Garra rufa (doctor fish): 141288844
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Entry
141288844 CDS
T11039
Symbol
lhfpl2b
Name
(RefSeq) LHFPL tetraspan subfamily member 2b
KO
K23893
LHFPL tetraspan subfamily member protein
Organism
grf Garra rufa (doctor fish)
Pathway
grf04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
141288844 (lhfpl2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
grf02000
]
141288844 (lhfpl2b)
03037 Cilium and associated proteins [BR:
grf03037
]
141288844 (lhfpl2b)
Transporters [BR:
grf02000
]
Other transporters
Pores ion channels [TC:
1
]
141288844 (lhfpl2b)
Cilium and associated proteins [BR:
grf03037
]
Other cilia and associated proteins
Stereociliary proteins
141288844 (lhfpl2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
L_HMGIC_fpl
Claudin_2
Motif
Other DBs
NCBI-GeneID:
141288844
NCBI-ProteinID:
XP_073677114
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All DBs
Position
16:19611660..19626225
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AA seq
221 aa
AA seq
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MCHVIVTCRSMLWTLMSIVVAFAELVAFMSAEWLVGYPDGSEFNFTITASHHSNQRTLGI
YNRCIKVAQQKVVQCGPYATDFMEIASGFWQATVIFLVVGIFLLSVVGILSVFSMCFQSI
LKKSIFNVCGLLQGIAGLFLILGLMLYPAGWGSKKVVDYCGPDASPYKVGLCSLGWAFYT
AIGGTVLTFICAMFSAQAEIATSSDKVQDEIEEGRSLICVL
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcacgtcatagtcacatgccgctctatgttatggaccttgatgagcattgtggtg
gcctttgctgagctggtggcatttatgagcgctgaatggctagtgggatatccagatggt
tctgagttcaacttcaccatcaccgcttcacaccacagcaaccagcgcaccttgggtatt
tataatcgttgcatcaaggtggcacagcagaaggtggtccagtgtgggccctacgccaca
gacttcatggaaatagccagtggcttctggcaagccactgttatatttctagtcgttgga
atctttctcctgtccgtagtgggcatcctttcggttttcagcatgtgcttccagagcatc
ctgaagaagagcatattcaatgtgtgtggcctactgcagggaatagcaggtctattcctc
atcctaggtctgatgctctatcctgcaggttggggctctaagaaagtggttgactactgt
ggcccagatgcttccccatataaagtgggcctgtgttctctgggctgggccttctataca
gccataggaggcactgttctcacttttatctgtgctatgttttcagcccaggctgagatt
gccacctccagcgacaaggtgcaggatgagattgaagagggacggagtctcatttgtgtg
ctgtga
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