Garra rufa (doctor fish): 141289367
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Entry
141289367 CDS
T11039
Symbol
grin2da
Name
(RefSeq) uncharacterized protein grin2da
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
grf
Garra rufa (doctor fish)
Pathway
grf04020
Calcium signaling pathway
grf04080
Neuroactive ligand-receptor interaction
grf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
141289367 (grin2da)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
141289367 (grin2da)
04082 Neuroactive ligand signaling
141289367 (grin2da)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
grf04040
]
141289367 (grin2da)
Ion channels [BR:
grf04040
]
Ligand-gated channels
Glutamate (ionotropic)
141289367 (grin2da)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
BTK
Motif
Other DBs
NCBI-GeneID:
141289367
NCBI-ProteinID:
XP_073677577
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Position
17:31921536..31997232
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AA seq
1885 aa
AA seq
DB search
MAARPALSFLLAVLACTGPAQPSPPLLLRPRERERDSGGASGGVNIAVVHSGSSHLPETS
AGVGGVGESVMTPWGPANVIWLAVNESSPGSLLLQLCELLATTPLQGLVFEEEKPPPPNR
APLAPMLEFVSAQTGVPVIAVGGGAGLGREPQESGSVYLQFLCSTGLQLEVIFEVLEEFD
WTAFSVVYTRHHGYEDFLAMVEGMIDGSFIGWERKSVVMLNLTDDPGGARTRRLLKENEA
QVRLLYCSQEEAEHIFRAAWASGQATPSHMWFAVGPGLSGLGLEGLPKALFAVRPQGWRD
EPRRRIAKGVSVLTHGAMALRREYGGARGTSFAGNCVMDGNQTQRVPDRIRFFSNITLSG
RDYSFNNDGYLANPLLDVISYTPGRGWEEVGWWENGVLRLRYPPWSRYGPFLKPLDDSQH
LRVVTLEERPFVIVEPADPGTGSCIRDSVPCRLPLNNSMVVEGIQSMKHCCKGFCIDVLK
RLAKIVGFTYDLYLVTNGRHGKNIDGEWNGMVGEVVSKRADMAIGSLTINEERSEVVEFS
VPFVETGISVMVSRSNGTVSPSAFLEPYSPAVWVMMFVMCLSVVAVTVFIFEFFSPVGYN
RSLQSGKKAGGSKFTIGKSIWLLWALVFNNSVPVENPRGTTSKIMVLVWAFFAVIFLASY
TANLAAFMIQEEYIDTVSGLSDKKFQHPTEQYPPLRFGTVPNGSTEENIRSNYPNMHQYM
VRNNQRGVEEAIDNLKTGKLDAFIYDAAVLNYMARKDEGCKVMTIGSGKVFATTGYGIAL
HKNSRWKRPLDLALLQLVGDDEIDMLERLWLSGICHNDKIEVMSSKLDIDNMAGVFYMLL
VAMGLSLLVFAWEHLVYWKLRHCLGRSGGLDFLLAFSRGMYSCCNFEDETAPGGSQSTLP
QYHHVSTIPPPPPPHVISTAVANPPIAMAQQQQQQQQQKQHHQQPPVYNALLPGSPPSGV
HSGMALGPSNSPILGAPMPCSTFLPRHDRRLAVVDRWTRPKMGPEKPGGVSSGITDLSQF
QGMPPHWGVGISGGEGGLDEYKRYYGPIDPEGLGVSAEPQNIGTQTPKTKHRGTKPSGNP
RLPPKGQASGHLPINPALQHPSPPQQSMWRRSSFSKRKGSGGPLYENILPLGRRGGGRYG
MRDGGGRRGRRPPPLPLPIPVPLSSPTQTPPSPSPSICYTSTSSSSSSTSSSSSSSESVS
RSNSPSSSSSYTSSQSFRYRADVRDVYEDYDTDELTEESSLLLGRRKSRSRMSSRSLPSS
PPPPPIPPRKPCGQRAQVRDRAGSQIAQLQEWWASWGEKEKNRRAAGDRDVKEEKRHHKE
RERERKRRKKGRKKKKREERERERERKRRKVKKKKKKEEKSRRRERGKRSEQEEVDMDRK
DVFEKGIGQEYSSYPALRRSSFRKKSESSTRSYEWDVIRDGVKRDRDDQGGEDEEGSRGK
ERHQRSPKSQRQSRPRSNNKNFSSSNKPPSTVKFWSSGNPTSDSPSSFVPLLPISKRRKS
VGTERDERGRGGESRPLLGKDKRLKPCSREGLSFHEWDSEEEDEESEVERSRPEEQGRRR
ESRGMDSESERDREKTVEIYTDDEGSSGEFGKFERYWEGHEGRAVGGIGGGGWFFGTYPA
RERGGSINSRDDTFLAWGGGEGSLGFGAGAGWGSGGLGSNQWPPTPLTPPPPRRYWSVDK
LPVKTEKKSKSRSQEKSRAHTSCSCQSPHHSASTHSKWNRVTSRSQEELLPHCHSFSSSV
RPKRQSSKPDRAQSQVKSGSQSNLSAQRPQRSDRSRQPPSPPQSLPPSLPSPMVPALPAP
PSSSHHIHVPPPTSSSSVSSPSVVSSTPGAPQPSSLSSSSAKLQYQKLRSVPQPQRYQSP
HLPLKTKSLCSRRGSAHFSSVESEV
