Garra rufa (doctor fish): 141289316
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Entry
141289316 CDS
T11039
Symbol
ptprua
Name
(RefSeq) receptor-type tyrosine-protein phosphatase U
KO
K16662
receptor-type tyrosine-protein phosphatase U [EC:
3.1.3.48
]
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
grf01009
]
141289316 (ptprua)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
grf04515
]
141289316 (ptprua)
Enzymes [BR:
grf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
141289316 (ptprua)
Protein phosphatases and associated proteins [BR:
grf01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
141289316 (ptprua)
Cell adhesion molecules [BR:
grf04515
]
Immunoglobulin superfamily
Type II RPTP family
141289316 (ptprua)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fn3_PTPRU
Y_phosphatase
MAM
fn3
Ig_DSCAM-DSCAML_C
PTP-SAK
Pur_ac_phosph_N
DSPc
Motif
Other DBs
NCBI-GeneID:
141289316
NCBI-ProteinID:
XP_073677538
LinkDB
All DBs
Position
17:20177707..20582162
Genome browser
AA seq
1509 aa
AA seq
DB search
MAPTLLHTAPPLRNPAINCLPAWISHPPSLPLSLSLLLPPFNPAAAALSQLSPDSPSVQP
QPTICAVGAPWVCQSPLASWLENPLSPPTASESRSPPRPFDPAAPGSLISPVTHRPTSST
GLPWSVVVPPSPQDSTPPAAPHCFVPPAPLDSSLHLRLRPPDLRIGRLSLGFHFGPPNHR
LFISSLGSTSTCSASVISPSSTMPPPSIASTVGYHHGCDQAGCTFEEDSDPSLCEYRQAQ
EDDFDWQLVRTYSWPHMTSDLIRGSYMLVNSSQYGAGQRAQLMLRPLSENDTHCVQFSYF
LYSRDGHSPGGLNVYVRVNGGSRGNAVWNVSGSQGRQWHQVEMAVSTFWPSEYQIVFEAT
VSSEQKGYIGLDDIVLLNYPCYKVPHFSRLGDVEVNAGQNATFQCVATGRSTRSDPFLME
RRNGVLMSPYTVTSSVGERRLVAWFQVGGAQRGEQDLYRCITQSTYGAAVSNFAELIVRV
PPTPIAPPQLLRSGPTYLIIQLNTNSIVGDGPVIRREIVYRASHSPWSETHGVNSLTYKV
WHLEPDTEYRISVLLTRPGEGGTGPPGPPLVSRTKCAEPMRPLRGLTASEIQSRQLLLQW
EPVGYNLTRCHTYSLSLCYRYSTAAGGGAGGNNATVRECLSVERNTSRFTLRDLPPFHAV
HVRLALANPEGKKESREVTFQTEEDIPGGIAPESLTFTPLDDMIFLKWEEPLEPNGLITQ
YEISYQSIESSDPSINVPGPRRTVSKLKNETYHMFSGLHPGTTYLVSVRARTAKGFGQTA
LTEITTNISAPAFDYEDVPTPLSESESTITVLLRPALGRGAPVSTYHVVVVEEDGSRQVR
RRELGHIECFPAPSSHGESPGGGGGGGGGGGGGGGGGASGAPPHYYTAELTPSSLPEATP
FTVGDNHTYNGYWNTPLDPGKNYLIYFQASSNFRGETRINCIRIARKEACKDHKRALEVS
QHAEDMGLILGACAGGLVVLILLLGAIVVIVKKGRDIYSYPYYPRKKVNINKAVMTYRQE
KTRKLGSLDCSTTEHSTLQQDDRTAHTFMDSHNCTARNEQRSTVNESSSLLGGSPRRLCR
RKSSPYHTGQLHPAVRVADLLQHINQMKTGEGYGFKQEYESFFDGWDINEKKDKTKGRQD
TLLGQDRHRVKMHSLLADPNSDYVNANYIDIRINRELNVQSQLQQWREFGDNNGEQYIFI
HDAILEACLCGETAIPISEFALTYKDMLSVDSQTNTSQLREEFQTLNSVTPHLDVEECSV
SLLPRNREKNRSMDVLPPDRALAFLVSTEGDGNNYINAALMDSFLQPAAFVVTPHPLPTT
TADFWRLVFDYGCTSIVMLNQLNQSNSAWPCLQYWPETGMQQFGPMTVELLSRSTDDNIV
