Garra rufa (doctor fish): 141289262
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Entry
141289262 CDS
T11039
Symbol
vps28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
KO
K12184
ESCRT-I complex subunit VPS28
Organism
grf Garra rufa (doctor fish)
Pathway
grf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141289262 (vps28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141289262 (vps28)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
grf04147
]
141289262 (vps28)
Membrane trafficking [BR:
grf04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
141289262 (vps28)
Exosome [BR:
grf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
141289262 (vps28)
Exosomal proteins of other body fluids (saliva and urine)
141289262 (vps28)
Exosomal proteins of colorectal cancer cells
141289262 (vps28)
Exosomal proteins of bladder cancer cells
141289262 (vps28)
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Gene cluster
GFIT
Motif
Pfam:
VPS28
Motif
Other DBs
NCBI-GeneID:
141289262
NCBI-ProteinID:
XP_073677457
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All DBs
Position
17:27099871..27104556
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AA seq
223 aa
AA seq
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MFHGIPASGVMGGAPPNKPELYEEVKLYKNAREREKYDNMAELFAVVKTLQALEKAYIKD
CVTPNEYTGACSRLLVQYKAAFKQVQGSDVGSIDDFCRKYRLDCPLAMERIKEDRPITIK
DDKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSNMPPDSEAKDK
VSLWLTTLSSMSASDELDDSQVRQMLFDLESAYNAFNRFLHSS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgtttcatggaatacctgcctctggagtgatgggaggagcacctcccaacaagccagaa
ctgtatgaggaagtgaaattgtacaaaaatgccagagaaagagaaaagtatgacaacatg
gcagagttgtttgctgtggtcaaaacactccaggccttggaaaaagcctacattaaggac
tgtgtgactccaaacgaatacacaggagcttgctcaagattgcttgtccagtacaaggct
gctttcaaacaagtccagggatcagatgtgggatccattgatgacttttgtcggaaatac
aggctggactgtccactggctatggagaggattaaagaggatcgaccaatcaccattaaa
gatgacaagggcaacctgaatcgctgcattgcagacatagtttctctctttatcacagtg
atggacaaacttcgacttgagattcgtgccatggatgagatccagcctgacctgagagaa
cttatggagaccatgaatagaatgagcaacatgcctccagattcagaggccaaagacaaa
gtcagcctctggttaaccacactaagcagcatgtctgcatctgatgagctggatgattcc
caggttcgccagatgctctttgacctggagtctgcctacaacgcctttaatcgtttctta
cactcctcttaa
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