Garra rufa (doctor fish): 141288491
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Entry
141288491 CDS
T11039
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K28076
finTRIM family protein
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
grf04121
]
141288491
Ubiquitin system [BR:
grf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
141288491
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4_3
U-box
zf-RING_5
zf-RING_2
zf-RING_10
zf-RING_6
ANCHR-like_BBOX
MRP-S31
Motif
Other DBs
NCBI-GeneID:
141288491
NCBI-ProteinID:
XP_073676750
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Position
16:complement(40524994..40534779)
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AA seq
540 aa
AA seq
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MAEARVSQDEFLCAVCLDLLKDPVTTSCGHSYCKSCITDCWDQEDQMRVYSCPQCRQTFS
PRPALARNTMLAEVVEKLKKTKLPADCDAGAGDVECDVCTGRKYKAVKSCLVCLNSYCQN
HLEQHESLFKGKRHNLTDATGRLQEMICQKHEKILEVFCRTDQKCICVLCMDEHKKHEIV
SAAAQRTEKQKQLKETQKTFQQRIQQREKDVQQLREAVESHKRSAQTAVEDSERIFTELI
RSIERSRSELIRLIRDQEKRAVSRAEGRLERLEQEINDLRRRDAELEQLSHTQDHIQFLQ
SFQSLSAPPESTDVKDLFSSLFSFDDLRESVHQLRDKLEDFCKEELKKISDRVTFTNIVP
RTRNDFLQYSHQLTLDLNTVYKRLRLSENNRVITYTKTVQSYPDHPDRFDRCRQVLCRES
VCGRCYWEIEWSGYVFISVSYKSISRKGAGDECVFGSNDQSWSLICSSSRYLFRHNNIVT
DLHVKSIIGRIGVFVDHSAGTLSFYSVSDTMSLIHTVHTTFTQPLYPGFAFNVGSSVKLC
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagccagagtttctcaggatgagttcttgtgtgcagtgtgtctggatctcctg
aaggatccagtgacaacttcctgtggacacagttactgtaagagctgtattacagactgc
tgggatcaggaggatcagatgagagtctacagctgccctcagtgcagacagaccttcagt
ccaagacctgctttagctagaaacaccatgctggctgaagtggtggagaaactgaagaag
accaaacttcctgctgactgtgacgctggagctggagatgtggagtgtgacgtctgtact
ggaagaaaatacaaagctgtcaagtcctgtctggtgtgtctgaactcttactgtcagaat
caccttgaacaacatgagagtttgtttaaaggaaagagacacaatttgactgatgccact
ggacgactgcaggagatgatctgccagaaacatgagaagatccttgaggttttctgtcgc
actgatcagaaatgtatatgtgtgctgtgtatggatgaacataaaaaacatgagattgta
tcagctgcagcacagaggacagagaaacagaagcagctgaaggagacgcagaagacgttc
cagcagagaatccagcagagagagaaagatgttcagcagctgagagaggctgtggagtct
cataagcgctctgcacagacagcagtggaggacagtgagaggatctttactgagctcatc
cgctccattgagagaagccgctctgagctgatacggctgatcagagatcaggaaaagcga
gcagtgagtcgagcggaaggacgactggagcgactggagcaggagatcaatgatctgagg
aggagagacgctgagctggagcagctttcacacacacaggatcacatccagttcctgcag
agtttccagtctctctcagcacctcctgaatctacagatgtaaaagatctcttcagttct
ctcttctcttttgatgatctgagagaatctgtccatcagctgagagacaaactggaggat
ttctgcaaagaggagctcaagaagatctcagacagagtcacattcaccaacattgttccc
aggaccaggaatgacttcctacaatattcccatcagctcactctggatctgaacacagtg
tataaacgcctccgtctgtctgagaacaacagagtgattacctacaccaaaacagttcag
tcgtatcctgatcatccagacagatttgatcgttgtcgtcaggtgttgtgtagagagagt
gtgtgtggacgctgttactgggagattgagtggagtggatatgtgtttatatcagtgtca
tataagagcatcagcaggaagggagcaggtgatgagtgtgtgtttggatctaatgatcag
tcctggagtttgatctgctcttcctccagatacttattcagacacaataacatagtgact
gatctccatgtgaagtccatcattggtagaataggagtgtttgtggatcacagtgcagga
actctgtccttctacagcgtctctgacacaatgagcctcatccacacagtccacaccaca
ttcactcagccgctctatcctgggtttgctttcaatgttggatcatcagtgaaactgtgt
tga
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