TRLFRVANITRLQEGHLVVRHFQFLRWSAYREIPDSKKAFLNLLAQVQKWQRECGDGRTV
VHCLNGGGRSGTFCTCTMIMEMVHHHNMVDVFYAVKTLRNSKPNMVESMDQYRFCYELAL
EYLDCLEVR
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atggccccaaccctgctacacactgcacctccgctgaggaaccctgccataaactgccta
cctgcctggatttctcacccaccctcccttcctctctctctctctctcttgcttcctcca
ttcaaccctgccgccgcagctctgtcacagctgtctcctgacagcccttcagtgcagcct
cagcccaccatctgtgcggtgggcgcaccttgggtctgccagtctccattggcatcatgg
ctagagaatcccttgtctccacctaccgcctctgagtcccggagtccgcctcggcccttc
gacccagcggctccaggctccctcatctcccctgtcacccatcggcccaccagctccacc
gggctcccttggtcggtcgtcgtcccaccatcgcctcaggactccactcctccggctgcg
cctcattgcttcgtcccaccagctccgttggactcctccctccatctccgccttagacct
ccggatctccgcatcggtcgcctgagccttgggttccactttggccctcccaatcatcgg
ctcttcatctcctccttgggctccacctccacctgttctgcctctgtcatcagcccttcc
tccaccatgcctcctccctccatcgcctccaccgtgggctaccatcatggctgtgaccag
gctggctgcacgtttgaggaagactctgaccccagcctatgtgaatacagacaggcacag
gaagatgattttgattggcagcttgtacggacctacagctggccgcacatgacctctgac
cttatacgaggctcctacatgctggtgaactcttctcagtatggtgcaggacagcgggct
cagcttatgctacgtcccctgagtgaaaacgacacgcattgtgtccagttcagttatttc
ctgtacagccgtgatggacacagtcccggaggcctgaacgtgtatgtgcgtgtaaacggc
ggctcgcggggaaatgccgtgtggaatgtgtctggctctcaggggcggcagtggcatcag
gtggagatggccgtcagcaccttctggcccagcgagtaccagattgtttttgaagccaca
gtctcatcagagcagaagggttacatcggcctggacgatatagtgctgctaaactacccc
tgctataaagtgcctcatttctccagactcggggatgtggaggtgaacgcaggacagaac
gctacatttcagtgcgtggccaccggacgatccactaggagcgatcccttcctgatggag
aggcgtaacggtgttctgatgtcgccgtacacagtgacatcatccgtaggtgagcgtcga
ttggttgcatggtttcaggtgggcggagctcagcgtggagagcaggatctctaccgatgc
atcactcagtcgacatacggagcagcagtgtccaactttgctgaactaatcgtcagagtc
ccgcccacaccgatagctccgccccagctgctgcgctctggccccacctacctgatcatc
cagctcaacactaactctatagtgggcgacgggccggtgatccgcagagagatcgtgtac
cgggccagccactcgccctggtctgaaacacacggagtcaactcactgacgtataaagtc
tggcacttggagccagatacagaatatcgcatcagtgttctcctcacccggcccggagag
ggtgggaccggtccgcctggacccccgctggtcagcagaaccaagtgtgcggagcccatg
cgtccactcagaggtctgacggcttcagagatccagtcgcgtcagctgctcctgcagtgg
gagccggttggctacaatctgacgcgctgtcacacgtactcgctgtcgctctgctaccgc
tactccaccgccgctgggggcggagccggcgggaataacgccacggtgagggagtgtctg
tcagtggagcggaacacctcacgcttcacgctccgggacctgcctccgttccacgccgtt
cacgtgaggctggcactggccaatcctgagggcaagaaggagagccgagaggtgaccttt
cagacagaggaagatattccaggaggcattgcacctgaatctttaaccttcaccccattg
gatgatatgatctttctgaagtgggaagagcctttggagcccaatggtctgatcacacaa
tatgagatcagctaccagagcatcgagtcttcagatcccagcatcaacgttcctggccca
