Garra rufa (doctor fish): 141289272
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Entry
141289272 CDS
T11039
Name
(RefSeq) glutamate receptor ionotropic, kainate 5 isoform X1
KO
K05205
glutamate receptor, ionotropic kainate 5
Organism
grf Garra rufa (doctor fish)
Pathway
grf04080
Neuroactive ligand-receptor interaction
grf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
141289272
04082 Neuroactive ligand signaling
141289272
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
grf04040
]
141289272
Ion channels [BR:
grf04040
]
Ligand-gated channels
Glutamate (ionotropic)
141289272
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Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
141289272
NCBI-ProteinID:
XP_073677497
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Position
17:complement(37828963..37963501)
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AA seq
1071 aa
AA seq
DB search
MPALPALLLSIHLLFLLLLLLLLTMAPSSHSQTPALAAVRMAAILDDQSACGRGERLALA
LARENINSAMEGPARARVEVDIFELQRDSQYETTDTMCQILPKGVVSVIGPASSPASGST
VSHICGEKEIPHIKIGPEETPRLPYLRFASVTLYPSNEDLSLAIGAILRSFSYPTTSLIC
AKAECLLRLEELVRHFLISRETLSIRMLDENLDPTPLLKEIRDDKVATIIIDANASVSIL
ILKKASELGMTSAFYKYILTTMDFPLLRLDDVVDDQSNIVGFSMLNSSHPFYLEFIRSLN
LSWREGCDISPYPGPALSSALMFDAVHVVVGAVRELNRSQEIGVKPLSCTSSLIWQHGTS
LMNYLRMVEYDGLTGRVEFNSKGQRTNYTLRILEKFKGGHKEIGVWYSNNTLAMNSTSLD
INTSETLANKTLIITTILEDPYVKRKANYQDFQGNDQYEGFCVDMLRELADILKFSFRIK
LVDDGLYGAPEPNGSWTGMVGELINRKADLAVAGFTITSEREKVIDFSKPFMNLGISILY
RVHIGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYNPFPCLRDRRDL
LENQYTLGNSLWFPIGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTV
QRMEVPIESADDLADQTNIQYGTIQGGSTMTFFMNSRYQTYQRMWNYMYSKQPSVFVKST
EEGIARVLNSKYAFLLESTMNEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLG
VLQLQENNRLEILKRRWWEGGKCPKEEDHRAKGLGMENIGGIFVVLICGLIIAVFVAIME
FVWSTRRSAETDEVRPHSCPLRNHRHSRVSVCQEMMTEFRNVISCKKNSRLRRRRPLSSQ
GILRNPARLPLGAPRPMRLVREMRLSNGKLYSGTGPLTGAAAGPGPVGGAAEMGPGPQRL
LEDPLSASVPSSAPALVPTAAPRGCTHVRVCQECRRIQSLRSTSSCSRISPLASATSSLP
RLPPPPPSASNTNTDSEGGGSGSPRRAKPTPPPRPLPPTKTPSTDLLCKQD
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgccggctctgccagcgctgctgctgtcgattcacctcctcttcctcctcctgctgttg
cttctgctgaccatggccccgtcctctcacagccagacgcccgctcttgcagctgtcagg
atggctgctattttagatgatcagtcagcgtgcggacgtggagagcggttggcattggct
ctggcccgagagaacatcaacagtgcgatggagggcccggcacgagcccgtgtggaggtc
gacatctttgagctgcagagagactctcaatacgagactacagacacgatgtgtcagatc
ctgccaaagggagtggtctctgtcattggtcccgcctctagtcctgcttccggatccacc
gtcagtcatatatgtggggaaaaagagatccctcacatcaagattggtccagaggagact
ccgcgcttgccatatctgcgctttgcctcagtgacgctgtatcctagcaacgaggactta
agcttggccatcggtgccatcctgcgctctttcagttacccgacgaccagcttgatttgt
gccaaagcagagtgtctgctgcgattggaggagcttgtgcgtcacttcctcatatcccgg
