Garra rufa (doctor fish): 141288530
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Entry
141288530 CDS
T11039
Symbol
ssrp1a
Name
(RefSeq) FACT complex subunit SSRP1a
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141288530 (ssrp1a)
03036 Chromosome and associated proteins [BR:
grf03036
]
141288530 (ssrp1a)
Transcription factors [BR:
grf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
141288530 (ssrp1a)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
141288530 (ssrp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
HMG_box
POB3_N
SSRP1_C
HMG_box_2
HMG_WDHD1
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
141288530
NCBI-ProteinID:
XP_073676788
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All DBs
Position
16:complement(42296732..42327293)
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AA seq
706 aa
AA seq
DB search
MGDTLEFNDIHTEVKGSWNDGRLRFSKQSVVYKSHKTGKVDSIPAPELSAAQWRRVCLGH
GIKLATSTGLVYRYDGFKDTDFDKISSFFKTNYKVELAERDMCVKGWNWGTAKFTGSLLS
FDVNDSPVFEVPLTSVSQCATGKNEVTVEFHQNDDAEVSLMEVRFYVPPNTGDDGSDPVE
AFAQNVLSKADVIQATGDAVCVFKELQCLTPRGRYDIRIYPSFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDLSLALNMSEDEVAKRYE
GKLSKNMSGPLYEIVSRVMKALVNRKITVPGNFQGHSGSQCITCAYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQNNQYTFSNIEREEYGKLFDFVN
AKKLNIKNRGFKEGMKGAEGYSDSDEDQHDAYLERMKEEGKIREEGDGSDESEGDSDESF
NPGEEDDDVPEEYDSNASVSESEEDGDSEDEGKKKKPEKKPKKVVKEKKERKPRKEKKVK
DAGAPKRPMSAYMLWLNGNRERIKSENPGISVTEISKKAGEMWKQLGKDRKEEWDKKAEE
AKRQYEKAMKEYRESGGGAAAAAASNTKEKKKKGGKVEAKRKSGGEKEKKKEGGNESFKS
KEFISSEESSSESDHDRGSKRKASDEEEEEEAASTPASSEEESGSD
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgggagacactctggagtttaatgacattcatacagaggtgaaaggatcttggaatgat
ggtcgtctgaggttcagcaagcagtctgtggtctataaaagccataaaacagggaaggtg
gacagtatcccagctcctgagctctctgcggcccagtggcgacgcgtctgtctgggtcac
gggattaaactggccacaagcactggactcgtctacagatatgacggattcaaagacaca
gactttgacaagatctcatcattttttaaaactaactacaaggttgagttggcagagagg
gacatgtgtgtgaagggctggaattggggcacggctaaattcacagggtctctgctgtca
tttgatgtgaatgacagtcctgtctttgaggtccctctgaccagcgtatcccagtgtgca
acgggaaagaacgaggtgactgtggagttccatcagaatgatgatgcagaggtgtcactc
atggaggtccgcttctatgtcccgcccaacaccggagacgacggctcagaccctgtggag
gcgttcgctcagaatgttctgtcaaaggcagacgtcatccaggctactggagatgctgtg
tgtgtctttaaagagcttcagtgccttacgccgagaggaaggtatgatatccgtatctat
ccctccttcctacatctgcacggtaagacgtttgactataagatcccctacaccaccgta
ctgcggctcttcctgctgccgcacaaggatcagaggcagatgttctttgtgatcagtctc
gacccgcctattaaacagggtcagacacgttatcatttcctcatcctcctcttctccaaa
gatgaagacctcagtcttgctctgaacatgagcgaggatgaggtggcgaagcgttacgaa
ggcaagctcagtaagaacatgtccgggccgctctatgagatcgtcagcagggtcatgaag
gctctggtcaacaggaagatcacggtgcctggaaacttccagggtcactcagggtctcag
tgtataacgtgtgcgtataaggcgagctcagggctgctgtatcctctggagcgtggcttc
atctatgtgcacaagccgccggttcacctgcgcttcgaggagatctcctgcgtcaacttc
gccagaggaaccaccaccactcgctccttcgacttcgaaatcgagaccaagcagaataac
cagtacaccttcagcaacatcgagagagaagaatacggaaagctgtttgactttgtcaat
gccaagaaactgaatatcaagaacagaggatttaaagagggcatgaaaggagcagaaggc
tacagcgactctgatgaagaccagcatgacgcttacctggagaggatgaaagaagagggc
aagatcagagaggagggagacggcagcgacgaatcagagggcgacagcgatgagtctttc
aaccccggagaagaggatgatgacgtcccagaagagtatgacagtaacgcttcagtgagc
gaaagcgaggaagatggagacagcgaggatgaaggcaagaagaaaaaacctgagaagaag
cccaagaaagtggtgaaggagaagaaagagcgaaaaccacggaaagagaagaaggtgaag
gacgccggggccccgaagaggccgatgagcgcatacatgctgtggctgaacggcaacaga
gagcgaatcaagagtgagaatcctgggatatcagtcacagaaatctccaagaaggctgga
gaaatgtggaaacagctgggcaaagaccgcaaagaggagtgggacaaaaaggctgaagag
gccaagagacaatatgagaaagccatgaaagagtacagagagagtggaggaggagcggcg
gcagcagcagcatctaatactaaagaaaagaaaaagaaaggagggaaggtggaagctaag
aggaagagtggaggagaaaaggagaaaaagaaggagggaggaaacgagagctttaagagt
aaagagttcatctccagcgaagagagctcatctgaatctgaccacgacagaggcagcaaa
cgcaaggcttctgatgaggaagaggaagaggaagcggcgtccacacccgccagctcagag
gaggagtcaggatctgactga
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