KEGG   Garra rufa (doctor fish): 141289028
Entry
141289028         CDS       T11039                                 
Name
(RefSeq) small ribosomal subunit protein RACK1
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
grf  Garra rufa (doctor fish)
Pathway
grf03010  Ribosome
Brite
KEGG Orthology (KO) [BR:grf00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    141289028
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:grf03019]
    141289028
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:grf04147]
    141289028
Messenger RNA biogenesis [BR:grf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     141289028
Exosome [BR:grf04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   141289028
  Exosomal proteins of colorectal cancer cells
   141289028
  Exosomal proteins of bladder cancer cells
   141289028
SSDB
Motif
Pfam: WD40 Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_Gbeta WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_EML_2 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_SPT8 Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_EML WD40_MABP1-WDR62_1st DSE1_N Beta-prop_EIPR1 Beta-prop_RIG_2nd TRM82_WD Beta-prop_SCAP WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_VPS8 Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_DCAF12 ASA1 Beta-prop_WDR41 CFAP251_N Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_NOL10_N Beta-prop_DCAF4 Beta-prop_IFT140_1st eIF2A Beta-prop_NWD2_C Beta-prop_ACSF4 Beta-prop_Vps41 Beta-prop_WDR75_2nd Cytochrom_D1 Tricorn_2nd Beta-prop_NUP159_NUP214 Beta-prop_pof12 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 141289028
NCBI-ProteinID: XP_073677317
LinkDB
Position
16:complement(45558167..45562917)
AA seq 317 aa
MTEQMTVRGTLKGHSGWVTQIATTPQFPDMILSASRDRSIIMWKLTRDETNYGIPQRALK
GHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQI
VSGSRDKTIKLWNTLGVCKYTIQDDSHSEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLA
NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDSGDNINALC
FSPNRYWLCAATGPSIKIWDLEGKIIVDELRQDIITTNSKAEPPQCTSLAWSADGQTLFA
GYTDNLIRVWQVTIGTR
NT seq 954 nt   +upstreamnt  +downstreamnt
atgaccgagcagatgacagtaagggggaccctaaagggtcatagtggatgggtcacccaa
attgccacaacaccccaatttcccgacatgattctgtccgcgtcccgggacaggtccatc
attatgtggaagctgacccgtgatgagaccaactatggcatccctcagcgtgctctgaag
ggccattcccactttgtgagtgatgttgtcatctcatctgatggtcagttcgccctgtct
ggctcttgggacggcaccctgcgcctgtgggatctgacaactggcacaacaacccgtcgt
tttgttggacacaccaaggatgttctgagcgtggctttctctgctgacaaccgtcagatc
gtgtctggatccagagacaagaccatcaagctgtggaacaccctgggtgtctgcaagtac
accatccaggatgacagccacagtgagtgggtgtcgtgcgtgcgtttctctcccaacagc
agcaaccccatcattgtgtcctgcgggtgggacaaaatggtcaaggtatggaatcttgct
aactgcaagctaaagaccaaccacattggccacactggatacctgaacacagtgactgtg
tctcctgatggatctctgtgtgcctctggtggaaaggatgggcaagcaatgctgtgggac
ctgaacgagggcaagcacctttacaccctggacagtggtgacaacatcaacgccctttgc
ttcagccccaaccgctactggctgtgtgccgccactggacctagcatcaagatctgggat
ctggagggcaaaattattgttgatgaactgaggcaggacatcattaccaccaatagcaag
gctgagccacctcagtgcacttctctggcctggtctgctgatggacagactctctttgct
ggctacactgacaacctgataagagtgtggcaggttaccattggaaccagatag

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