Garra rufa (doctor fish): 141289045
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Entry
141289045 CDS
T11039
Symbol
gabra6a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6a isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
grf Garra rufa (doctor fish)
Pathway
grf04080
Neuroactive ligand-receptor interaction
grf04082
Neuroactive ligand signaling
grf04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
141289045 (gabra6a)
04082 Neuroactive ligand signaling
141289045 (gabra6a)
04519 Cadherin signaling
141289045 (gabra6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
grf04040
]
141289045 (gabra6a)
Ion channels [BR:
grf04040
]
Ligand-gated channels
GABA-A
141289045 (gabra6a)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
141289045
NCBI-ProteinID:
XP_073677335
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All DBs
Position
16:42534847..42558034
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AA seq
459 aa
AA seq
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MALLLALLCLTSVADVLGKQRINSENITRILDRLLEGYDNRLRPGSGVSITEVKTDIFVT
SFGPVSDVKMEFTMDMFFRQMWVDERLAFEGPIEILPLNNRMVDKIWTPDTFFRNARTSL
LHNMTSPNKLFRIMQNGTVFYTMRLTVSAECPMVLMDFPMDGHTCPLLFGSCKICLSVFT
SICPSTIFQLHTVFSDAYTNREIVYTWRKGLQASVDFPPESSSLLQYDLLGQTLFSKTYK
FSTGLYSVQVVHFYLQRKLGYHLIQTYIPLIMVVVLSQVAFWINKESVPARTVAGITTVL
TMTTLSISARSSLPKVSYATAMDWFIAVCFAFVASALVEFAAVNYFATLEANREKRRLSR
ASVLESIAQGSDDEPETPQSDTSGFSRRRRANSVSEAPRTRFPIFLQGSAVPPNMMLAGT
SNIDKYARIFFPLAFGLFNLIYWYIYLSKDTLEKPREIE
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggctcttcttttggccttgttatgcctcacaagtgttgcagatgtattaggaaagcaa
aggataaattctgaaaatataactcggattctagaccgacttcttgagggttatgacaat
cgactacgcccgggatccggagtctctataactgaggtgaaaacagacatatttgtcaca
agttttggaccagtatctgatgttaagatggagttcaccatggatatgtttttccgccaa
atgtgggttgacgagaggttagccttcgaggggcccattgaaatcttgcctttgaacaac
cgcatggtggacaagatctggacgcccgacacgtttttccgcaacgcgaggacgtcgctc
ttacacaacatgacgtctccaaacaagctgtttcgaattatgcaaaacggaactgttttt
tacaccatgaggctgactgtaagtgctgaatgtccaatggtgttgatggacttccctatg
gatggacacacatgtcctcttctgtttggaagctgtaagatctgtctgtctgtttttaca
tccatctgtccctccaccatttttcagctgcatactgtgttttcagatgcttacaccaat
cgtgaaattgtctacacatggaggaagggtcttcaggcatcggtagattttcctccagaa
tcgtcaagcttacttcagtacgaccttctgggccagactttgttcagcaaaacatataaa
tttagtacaggtctgtattccgtccaggttgtccatttctatcttcagaggaagcttggc
taccatcttatccaaacgtacatcccattgattatggtggttgtgctgtcacaagtcgca
ttctggatcaacaaggagtctgttccggctcgaacagtggctggaatcaccactgtgctc
accatgaccactctgagcatcagtgcccgctcctcactgcctaaagtctcctatgccact
gccatggactggttcattgccgtctgctttgccttcgtggcttcggccctcgttgagttt
gctgcggtcaactactttgccacgctcgaggccaacagggaaaaacgccggctctcaagg
gcctccgttcttgagtccatagctcagggcagcgacgacgagccagagacgcctcagtct
gataccagtggctttagccgcagaagacgggcaaactctgtgtccgaggcacccaggact
cgctttcccatcttccttcagggctcagctgtcccacccaacatgatgttggcaggcacc
agtaacatagacaaatacgcccgcatcttcttccctttggcctttgggctcttcaacctc
atctactggtacatatacctcagcaaagacaccttggaaaagcccagggagatcgagtga
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