NT seq
5658 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaaggcccgccctttcgttcttattggctgtgctggcgtgcactgggccggcc
cagccctcccccccactgctgctccgcccccgggagagagagagggactctggaggggct
tcgggcggagtcaacatcgctgtggtccactccggctcctcccacctcccggaaacgagc
gccggggtggggggcgtgggtgagagcgtgatgacgccatggggacccgcgaacgtgatc
tggttggccgtcaacgagagcagtcctgggagcctcttgctacagttgtgcgagttactg
gctaccactccgttacaaggtcttgtgtttgaggaagagaagccgccaccgcccaaccgg
gcacctttagcaccaatgctggaatttgtctcggcccagacaggagtgcctgtgattgcc
gtgggaggaggggctggcttgggaagggagccacaggaaagtggctctgtctacttgcag
ttcttgtgctccactggcctgcagctggaggtcatttttgaagttctggaggagtttgat
tggactgctttctctgtggtttacacacgccaccacggctatgaggacttcctggccatg
gtagaaggcatgatagatggctccttcatcggctgggagagaaagagcgtggtgatgctt
aacctgactgatgacccgggaggggctcgcacacgcaggctgctgaaagagaatgaagca
caggtgcgactgctgtattgctcacaggaagaggcggagcacatttttagggctgcatgg
gcatcagggcaggctactccctcacatatgtggttcgcggtgggcccgggtctttctgga
cttggtcttgagggtttacctaaggctctgttcgctgtgcgaccccagggatggagagac
gagccgaggcggcggattgcaaaaggtgtgtcagtactgacgcacggtgctatggcttta
cgtagggagtatggcggggcccgagggacgagcttcgctgggaattgcgtgatggatgga
aatcaaacacagagggtaccagatagaatcaggttcttcagtaacataactctatccgga
cgggactattcctttaataatgacggttatctggcaaatccgctcctggatgttatctcc
tacactccaggaagaggctgggaggaggtaggttggtgggaaaatggagtgctgcgcctg
cgttacccgccctggtcccgctatggcccgttcctcaaacctctggatgactcccagcac
ttgcgtgtggttactctggaggagaggccgttcgtcatcgtagagcctgctgatcctgga
acgggctcctgcatcagagactctgtgccgtgccgtctgccgctcaacaacagcatggtt
gttgagggcattcaatccatgaagcactgctgcaaaggcttctgtattgatgttctcaag
cgcctggctaaaatagtgggcttcacctatgacctctatctggtgaccaatggcaggcat
ggaaagaacatagatggagagtggaatggaatggtcggggaggtggtgtccaagcgggcc
gacatggcgatcggctccctgactattaatgaagagaggtcggaggttgtggagttctct
gttccgtttgtggagactggcatcagtgtcatggtctctcgtagcaatggcacggtgtca
ccatctgctttcctcgagccgtacagcccagctgtgtgggtgatgatgttcgtcatgtgc
ctgtctgtggtagctgtgaccgtcttcatattcgagttcttcagccctgtcggatataac
cgaagcttacagagcgggaagaaggcaggaggttcaaagttcaccatagggaagtctatc
tggctgctgtgggctctggtgtttaataattccgttccggttgaaaacccaagaggcacc
accagtaagataatggtgctggtctgggctttcttcgctgtcatcttcctggccagctac
actgctaacttggctgctttcatgatccaagaagagtacatcgatacagtgtctggcctc
agtgataagaagtttcagcaccccacagagcagtatcctcccttacgcttcggcaccgtt
ccaaacgggagtacggaggaaaatatacggagcaattaccccaacatgcatcagtacatg
gtgcggaacaatcagagaggagtggaagaagccatcgacaaccttaaaactggaaaactg
gatgcattcatatatgatgcagctgtcctaaactacatggctcgtaaggacgaaggctgt
aaagtaatgaccatcggctctggcaaagtattcgctacaacgggatatggcattgcctta
cacaaaaactcacgctggaagcggccgctggacctcgccctcctgcagttagttggagac
gatgagattgacatgcttgaacgactctggctgtctgggatctgccataatgataagatt
gaggtgatgagttccaaactggacatagacaatatggcaggagtcttctatatgcttttg
gttgccatgggcctaagtctgctggtgttcgcatgggagcatcttgtctattggaagctc
cgccattgtttgggccgctctggaggactggacttcctactggcttttagtcggggaatg
tacagctgctgcaattttgaggatgaaacagctcctggaggttcccaaagcacacttcct
cagtatcatcatgtctccacaattcctcctcctccaccgcctcatgtgatctctacagcc
gtggccaatccccccattgctatggcacaacaacaacaacagcagcaacaacaaaagcaa