gaaacactttcaatcagaatgcttgatgaaaatttggaccccacccccctgctgaaggaa
atccgtgatgacaaagttgcaactatcatcattgatgccaatgcatcagtgtcaatacta
atacttaagaaggcctcagaattaggcatgacgtcagccttctacaagtacatcctcaca
acaatggatttccctctgttgaggttggatgatgtggtagatgatcagtcaaacattgtt
ggcttctccatgctgaacagcagtcatcctttctacctagagttcatcaggagtctaaac
ctgtcatggagggaaggttgtgacatcagcccctatcctggtccagcgttgtcatctgcg
ctgatgttcgatgctgtgcatgtggtggtcggagcggtgcgagaactcaaccgcagtcaa
gagatcggagtgaagcctctgagttgcacgtcttcactcatctggcagcacggcaccagt
ctcatgaactacctgcgcatggtggagtatgacggcctaacaggccgcgtggagtttaac
agcaaaggccagaggaccaattacacgctgcgtattcttgagaaattcaaggggggtcac
aaagagatcggtgtgtggtactctaataacacgttggctatgaactccacatctttagac
atcaacacgtctgagaccttagccaacaagacgctcatcatcactacaatactggaagat
ccatacgtgaagcgcaaggcaaactaccaggactttcagggaaacgatcagtacgaggga
ttctgtgtggatatgctgcgggagctggcagacatactgaagttttccttccggatcaag
ctggtggatgacgggctgtatggagctccagagcctaatgggtcatggactggcatggtg
ggggaactcatcaacaggaaagcggatttggcggtggctgggtttactatcacatcggag
agggagaaggtcatcgatttctccaaacctttcatgaaccttggcattagtatcctgtac
cgcgtacacataggcaggaagccaggttatttctccttcttggatcccttttcgccagct
gtctggctatttatgcttttagcctatctggccgttagctgtgtgctcttcctggctgcc
aggctgagtccgtacgagtggtacaacccttttccgtgtttgcgggaccgcagggacctg
ctggagaatcagtacacgctggggaacagcctgtggttcccgatcggtggtttcatgcag
cagggctcagagatcatgccccgggctctgtccacacgctgtgtcagcggtgtttggtgg
gcattcacgctgatcatcatatcctcctacacagcgaaccttgcagcttttctgacagtc
cagaggatggaggtgccaattgagtctgctgatgacttggccgatcagacgaacatccag
tatgggactattcaaggaggaagtactatgaccttcttcatgaactcgcgctaccagacg
taccagcgcatgtggaattacatgtactccaagcagcccagcgtgtttgtgaaaagcacg
gaggagggcatagcgcgggtgttaaactcaaagtacgcctttcttctggaaagcactatg
aacgagtaccaccgacgcctcaactgcaacctcacgcagatcggaggcctgctggacacc
aagggctacggcatcggcatgcctctgggttcacctttcagagatgagatcacgttaggc
gtactgcagctgcaagagaacaacagattagaaatcctaaagcgtcgatggtgggagggt
ggaaagtgtcctaaagaagaagaccatcgagccaaaggtctaggtatggagaatatcggc
gggatattcgtggtgctgatatgtgggctcataatagctgtttttgtagccattatggag
ttcgtgtggtccacgcgccgctcggccgagacagatgaggtacgccctcactcctgcccc
ctccgaaaccacagacactcacgagtgtcagtatgtcaggaaatgatgactgaattcaga
aacgttatctcctgtaaaaagaactctcgtttgcggcgccgacgacccctctcgtcccag
ggtatcctccggaacccggcccgtctccctttgggagctccccgtccgatgcggctcgtg
cgggagatgcgtctcagcaacggcaaactctacagcgggacaggaccgttaaccggcgcc
gctgcaggaccgggacccgttgggggcgctgcagaaatgggcccgggccctcagcgattg
ctggaggaccctctcagtgccagcgtccccagtagtgcacccgctctggttcccacggcg
gcgccacgtggctgcacgcacgtacgggtttgccaagagtgccggcggatccagagcctc
cgctccacgtcatcctgctcgcgcatctcaccgctggcctccgccacatcctctctacca
cgtttgccaccaccgcccccttccgcctctaacacaaacaccgacagcgagggaggaggt
tcgggcagcccacgcagggccaaacccacgccccctccaaggccgctgccccccactaaa
actccctctactgatctcctctgcaagcaggactga
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