcc
cccgagcctctgctgattggacaatgctctggattcatagagacaacagtcaaaatcaaa
cagaacgaaatgctgcctgggcccaagtttgaattggatggtaaagtagggtgtctccac
ctgctgctgtccccgagtcagatcacacacctgacagacctcctatccgccctctgcatc
gagacatcagacggtggtggtgttggtgtgtctggtgggggtgtttctaggcctctgggt
tcggatgatctacgattgatcgaagaggatctcagtaagcagctgaactcagaaatgtat
gatagagacctggagctggacgcagagccctttgttaccactttggagaacggagagatg
ttttattcaatgggtcctggctgtatgaccagcagtgtgttgtcaacacgctctggaagt
gaattatctgacagtgatatggagtcgtccattcatagccagagcagcctggctcaaaca
aaccctctgtctccacagggaatgctcaactgtcctcgtcgttatcctgtaccaggatcc
ttaactagtttgcctcaatgtagcagaccttccaaacggtcgtcccgaagcggtcaatca
gagccactgaaacctgactcattgctccgcctctctctaggcggagtcacacttactctg
ttagagcaggacccacctcccggtccagatgggctctcctcattggctaaggtgtcacag
ttgtttttccgtgagcttgcattctttaaggacagcatgttcggtgagagagacttccac
aatttgagaggaagctttgctaaagcatgtccccactcccacatcagggtgaccggtgca
gcagtgcagctggcatgtgagatgcgtagcgcagggcggcacacccgagccacgacctct
gacctctccttcagcaggctggaactgctggagtgcctgtgggactcgggcagaccacag
tacacagagcttttgcagttccagtcagccggtctcttcacgatgggcaccactgccaga
ccctgtgcccagttccaccacagtctgtctgagaagcacatgcgaaagagtggaagcaga
cgtcgtgtgatacgcagggacagctctctgcgggtcgagcttgcggagctcagctctgag
ttggacctggacattataggccgactggaggacatcctgcaggccatgagtcactgtcca
gcagcacctcaaagacacacagcacaggctgcagagtctcatttgttggagctccattcc
tctcttgtgcttcaatctccttatgccgtgttgaaggtccgtttccccatccctgacctt
cgacccctagggctgaggcggcccttgagccagcgtgcagtgcgcagtgagatcttaagc
ctgcagatctctaatctagagctgaagtctcagcaggggccagacgttcagcaggacggc
ccctgcagcccaggggccaaactcactaaactactggaggcctgtttcactgatatgcat
ggaatgtatgagggctgggagggagaggcatttccctgtatccgtgtgcaaaagagccca
gatccacagaaccctgatggcattcccagaattcaggtgcgagtgaatgaaggagcaggt
tctgacattactggtgtgtgtgaaggggtgaacagggatttggggctgggctccatgtct
ctagagaacccctgtgaactcagagagaagaacagctctcctttctcctccaaccgcact
atgtttgagactgaagagatggtgatcccagcagacccagtggagatggatgagtttcag
actcagtgtatatgtcagtgtcagtatgtggttgatatcacgtttccggtagcctacatt
ctcctgcccagtaaagacgcttttctgagcgtctataacaggattaataatgatctgttg
atgtgggagcctcctccacctcctccatcgcctcctcctgctcctccttcttcttttcaa
agttctcgtagtccgtcccgccagtacagacctgaagaggatgaattttacctctgtaaa
tctgccttcaggctggaatctgactctgaggaggaggagcctcagttctactcatccaaa
caatcaaaacgaagaaaacagttagagcctcagtctagccatgccctcagtctgttctgt
ttaacagtgctgattggcaaaggtcgcctccaagccatgacggactgcaagaacgaagct
ggacataaaaaggagctctgtcatggagaactcattttggacttggaaggaggaaagatt
tttagtgtgacgcaacaccagaacaatcctaatctcaatttcctgaccatagaaagcaaa
aaagtagagctgtaccataaagctgaggtcccagactcccctatgcctgtgaaattggaa
atgcccaggttcacttgcccaggtcatctggaccctaccatttaccccacagaggtgggg
gtgagcagtgttggtggccgagaaactgacattcagatgctgtcgactgctatcaagatc
acattagatctggagaggaatgtgaaggagtttctggttgcactgcgactccatggtgct
actttacgacatcacatggcgttgaccaatcatagctggcatgagcagattgttgatttc
