Garra rufa (doctor fish): 141288328
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Entry
141288328 CDS
T11039
Symbol
ctnna1
Name
(RefSeq) catenin alpha-1
KO
K05691
catenin alpha
Organism
grf Garra rufa (doctor fish)
Pathway
grf04520
Adherens junction
grf05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
141288328 (ctnna1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
141288328 (ctnna1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
grf04812
]
141288328 (ctnna1)
Cytoskeleton proteins [BR:
grf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
141288328 (ctnna1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
GIT1_C
Talin_IBS2B
Motif
Other DBs
NCBI-GeneID:
141288328
NCBI-ProteinID:
XP_073676554
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Position
16:complement(20864041..20985116)
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AA seq
907 aa
AA seq
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MTSINTANINFKWDPKSLEIRTLAVERLLEPLVTQVTTLVNSSNKGPSNKKKGRSKKAHV
LAASVETATQNFLEKGEKIAKESQFLKEELTAAVEDVRKQGESMKLASGEFAEDPCSSVK
RGNMVRAARALLSAVTHLLVLADMADVYQLLLQLKLVEESLVKVRNAGTEQDLGIQYKAL
KPEVDKLNMMAAKRQQELKDVHHKDQMAAARGVLQRNVPMLYTASRACLQHPDVAAYKAN
RDLIYKQLQHAVSGISNAAQATSSEDSNFSQSAGGGELAYALNNFDKQIIVDPLSFSEER
FRPSLEERLESIISGAALMADSSCTRDDRRERIVAECNSVRQALQDLLSEYMGNAGRKEK
SDALNTAIDRMTKKTRDLRRQLRKAVMDHVSDSFLETNVPLLVLIEAAKNGNEKEVKEYA
QVFREHANKLIEVANLACSISNNEEGVKLVRMAASQLETLCPQVINAALALAAKPNSKVA
QDNMDLFKDQWEKQVRVLTDAVDDITSIDDFLSVSENHILEDVNKCVIALQEKDVDGLDR
TAGAIRGRAARVVHVVTSEMDNYEPGVYTEKVLEATKLLTDTVMPRFTEQVEAAVEALSA
NPSLPVDENEFIDASRLVYDGVRDIRKAVLMIRTPEELDDSDFETEDFDSRSRTSVQTED
DQLIAGQSARAIMAQLPQEQKAKIAEQVASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMC
MIMMEMTDFTRGKGPLKNTSDVISAAKKIAEAGSRMDKLGRAIADQCPDSACKQDLLAYL
QRIALYCHQLNICSKVKAEVQNLGGELVVSGVDSAMSLIQAAKNLMNSVVSTVKASYVAS
TKYQKSQGMQNLNMPAVSWRMKAPEKKPLVKREKQEDSQNNKVKRSSQKKHVNPVQALSE
FKAMDSI
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcattaacacagcaaacatcaacttcaaatgggatcccaagagcttggaaatc
cgcacactggctgtggaaagactgctggagcccttggttacccaggtcaccacacttgtg
aactctagcaacaaaggaccatctaacaagaagaagggccgctccaagaaggctcatgtt
ctggcagcctctgtggagacagccacacagaacttcctggagaaaggcgagaagattgct
aaagagagccaattcttaaaggaggagctgactgcagcagtggaggatgtccgcaagcaa
ggagaatccatgaagttggcctcgggagagtttgcagaggatccctgttcttcagtgaag
agaggcaacatggtccgtgccgcacgtgcccttctttctgctgtcactcatctgcttgta
cttgcggacatggctgatgtgtaccagcttctgcttcagctcaaattggttgaggagagc
ctggtgaaggtgcgtaacgctggcactgagcaggacctgggtattcagtacaaagctctg
aaaccggaagtggacaaactgaacatgatggcggccaaaaggcagcaggaactcaaggac
gtccatcacaaagaccaaatggcggcggctcgcggcgtccttcagaggaacgttccaatg
ctgtacacggcttcacgtgcctgcctgcagcacccagacgtggctgcgtacaaggcaaac
cgggacctcatctacaagcagctgcagcacgctgtctccggcatatctaatgcagcccag
gctaccagcagcgaggactccaacttctcccagtctgcaggtggaggagagctggcctac
gccctcaacaactttgataagcagatcatcgtggacccgctgagtttcagtgaggagagg
ttccggccttctctcgaggagcgtctggagagcatcataagtggcgccgccctcatggcc
gattcctcctgcacgcgtgatgaccggcgcgagcgcatcgtggccgaatgcaactctgtg
cgccaggcgctgcaggatcttctctccgagtacatgggcaatgctggacgtaaggagaag
agcgatgccttgaacacggccatcgacaggatgactaagaagacccgtgacctgcgcaga
cagctgcggaaggctgtgatggaccacgtgtcggactcttttctggagaccaatgttcca
ctgctggtattgatcgaggctgccaagaatggtaatgaaaaggaggtgaaggaatatgcc
caagttttccgtgagcacgccaacaaactgattgaggtagcaaaccttgcctgctccatc
tcaaacaatgaggagggagtaaagttggtgcggatggctgcttcccaactggaaacactt
tgccctcaggtgattaatgcagccttggccctggctgccaagcctaacagcaaagtggcc
caggataacatggatttgtttaaggaccagtgggagaaacaggtgcgagtgcttactgat
gcagtggatgacatcacttccattgacgacttcctcagcgtgtctgaaaatcacattctg
gaggatgtgaacaaatgtgtcatcgctctgcaagagaaagatgtcgacgggctggatcgc
accgctggagccattcgaggacgagctgcccgtgtggtccacgtggtcacatctgagatg
gacaactatgagcctggggtctacacagagaaggttctggaagccaccaagcttctcact
gatacagtgatgccacgtttcactgagcaggtagaggcagccgtggaggctctcagtgcc
aacccaagcctgccagtggatgagaacgagttcattgatgcctctcgtctggtatatgat
ggcgtgagggacatcaggaaggcggtgcttatgatcaggaccccagaggaactggacgac
tctgactttgagacagaagactttgattctcgtagcaggaccagcgtgcagacggaagat
gatcagcttatcgctggacagagtgctcgggccatcatggctcagctaccccaggagcag
aaggcgaagattgccgagcaggtggccagtttccaggaggagaagagcaagctggacgcc
gaggtatccaagtgggatgacagcggaaatgacatcatcgttttggccaagcaaatgtgc
atgatcatgatggaaatgacagacttcaccaggggtaagggaccactcaaaaacacctct
gatgtgattagtgctgcgaagaagattgccgaagctggatcaagaatggacaagctgggc
cgcgcaattgcggatcaatgtccagattcagcgtgcaagcaggatctgttggcctatctg
cagcgtatcgccctgtactgtcaccagctcaatatctgcagtaaagtcaaagcagaggtg
cagaatctgggcggagagcttgttgtgtctggggtggacagcgctatgtctctgatccag
gcggccaagaatctgatgaattcggtggtgtccactgtgaaggcctcctacgtggcctcc
accaagtaccagaagtctcaaggaatgcaaaatctcaacatgcccgccgtctcctggagg
atgaaagctcccgagaaaaagccgctggtcaaacgcgaaaagcaagaggacagtcagaac
aacaaagtaaagcggtcctctcaaaagaagcacgtcaaccccgtgcaggccctgagcgag
ttcaaagcaatggatagtatttaa
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