Garra rufa (doctor fish): 141288766
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Entry
141288766 CDS
T11039
Symbol
hars
Name
(RefSeq) histidine--tRNA ligase isoform X1
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
141288766 (hars)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
grf01007
]
141288766 (hars)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
grf03016
]
141288766 (hars)
Enzymes [BR:
grf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
141288766 (hars)
Amino acid related enzymes [BR:
grf01007
]
Aminoacyl-tRNA synthetase
Class II (A)
141288766 (hars)
Transfer RNA biogenesis [BR:
grf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
141288766 (hars)
Prokaryotic type
141288766 (hars)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
HGTP_anticodon2
tRNA-synt_2
WHEP-TRS
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
141288766
NCBI-ProteinID:
XP_073677036
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All DBs
Position
16:complement(17380505..17405940)
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AA seq
520 aa
AA seq
DB search
MNALGLVSMRLCAGLMGRRFAVNLPFLRLSSGMTLSQIDEEVAKLLQLKAQLGGDEGKHV
FVLKTAKGTRDYNPKQMAIREKVFNIIISCFKRHGAETIDTPVFELKETLTGKYGEDSKL
IYDLKDQGGELLSLRYDLTVPFARYLAMNKITNIKRYHIAKVYRRDNPAMTRGRYREFYQ
CDFDIAGQYDAMIPDAECLKIVYEILNELDLGDFRIKVNDRRILDGMFAVCGVPDEKFRT
ICSTVDKLDKMAWEDVKKEMVNEKGLPEDVADRIGEYVSMQGGKDLAERLLQDPKLSQNK
QACAGLTDMKLLFSYLELFQVTDKVVFDLSLARGLDYYTGVIYEAILSQTISAPVSTPTE
QNGADEGGVSVGSVAGGGRYDGLVGMFDPKGRKVPCVGVSIGIERIFSIMEQKAELSSEK
VRTTETQVLVASAQKNLLEERLKLTTELWNAGIKAELLYKKNPKLLSQLQHCEETGIPLV
AILGEQELKDGVVKLRNVASREEVDVPRADLVDEVKKRTL
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcactggggctggtctccatgcggctgtgtgctggactcatgggtcgtcggttt
gctgtgaacctgccatttctgcgcttgtcttctggaatgactttatcacagattgacgaa
gaagtggccaaactgttgcagctcaaagctcagctgggaggcgatgagggaaaacatgtc
ttcgttctcaagacagccaaggggaccagggactataaccccaagcaaatggctatcaga
gagaaggttttcaacatcatcatcagctgctttaaacgccatggtgctgaaaccatcgat
acccccgtctttgagctgaaggaaacattgacagggaagtacggtgaagactcaaaactc
atctacgatctgaaagaccagggaggagaacttctttctctgagatatgacctcactgtc
ccatttgctcgctatcttgcaatgaataaaatcaccaacattaagcgctaccacattgct
aaagtgtatcgcagagacaacccagccatgacccgcggccgttacagggagttctaccag
tgtgatttcgatattgcaggtcagtacgatgctatgatccctgatgccgagtgtctgaaa
atcgtctatgagatcctgaacgaattagatcttggagattttcgtattaaggtgaatgac
agacgcattctagatggaatgtttgctgtgtgtggcgttcctgacgagaagttccgcaca
atctgctcaacagtggacaaactggacaagatggcctgggaggatgtaaaaaaggaaatg
gtgaatgagaagggtcttccagaggatgtggccgatcggatcggggagtatgtcagcatg
caaggtgggaaagatctggccgagcggctgcttcaggatcccaaactgtcccagaacaaa
caggcctgcgctgggctcacggatatgaagctgctcttcagctacctggagctcttccag
gtcacagacaaggtggtgtttgatttgagtctggctcgaggactggactactacactggt
gtgatttatgaagcgattctctcccagactatctcagcaccggtgtccacacccacagag
cagaacggggcagatgagggtggcgtgagcgttggtagtgtggccggtggtgggcgatac
gatggtctggtgggcatgtttgaccccaaaggcaggaaagtgccctgtgtgggtgtcagc
attgggattgagaggatcttttccatcatggagcagaaggccgagttgtcttcagagaag
gtgcgcaccactgaaactcaagtgctggtggcctcagcgcagaagaaccttctagaagag
cgactcaaactaaccactgagctttggaacgctggaatcaaggctgaacttttatacaag
aaaaacccaaagctgttgagccaactgcagcactgtgaggaaactgggattccactggtg
gccattttaggagagcaagaactcaaagacggagtcgttaaacttcgcaacgttgccagc
cgagaagaggttgatgtgcccagagcagatctcgtggatgaggtcaagaaacggaccttg
taa
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