Garra rufa (doctor fish): 141288402
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Entry
141288402 CDS
T11039
Symbol
rnf145a
Name
(RefSeq) RING finger protein 145
KO
K23789
E3 ubiquitin-protein ligase RNF145 [EC:
2.3.2.27
]
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
grf04121
]
141288402 (rnf145a)
Enzymes [BR:
grf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141288402 (rnf145a)
Ubiquitin system [BR:
grf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
141288402 (rnf145a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRC8_N
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-RING_11
zf-ANAPC11
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
141288402
NCBI-ProteinID:
XP_073676641
LinkDB
All DBs
Position
16:complement(30740120..30770376)
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AA seq
647 aa
AA seq
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MAVKERVEAVLNVGLRVPSIMLLEVLYRWDVSSFFQKIQRSSLNNNPLFQYKYLALYLHY
VGYILSLVLLTLPRQHLVQLYLYVLTALLLFAGHQISRDYVRSELESGYEGPLYLEPLSI
NRFTTALICQLVVCTLCSCVMQTKRIWLFSAHLLPLVARLCLVPLETIVFVNRFAMIFTG
LEVIYFLASNLLVPFNLAKTAYRELAQVVEVYGLLALGMSLWNQLVLPVLFMCFWLVLFA
LQIYTYFSTRDQPTSRERLLFLFLTSIAECCCTPYSLLGLVFTVSFVALGVLTLCKFYLQ
GYRAFMNDNTMHRGMTEGITLLILAVQTGLIELQVIHRAFLLSIILFIVVASILQSMLEI
ADPIVLALGASRDKSLWKHFRAVSLCLFLLVFPAYMSYMICQFFHMDFWLLIIISSSILT
SLQVLGTLLIYVLFMVEELRKAPVENMDDVIYWVNGTYRLLEFLVALCVVAYGVSETVFG
EWTVMGSTIVLIHSYYNVWLRAQLGWQSFLLRRDAVNKIKSLPTASHQQLQQHNDICSIC
YQDMTSAVITPCSHLFHAGCLKKWLYVQETCPLCHNQLKGSSQPGSSTQDNPLQESPAGD
PDPSQHPESDSTLQVPQQDDTNLASSSDLTAELKDNDDTPACSSSQS
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgaaggagcgggtggaggcggtgctgaatgtgggcctgcgggtccccagtata
atgttactggaggtgctgtaccgctgggatgtcagctccttcttccagaagatccagaga
agcagcctcaacaacaaccccctcttccagtacaagtacctggctctctaccttcactat
gtgggctacattctgagtctggttctgctcactctgccccgacagcacctggtgcagctc
tacctgtatgtgctcactgctctgctgctgtttgctggtcaccagatctcaagggactat
gtgcgcagcgagctggagtctggatatgagggcccgctgtacctggagcctctgtccatc
aaccgcttcactactgcactcatctgccagctggtggtgtgcaccttgtgctcctgtgtg
atgcagaccaagcgcatttggctgttctcggcgcacttgctccctctggtggccaggctg
tgcctggtccctttggagaccatcgttttcgtaaatcgctttgccatgattttcacaggc
ctggaagtcatttactttttggcctccaacctgctggtgccatttaatctggccaagaca
gcgtaccgggagcttgcacaggtggtggaggtttatgggttgctggctctcggtatgtct
ctgtggaatcagttggttctgcccgtgctgtttatgtgtttctggctggttctgtttgct
ctccaaatctacacgtactttagcacacgagaccaacccacatctagagagaggctgctc
ttcctttttctcaccagtattgcagagtgctgttgtactccgtactctctgctgggcctg
gtcttcaccgtgtcattcgttgctttgggagtgctcactctttgcaagttctacctgcag
ggctacagggctttcatgaatgacaacaccatgcacaggggcatgacggagggaatcact
cttctgatcctcgctgttcagactggactgatcgagctgcaggtcatccacagggccttc
ctcctgagcatcatcctcttcattgtggtggcctctatcttgcagtctatgctggaaatt
gctgatcccatagtgctggcactgggagcctccagagacaagagtttatggaagcatttt
cgggcagttagcctgtgcttgttcctgctggtgttcccggcctacatgtcctacatgata
tgtcagttcttccacatggacttctggctgctgatcatcatctcctccagcatcttgacc
tcattacaggtgctgggcacgctgctgatctacgtgctcttcatggtggaggagctccgc
aaggcaccggtggagaacatggatgatgtcatctactgggtgaacggcacctacagactg
ctggagttcctggtcgctctgtgcgtggtggcgtacggcgtgtcggagacggtgtttgga
gagtggaccgtgatgggctcgactatcgtactcatccattcttactataacgtgtggctg
agggcccagctgggctggcagagtttcctgctccgcagagatgctgtcaacaagatcaag
agcctgcctacagcttctcaccaacaactccagcagcacaatgacatctgttccatctgc
taccaggacatgacgtcagctgtgatcaccccctgcagtcacctcttccatgcaggctgc
ttgaagaagtggttgtatgttcaagagacctgccctctttgccacaaccagctgaaaggc
tcctcacaacctggctcttcaacacaggacaacccactacaagagtccccagcaggtgat
ccagacccttcacagcatccagagtccgattcaaccctccaggtccctcagcaagacgac
accaatctcgcttcatcgtccgacctcacggctgagctaaaagacaacgacgacactcct
gcctgctcctcctcccaatcctaa
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