caccaccagcagccaccggtatacaatgctcttcttcctggctcccctccttcaggtgta
cattctggaatggctctagggccatcaaacagtcccattcttggagcacccatgccttgc
tctacattcctgccacggcatgatcgtcgattagctgtggtggatcggtggacacgtcca
aaaatgggccctgagaagcctggcggtgtgagcagtgggataacggacttatcacaattc
caaggcatgccccctcactggggtgtaggtataagtggaggagaggggggtctggatgag
tacaagagatactatgggccaattgatccagaaggtttaggggtctctgctgaacctcaa
aacataggcacccaaactcccaaaactaaacatcgagggacgaaaccctctggaaacccg
cggttacctcctaaaggtcaagcctctggtcacttaccaattaaccctgctttgcaacat
ccctctccacctcagcaatctatgtggaggagaagcagcttctcaaaaaggaagggctca
ggggggccactctacgaaaacatccttccgctcggaaggagaggtggtggcagatatgga
atgagagatggcggtgggagaagaggacgtcgtcctcctccccttcccctgcctatacct
gtgcccctctcttccccaacacagactccgccctcaccttctccatctatttgctacaca
tccacttcctccagcagctctagcacctccagttcatcctcctcttcagaatcagtctcc
cgatccaattctccttcttcttcatcatcgtacacatcatcacagagctttagataccgg
gcagatgtacgagatgtgtacgaggactacgacacagatgagcttacagaggagtcaagc
ttgcttttgggaaggagaaaaagtcgatcacgaatgtcctctcgatccctgcccagcagt
cctccgccaccacctatacctcctcgcaaaccttgtggacagagggcacaggtgagagac
agagcaggcagccagattgcacagctccaagagtggtgggcctcttggggagagaaagaa
aagaatagaagagcagcaggagatagagatgttaaggaggagaagcggcatcataaagaa
agggaaagagagagaaagcggaggaagaagggtagaaagaaaaagaagagagaagagcgt
gaaagagagagggagcgtaaaagacgtaaggtaaaaaagaaaaagaaaaaagaggagaaa
tcaagaagaagggagaggggaaaacgatctgaacaagaggaggtagatatggacagaaaa
gatgtctttgaaaaaggaataggacaggaatactcttcttatcctgcactgaggcgaagt
tctttccgtaaaaagagtgaaagctctacaaggagttatgagtgggatgttatcagagat
ggagttaagagagatagggatgatcaaggcggagaagatgaagaaggcagtagaggaaag
gaaagacatcagagaagcccaaaatcgcaacgccagtccaggccaaggtccaacaacaag
aatttttctagctcaaacaaacctccttcaaccgtcaaattttggagcagtgggaaccca
acttccgattcgccatcatcttttgtacccttgcttcccatatctaaaagacgaaagtct
gtaggaaccgagagagatgagcgaggaagaggtggagagagtcggccccttttgggaaaa
gacaagagacttaagccttgctcgagagaaggcttgtcatttcacgagtgggattccgag
gaagaagacgaggagtctgaagtggaaagaagtaggccagaagaacaggggcgacggcga
gaaagcagaggaatggactctgaatctgaaagggacagagaaaaaactgttgagatatac
acagatgatgaaggttcctcaggagagtttggtaagtttgagagatactgggagggtcac
gaaggaagggcagttggaggcattggaggaggaggatggttctttggcacctaccctgcc
agagaaagaggaggcagcataaacagtagagatgacacctttttggcgtggggtggtgga
gagggtagcttgggtttcggagcaggagcagggtggggatcaggaggcttaggatcaaac
cagtggcctccaactccattgactcccccacctcctcgaagatactggtctgttgataaa
ttaccagtgaagactgaaaagaaatctaaaagcaggtctcaagagaagagccgagcccac
acatcctgttcctgccagtcgccacatcactctgccagcactcactccaaatggaatcgg
gtgacttctaggagccaggaggagctactcccacactgccacagtttcagcagcagcgta
agacccaaacggcaatcatccaaaccggatcgggctcagagccaggtgaaatctggaagc
cagtccaacctcagtgcacaaagaccacagcgctcagaccggtcccgacaaccaccatcc
cctcctcagagtctcccgccatctttaccctctccaatggtccctgcactcccagcccca
ccctcttcctcacaccatatacatgtacctccacctacctcctcttcgtcagtttcctcc
ccttcggttgtctcatctacacctggcgccccacagccctcctctttgtcctcctctagt
gctaagctccagtaccagaaactgcgatcggttccccaaccccaaaggtatcaatcccca
catcttcccctcaaaaccaagagcctgtgctcccgtcgaggttctgcccacttctccagt
gtggagagtgaggtctga
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