Garra rufa (doctor fish): 141288436
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Entry
141288436 CDS
T11039
Symbol
sox3
Name
(RefSeq) transcription factor Sox-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141288436 (sox3)
Transcription factors [BR:
grf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
141288436 (sox3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
141288436
NCBI-ProteinID:
XP_073676675
LinkDB
All DBs
Position
16:32454055..32457033
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AA seq
300 aa
AA seq
DB search
MYNMMETEIKSPLPQSNTGSAAGGKNNSANDQDRVKRPMNAFMVWSRGQRRKMAQENPKM
HNSEISKRLGADWKLLTDAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYS
LPGGLLAPGANAVNNAVSVGQRMDYTHMNGWTNSAYSLMQDQLAYPQHPSMNSPQIQQMH
RYDMAGLQYPMMSTAQTYMNAASTYSSMSPAYTQQTSSAMGLGSMASVCKTEPSSPPPAI
TSHSQRACLGDLRDMISMYLPPGGESADHSSLQTSRLHSVHPHYQSAGTGVNGTLPLTHI
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggaaaccgagattaaaagcccccttccgcagtccaacacgggctcg
gcggcgggcggcaaaaacaacagtgccaacgaccaggaccgggtgaagcggcctatgaat
gcttttatggtgtggtcccgcgggcagcggaggaagatggcacaggagaatcctaaaatg
cacaactccgagatcagcaagcgcctcggcgctgactggaaacttttgactgacgccgag
aagagacccttcattgatgaggccaagcggttacgagccatgcacatgaaggagcacccg
gattacaaataccgtccccgcaggaagaccaagaccctgctgaagaaagacaagtattcc
ttgcccggaggactcttggcacccggtgccaacgctgtcaacaacgccgtctcagtgggc
cagcggatggactacacgcacatgaacggctggacgaacagcgcgtactccctcatgcag
gaccagctggcctacccgcagcatcccagcatgaacagcccccagatccagcagatgcac
cggtacgacatggcgggacttcagtacccgatgatgtccacggcccagacctacatgaac
gccgcgtccacgtacagcagcatgtcaccagcatacacgcagcagacttccagcgcaatg
ggtttgggctccatggcttctgtgtgcaagacggaacccagctctcctcctccggccata
acctctcactctcagcgcgcttgtttgggagacctgagggatatgataagcatgtatctg
ccccccggaggagaaagcgccgaccactccagcctacagaccagtcggttacacagcgtt
catccgcactatcagagcgcagggactggcgtgaacggaacgctacccctaacccacatt
tga
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