Garra rufa (doctor fish): 141288420
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Entry
141288420 CDS
T11039
Symbol
nr3c1
Name
(RefSeq) glucocorticoid receptor
KO
K05771
glucocorticoid receptor
Organism
grf Garra rufa (doctor fish)
Pathway
grf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
141288420 (nr3c1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141288420 (nr3c1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
grf03310
]
141288420 (nr3c1)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
141288420 (nr3c1)
Nuclear receptors [BR:
grf03310
]
3. Estrogen like
3C. 3-Ketosteroid receptor
141288420 (nr3c1)
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Gene cluster
GFIT
Motif
Pfam:
GCR
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
141288420
NCBI-ProteinID:
XP_073676659
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Position
16:39958162..39993204
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AA seq
751 aa
AA seq
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MDQGGLKNGAKRDDHLNTLDYSNSPVEGILRSGIQSAMSVAPTSVVPQANPLMQPVSGDL
PNGLSNSPTLEEHTTSVSSTLGIFGEDSELKMVGKEQRAQQHQTLCAFTLGDSFSSLEAS
IADLNRASPSVDSLIGGVDPNLFPLKTDDFSPMDKGDMDLDQDSFGPIGKDVDVGNHKLF
SDSTLDLLQDFELDGSPSDFYVADDAFLSTIGEDALLGDLPTNTERDAKTAASVSGTVNG
TTTITSPSSISTSTISLPTVKVEKDSIIQLCTPGVIKQENNGGTSYCQASLHSTPINICG
VTTSSGQSFLFGTGPSTAAASQQKDQKPIFNVYSPLTSTDDGWGRAQSFGNASEMQQRAS
ECFSKSFTSPYARSEDSTGTSSAAGKSGTHKSCLVCSDEASGCHYGVLTCGSCKVFFKRA
VEGQHNYLCAGRNDCIIDKIRRKNCPACRFRKCLMAGMNLEARKTKKGRHTGKVIQQPSI
PERSLPPLPEARALVPKPMPQVVPTMLSLLKAIEPDTIYAGYDSTLPDTSTRLMTTLNRL
GGRQVISAVKWAKALPGFRNLHLDDQMTLLQCSWLFLMSFGLGWRSYQQCNGNMLCFAPD
LVINEERMRLPYMTDQCEQMLKISNEFVRLQVSNEEYLCMKVLLLLSTVPKDGLKSQSVF
EELRMSYIKELGKAIVKREENSSKNWQRFYQLTKLLDSMHDMVGGLLNFCFYTFVNKSLS
VEFPEMLAEIISNQLPKFKAGSVKPLLFHQK
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaggcggactgaagaacggcgccaagagagatgatcatttgaacacgctggat
tacagcaacagcccagttgagggaattttacgaagcggaatacaaagcgccatgtctgtc
gcccccacctcggtggttcctcaagccaatccgctgatgcagccagtttccggggacctt
cccaacggcctgagcaactcacccactctggaggagcacactacctctgtgtcctccacc
cttggcatctttggggaggattcagagctcaaaatggttgggaaggagcagagggcccag
caacaccagaccctgtgcgctttcactttgggagacagcttctcaagtctggaagccagc
atcgcagaccttaacagagcctccccgtcagtggactccctgatcggtggagttgacccc
aatctctttcctttaaagacagatgacttttctcccatggataagggcgatatggacctt
gaccaagattcctttgggcccattgggaaagatgttgatgttggcaatcataagctcttt
agtgacagcactttggacctcctgcaggacttcgagttggacggatcgccttccgatttc
tacgtggcggacgacgcgttcctctccaccattggtgaagatgctctgctcggagacttg
ccgacaaatacggagagggacgcaaagactgccgcctctgtgagcggcacggtcaatggc
acaaccaccattaccagcccctccagcatcagcacgtccaccatcagcttgcccactgtg
aaggtggagaaggactctataatccagctgtgtactccgggggtcatcaaacaggagaac
aacggtgggactagctactgtcaggcgagcctccacagcacacccattaacatttgcggt
gtcaccacttcaagtggacagagcttcctatttgggaccggcccatccacagctgctgcc
agtcagcagaaagatcagaagcccatctttaacgtctactcccctttgacctctacagat
gacggctggggcagggcccagagctttgggaatgcaagtgaaatgcaacagagggccagc
gaatgcttttccaaaagcttcacaagcccctatgcaagatctgaagacagcactggcaca
tcctcagctgctgggaagtccggcacacacaagagctgtctcgtttgctccgatgaagct
tcaggctgccattatggagtcctcacctgcggaagctgtaaagtcttctttaagagagca
gttgaagggcaacacaattacctgtgcgctggacggaacgattgcatcattgacaaaatc
cgccggaagaactgccctgcctgtcgtttccgcaaatgcctcatggcaggcatgaaccta
gaggcccgtaaaaccaagaagggccgtcataccggaaaggtaatccagcagccatcgatt
ccagagcgcagtcttcctccgctgcctgaggcccgggcgctggtgcccaaacccatgcct
caggtggtgcccaccatgctgtcgctgctaaaggccatcgagccggacaccatctacgcc
ggatacgacagtaccctacctgacacctccacccgcctcatgaccactctcaacaggctg
ggtggccggcaggtcatctctgcggtcaaatgggccaaagctctgccagggttcaggaac
cttcacctggatgatcagatgactcttctgcagtgttcctggctgttcctcatgtccttt
ggactcggctggaggtcataccagcagtgtaatggaaacatgctgtgttttgctccagac
ctggtcatcaatgaagagaggatgaggctgccctacatgactgatcagtgcgagcagatg
ctgaagatctccaatgagtttgtgagactgcaagtgtctaacgaggagtacctgtgcatg
aaagtccttctgcttctgagcacagtgccgaaggatggtttgaaaagccagtcagtgttc
gaagagctacgaatgtcttacattaaagagctcggcaaggccattgtgaagagagaggag
aactccagcaagaactggcaacgattctatcagctcactaagctactggactccatgcat
gacatggtgggtggactcctgaacttctgtttctacacctttgtgaacaaatccctcagc
gtggagttccccgaaatgctcgctgagatcatcagcaaccagttaccaaaattcaaagct
gggagcgtcaaaccgctgctctttcaccagaagtga
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