KEGG   Garra rufa (doctor fish): 141289005
Entry
141289005         CDS       T11039                                 
Symbol
pcdh20l
Name
(RefSeq) protocadherin-20
  KO
K16498  protocadherin delta 1
Organism
grf  Garra rufa (doctor fish)
Pathway
grf03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:grf00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    141289005 (pcdh20l)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:grf01009]
    141289005 (pcdh20l)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:grf04515]
    141289005 (pcdh20l)
Protein phosphatases and associated proteins [BR:grf01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     141289005 (pcdh20l)
Cell adhesion molecules [BR:grf04515]
 Cadherins
  Protocadherins
   141289005 (pcdh20l)
SSDB
Motif
Pfam: Cadherin Cadherin_2 TM_ErbB1
Other DBs
NCBI-GeneID: 141289005
NCBI-ProteinID: XP_073677298
LinkDB
Position
16:4438043..4440505
AA seq 820 aa
MASAGQIHSSALCFTILEEQEAGVKIGSLSTTYSAPYRLLNERYIRVDESTGDLFTKERI
DRETLCPSHEDGDCTFSNTAVVSLNFEVVQMIIVVDDINDNAPVFERNEIPLHIPEDVSV
GTAFPLDDQAQDKDTGNNGLIHYHLKNSGGFFAIRQDEHEVELVVLRELDRETQGNHILV
LVAVDGGSVPLSATVNLSVTVTDVDDNCPEFDADSPITAIVLALGIKGTAVAQLKATDKD
LGQNAQITFSFSRQISDRAKVLFDLDGHTGLISLAVDVQVDSPEEHTLKVLANSPLCPPA
QTQVTVYIQPVASPEPSIKIRFVTEHKNQVIVLQENEPPTVLALLELGDTSTAKGTLSLD
TDSMPFSLKPQAGSYLLSTSKPLDFEMCSEYNVTVIISDPHGTRLHRREVIKVLVEDVND
NSPKFEQARYEKDIKENSEPGEFLLKVQATDADSHQFGKVRYRLRNGGPFRIHEETGLIS
VAESLDREQQETYILKVLARDGGDPPQEGFAIVSVNVLDLNDNPPAFPTPHFYFFISESI
SQLSQVGKVTVSDADKGDNGLIVDVRILNENVPFAIDLVQRSLRSTGEVDREKQDRYDLL
VVAVDGGSPALSTTVKMTVFIEDVNDNQPQVLLPSSNLSCLTISPATRAGSMVTKIYAID
EDSGMNSDITYQIIATKPALHSPFQIDQHSGNITLVQHLSGEDYGMHHLFIVVRDGGKPD
PLQTTVWVNLLVNETLEKCHINAVPDYLPQRLPPPLPVKDCKCESNAWLIFYCGLCLLVI
SVCVLLAVTVVFIKRKNTKRKEEKKNVWETGNLCELKPLN
NT seq 2463 nt   +upstreamnt  +downstreamnt
atggcatctgctgggcaaatccatagcagtgctctgtgtttcaccatcctggaggagcaa
gaagcaggcgttaagatcggaagtctaagcacgacctactcggctccataccggctcctt
aatgaaagatacattagggtggacgagagcacaggggatctgtttaccaaagagcgcata
gacagagagactttgtgcccatcacatgaggatggggactgtactttttcaaatactgcg
gtcgtgagtcttaattttgaagtagtgcagatgataattgttgtggatgatattaatgac
aacgctcctgtttttgagagaaatgagattcctctacacatacctgaagatgtatcagtt
gggactgctttcccactggatgaccaagcccaggataaggatacaggaaataatggcttg
atacattaccatttaaaaaactctggtggcttttttgccatcagacaagatgagcatgaa
gttgagctggtggtactaagggagctagaccgggaaactcagggaaatcacatcttggtc
cttgtagcagtagatggaggttcagtaccacttagcgctacagttaatctcagtgtaact
gtaaccgatgttgatgacaactgcccagagtttgacgccgacagccccatcacagccatt
gtgctagcattaggaatcaaggggactgcggtggcacagcttaaagccacagacaaagac
ctcggccaaaatgcccagatcacattctccttcagccgtcagatctcagacagggccaaa
gtgctctttgacttggatggacacacaggcctgatcagcttagctgttgatgtgcaggtt
gacagtcctgaggagcacacgttgaaagtccttgcgaatagcccactttgcccccctgca
caaacccaggtaaccgtatacattcagccagtggcgagcccagagccgtccataaagatc
aggtttgtcactgagcataaaaaccaagtgatcgtgttacaagaaaacgagccccccact
gtcttagccctcttggagttgggagacacctctactgctaaaggtactctgtccttagat
acagacagcatgccgttttctttgaagccgcaagcaggcagctatttgctttcaacatca
aaacccctagattttgagatgtgcagcgagtataatgttacagtgattatttctgatcct
catggcacacgcctacacagaagggaagtgatcaaagtgctagttgaagatgtgaatgat
aattccccgaagtttgaacaagcacgctatgaaaaggacatcaaggagaacagcgagcct
ggagagtttctgctgaaagtccaggctaccgacgcagatagccaccagtttggcaaagta
aggtacaggcttagaaacggaggacctttcagaattcacgaagagacaggtttgatatcg
gtggctgagtctttggatagagaacagcaggagacatacatcctgaaagttctggccagg
gacggtggcgatccacctcaggagggctttgctattgtctctgtaaacgtactagatctt
aatgacaatccaccagcctttccaaccccacatttttatttctttatatctgagagcatt
tcacaactttcccaagttgggaaagtcacagtaagcgacgctgataaaggagacaacggc
ctgatagtggatgtccgtattttaaatgaaaatgtcccttttgccatagacctggtgcaa
agatcactccgcagtactggtgaagttgaccgtgagaagcaagaccgctatgacctgctg
gttgtagccgtagatggcggtagcccagctctttctaccacggtaaaaatgaccgttttt
attgaggatgtcaatgataatcaaccccaggtccttcttcctagcagcaacctctcctgt
ctgaccatatccccggctacccgagcaggaagcatggtaacaaagatttacgccattgat
gaggactcaggaatgaattcggacatcacctaccaaattatcgcaaccaaaccggctctc
cacagccccttccaaattgaccagcactcaggaaacatcactctggttcagcatcttagt
ggtgaggactacggcatgcaccatctgttcatagtcgttcgcgacggaggaaagccagac
ccgctgcagactacagtgtgggtcaacctgctggtcaacgagactttagaaaaatgtcac
ataaatgctgttccagattacttgccacaacgattgcctcctccgttgcctgtcaaagac
tgtaaatgtgaatcaaatgcctggcttattttttattgtggcctgtgtctgttggtcatc
tcagtctgtgttcttctggcggttacagtggtgtttataaagcgcaaaaacacaaaaagg
aaagaagaaaaaaagaacgtatgggaaactggaaatctctgtgaactgaaacctttaaac
taa

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