cttgatgtcattgatgacgacattttaggctactccccacctgccgtcatcacagttctt
cacactcacctggccacctgtgcagtggactacaggccgctttatcttcctctgcgagtt
ttgtttacagccgagtccttttctttatccagcaacatcattgtggacactgcgaccttt
cacctcaggtttatcttagatgactctgcattgtacctgtctgataaatgtgaaagtgat
actgtggatttgaggcgagactatgtgtgtgtgttagacattgatctgctggaactggcc
ataacaacttggaaaggaactgactcaagtaaactgactcagccgttgtttgagcttcgt
tgttctaataatgtggttcacgtgcacacttgtgccgactcgtgcgctgctctggttaac
atgctgcagtacctggtttcccagggcgatcttcatcctccccctcgccacacatgcccc
acagagatcgccggacagaaacttccgctgtccgaaagtcccgcctcccttccaccctgc
ccaccagcagagacagcagagataaaccaatatgacctcacagatgccttgattgacact
gagagaatcttacaggaagagacctttgattctgcaggttctccctccattcgccgagcc
tcacctgcctcagtgtatctgttcccgggagaagcccccaagctccgcccctctgttcta
gaaggggaggagtctgatattgatggactggtcactacagctatggaagctcatgcagat
atgatgtcagaggaaggatcagagggttccaccgacaacgacgacttctgcatcctagag
gctcctgggatgggcatcccacctagagatggtgagcctgtggtgacggtgctctcccag
ggtcctataaaggtgcgggatggatactactctcggccacggggcagttcagatctgctg
cgtgccccggcccgcttcccagtgcctcagaacagagtggtgctccgagaagtgtctgtc
gtctggcacctgtatggcggcaaagacttcggtggcaaacccagctcggcccacacacca
cacagccataaggttcgttcatctgctcccggagcccgtggttctccctctcgttctgcg
gggccctcacggccccagaactcctggcgttgggttggaggaagcgggcggcagcacaca
ctgctcatggagatacaactgacaaaggtcagtttccagcatgagacgtatccagtggtg
gcaccctctgctgcaggacccgatgcagaaggcccgggtctcggagaacagcctatttcc
cgccaagtgtttatcgtccaggaactggaggtgcgagaccgtctggcttcctctcaaatc
aacaagttcctgtatttgtacaccagtgagagcatgccacgcagagcccactccaacatg
ttgacggtgaaagcgctgcaggtgatgcccgaatcgggtctgggcggacctgagtgctgt
ctgagaatcagtctgttaccactgcgactcaatatcgaccaggatgcacttttcttctta
aaggactttttcagtaacatggctgcaggagttaatccttacctatccgtcgaccctgca
gctgaagtgaggactgacgttcctcagaagggtttagacgaaacagaccctagctgtgga
ctgggtcatgatctcgctgcttctgtagaaacgacctacagtgagcagagttcctcctcc
gctggctcctcgtcctcctctgaccagcccatctacttcagagagtttcgtttcacctct
gaagttcccatctggctggactatcaagggaagcatgtggtcattgagcagggaacgttt
gcaggcatcctgattggtttggcccagctgaactgttctgaactaaagctaaagcgattg
tgctgtagacatgggctgttgggtgttgataaggtgattcagtatgctgtgaatgaatgg
cttacggacatcaggaagaaccagctgccgggaattctgggaggtgttggtcccatgcat
tctgttgtacagctcttccatggtgtgcgtgatttgttctggatgccgatagagcagtac
cggaaggatgggcgtattattcgtggcctccagaggggggcggcatcgttcggcacctct
acagcctctgctgccctggagctcagcaacagactagtgcaggctattcaggccactgcg
gagacggtgtatgacatcttatctccgactccacctctaacacgttacatcactgaggga
cgtcccgctccccgtcccagacgcacccctcaaccagctgacctcagagagggtgtagcc
aaggcctacgacaccgtcagagagggagtgattgacaccgctcaaaccctatgtgatgtc
gcgtctcgtggtcacgagcagaaaggtcttcctggagcggtgggcggggttttgcgccag
atcccgcccaccgtggtccgtccactcatagttgcctcagaggccacttcgaacctcctg
ggaggaatgcggaaccaaatcaaaccagatgcgcggaaagaggacttcttaaaatggcgc
accgaagaaggccaagaatga
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integrated database retrieval system