cggcgcactgtctccaaactaaagaatgagacttatcatatgttctccgggcttcaccct
ggcaccacatacctggtgtctgttcgtgcccgcaccgccaagggctttggccagacggcc
ctaaccgaaatcaccaccaatatctcagcgcctgcgtttgattatgaagacgtccccact
ccactgagtgaatctgagagcaccataacagtcctcctgcgtccagccttggggagagga
gcacctgttagtacctatcacgtggttgtggtagaggaggacggctccagacaggtgagg
cggagggagttgggtcacattgagtgtttccctgctccttcctcccatggggagagtcca
ggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggggcaagtggt
gccccgcctcattactacacagctgaactcacacccagcagcttacccgaggctacacca
ttcaccgtaggggacaaccacacctacaacggctactggaacacacctttggaccccggc
aagaactatctcatctacttccaggcctccagtaacttcagaggggagacgaggatcaac
tgcattcggatcgctcgtaaagaggcctgtaaggaccataagcgagctctggaggtgtcc
cagcatgctgaagacatggggctgatcctgggggcctgtgccggggggctggttgttctc
atcctcctgctgggagccatcgtggttattgtcaagaaaggaagggacatctattcgtac
ccttactacccgaggaagaaggtgaacataaacaaggcagtgatgacgtatcgccaagag
aagacgcgtaagctggggtcactggactgcagtactacagagcacagtacactgcaacag
gacgaccgcacagcgcacaccttcatggactcgcataactgcactgctagaaatgaacag
cgcagcacagtgaatgagtccagcagcctgctgggtggttctcccagaaggctctgcagg
aggaagagttctccgtaccacacagggcagctccacccggctgtgagagtggcagacctg
ctccagcacatcaaccagatgaagacaggagagggctacggcttcaagcaggagtatgag
agttttttcgatggctgggacataaacgaaaagaaggacaagaccaagggccgacaggac
acccttctgggtcaagaccgtcaccgtgtgaaaatgcattctctcctggccgaccctaac
tcagattatgtcaatgcaaactacatcgatattcggataaacagggaacttaatgtgcag
agtcaactgcaacagtggcgtgagtttggagacaacaatggcgagcagtatatattcatc
catgatgccatactagaggcctgtctgtgtggagagaccgccatccccattagcgagttt
gcgctcacctataaggacatgttgagtgtagattctcagaccaacacctctcaactgcga
gaagagtttcagactctaaactctgtgactcctcacctggatgtggaggagtgcagcgtc
tctctactgccccgcaaccgtgagaagaaccggagcatggacgtgctgccgcctgaccgg
gcgctggcgtttctcgtctccaccgagggcgacggcaacaactacataaacgcggcacta
atggacagcttcctgcagccggctgctttcgtggtaacccctcaccctctgcccaccacc
accgccgacttctggagactggtgttcgactacggctgtacctccatcgtcatgctcaac
cagctcaaccagtccaactcagcctggccttgtctgcagtactggcctgaaacaggcatg
cagcagtttggaccgatgacggtagagctgctctccagatccactgacgacaacatcgtc
actcgcctgttcagggtggccaacatcacacggttgcaggaaggtcatctggtagtgcgg
catttccagttcctgcgctggtcggcttatcgtgaaatcccagactctaagaaggccttt
ctcaaccttctggcacaagtgcagaagtggcagagggagtgcggcgacggtcgcactgtg
gtgcactgcctgaatggtgggggacgcagtggcactttctgcacttgcaccatgataatg
gagatggtgcaccatcacaacatggtggacgtgttctacgctgtcaagactctacgcaac
tccaagcccaacatggtggagtctatggatcagtacaggttctgctatgagctggctctg
gagtacctggactgcctggaggtcagataa
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integrated database retrieval system
