KEGG   Garra rufa (doctor fish): 141288311
Entry
141288311         CDS       T11039                                 
Symbol
rack1
Name
(RefSeq) small ribosomal subunit protein RACK1
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
grf  Garra rufa (doctor fish)
Pathway
grf03010  Ribosome
Brite
KEGG Orthology (KO) [BR:grf00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    141288311 (rack1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:grf03019]
    141288311 (rack1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:grf04147]
    141288311 (rack1)
Messenger RNA biogenesis [BR:grf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     141288311 (rack1)
Exosome [BR:grf04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   141288311 (rack1)
  Exosomal proteins of colorectal cancer cells
   141288311 (rack1)
  Exosomal proteins of bladder cancer cells
   141288311 (rack1)
SSDB
Motif
Pfam: WD40 Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_Gbeta WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_EML_2 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_SPT8 Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_EML WD40_MABP1-WDR62_1st DSE1_N Beta-prop_EIPR1 Beta-prop_RIG_2nd TRM82_WD Beta-prop_SCAP WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_VPS8 Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_DCAF12 ASA1 Beta-prop_WDR41 CFAP251_N Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_NOL10_N Beta-prop_DCAF4 Beta-prop_IFT140_1st eIF2A Beta-prop_NWD2_C Beta-prop_ACSF4 Beta-prop_Vps41 Beta-prop_WDR75_2nd Cytochrom_D1 Tricorn_2nd Beta-prop_NUP159_NUP214 Beta-prop_pof12 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 141288311
NCBI-ProteinID: XP_073676534
LinkDB
Position
16:complement(44820482..44825289)
AA seq 317 aa
MTEQMTVRGTLKGHSGWVTQIATTPQFPDMILSASRDRSIIMWKLTRDETNYGIPQRALK
GHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQI
VSGSRDKTIKLWNTLGVCKYTIQDDSHSEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLA
NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDSGDNINALC
FSPNRYWLCAATGPSIKIWDLEGKIIVDELRQDIITTNSKAEPPQCTSLAWSADGQTLFA
GYTDNLIRVWQVTIGTR
NT seq 954 nt   +upstreamnt  +downstreamnt
atgaccgagcagatgacagtaagggggaccctaaagggtcatagtggatgggtcacccaa
attgccacaacaccccaatttcccgacatgattctgtccgcgtcccgggacaggtccatc
attatgtggaagctgacccgtgatgagaccaactatggcatccctcagcgtgctctgaag
ggccattcccactttgtgagtgatgttgtcatctcatctgatggtcagttcgccctgtct
ggctcttgggacggcaccctgcgcctgtgggatctgacaactggcacaacaacccgtcgt
tttgttggacacaccaaggatgttctgagcgtggctttctctgctgacaaccgtcagatc
gtgtctggatccagagacaagaccatcaagctgtggaacaccctgggtgtctgcaagtac
accatccaggatgacagccacagtgagtgggtgtcgtgcgtgcgtttctctcccaacagc
agcaaccccatcattgtgtcctgcgggtgggacaaaatggtcaaggtatggaatcttgct
aactgcaagctaaagaccaaccacattggccacactggatacctgaacacagtgactgtg
tctcctgatggatctctgtgtgcctctggtggaaaggatgggcaagcaatgctgtgggac
ctgaacgagggaaagcacctttacaccctggacagtggtgacaacatcaacgccctttgc
ttcagccccaaccgctactggctgtgtgccgccactggacctagcatcaagatctgggat
ctggagggcaaaattattgttgatgaactgaggcaggacatcattaccaccaatagcaag
gctgagccacctcagtgcacttctctggcctggtctgctgatggacagactctctttgct
ggctacactgacaacctgataagagtgtggcaggttaccattggaaccagatag

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