KEGG   Garra rufa (doctor fish): 141288678
Entry
141288678         CDS       T11039                                 
Symbol
rnf4
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
grf  Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:grf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:grf04121]
    141288678 (rnf4)
Enzymes [BR:grf01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     141288678 (rnf4)
Ubiquitin system [BR:grf04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    141288678 (rnf4)
SSDB
Motif
Pfam: zf-C3HC4_2 zf-RING_2 zf-C3HC4 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-C3HC4_4 zf-RING_4 zf-rbx1 RING_XB3-XBAT31 Prok-RING_4 zf_RING_Vps8 zf-UDP zf-RING_10 IBR_1 zf-Nse DZR Rad50_zn_hook zf-RING_6 zf-RING_16 zf-RING_11 zf-ANAPC11
Other DBs
NCBI-GeneID: 141288678
NCBI-ProteinID: XP_073676944
LinkDB
Position
16:10156895..10167470
AA seq 184 aa
MSTATQRKRRTSSAPCSRRGNSKRNRAQMSQTAMETIDVLESDRTNSEDVVDLTCEGSEP
AVVDLTNNDSIVVVEDGVQSRRGQGTESYVLSSDEEEESSLRLSPGLLSSLHASSRARST
PGAVSCPVCMDAYSEIIDSGRLMVSTKCGHLFCSQCIRDSLSRAHSCPTCRKKLTHKQYH
PIYI
NT seq 555 nt   +upstreamnt  +downstreamnt
atgagtactgctacacagaggaaaagacgaacatcatctgctccatgttcccgccgtgga
aacagcaagagaaaccgggcacagatgtctcaaacagcgatggagaccattgatgtactg
gaaagtgacagaaccaacagtgaagatgtggtagatttaacatgtgaaggatctgaacct
gcggttgttgacctcaccaataatgattctattgtggttgtggaagatggtgtgcaaagc
agacgtggacagggcacggagagttatgtactaagcagtgatgaagaggaagagtccagt
cttagactcagtccaggcttactgtcctctttacatgccagttcgcgggccaggtctaca
ccaggggcggttagctgtcctgtttgcatggatgcatattcagagatcatcgacagtggt
cggctcatggtctccacaaagtgtggccaccttttctgcagccagtgcatccgcgactct
ctcagcagagctcacagctgcccgacatgtagaaagaaactcacacacaaacagtatcac
ccaatatatatctaa

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