Garra rufa (doctor fish): 141289483
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Entry
141289483 CDS
T11039
Symbol
c1galt1a
Name
(RefSeq) glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
KO
K00731
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase [EC:
2.4.1.122
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00512
Mucin type O-glycan biosynthesis
grf00514
Other types of O-glycan biosynthesis
grf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
141289483 (c1galt1a)
00514 Other types of O-glycan biosynthesis
141289483 (c1galt1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
grf01003
]
141289483 (c1galt1a)
Enzymes [BR:
grf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.122 N-acetylgalactosaminide beta-1,3-galactosyltransferase
141289483 (c1galt1a)
Glycosyltransferases [BR:
grf01003
]
Glycan extension
Type 3 chain
141289483 (c1galt1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Glyco_transf_25
Motif
Other DBs
NCBI-GeneID:
141289483
NCBI-ProteinID:
XP_073677686
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All DBs
Position
17:10602545..10621455
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AA seq
321 aa
AA seq
DB search
MSVYDMRAFKKHILFSSGVAVSFLLSLTYSCILRTLTPSFAMNNGKMSTLQYTVENRRAA
LDLRQKVRVLCWVMTRPQHLMTRTQYVRATWGKRCNIILYMSSEESDFPTIGLNVSEGRS
QLYWKTIRAFQHIHTHHLNDADWFLKADDDTFVVIENLRYSLSKHNTEEPLYFGRRFTPF
VTQGYMSGGAGYVLSKEALRRFVKGFADGLCTHDTENEDIGLGKCMETMKVQMGDSRDVL
GRQTFHPYPPDYYLPRQIPRPRPWYLLYEHYHPVEGPGCCSDLAVSFHYIDAVQMHTLEY
YTYRLRPYGYKYRFNPYKMLR
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgtacgacatgagagcatttaaaaagcacattttgttttcaagtggtgtagca
gtgagttttcttctctcactaacttattcatgtattctaaggactctaacgccttcattt
gctatgaacaacggtaaaatgtcaactctacaatatacagtggagaacagaagagctgcg
ctggatcttaggcagaaggtcagagtgttatgctgggtaatgacaaggccccaacacctg
atgaccagaacccaatatgttcgtgccacatggggaaaacgctgcaacatcattctgtac
atgagctcggaggagtcagatttccccacgatagggctcaacgtatcagaaggacgcagt
cagctctactggaagaccatacgggccttccagcacattcacacgcaccatctgaatgat
gctgattggtttctcaaagctgacgatgacacgtttgttgtcattgagaatctgcgctat
agtctgtccaagcacaacacagaggagccactgtattttggacgcaggttcacaccattc
gtcacacagggctacatgagcggaggagctggttatgtcctcagtaaggaagctttgagg
agattcgtgaaggggtttgctgatggactttgcacacatgacacggaaaatgaggacatt
ggattgggaaaatgcatggagacaatgaaagttcagatgggtgattcaagggatgtgttg
gggagacaaacctttcatccttaccctccagattattacctgccacgacagatacccaga
ccacgaccctggtacctcctctatgagcattaccaccccgttgagggtcctggatgctgt
tcagatttagccgtctctttccactatatagacgcagtgcaaatgcacactttagagtac
tacacctatcgcttacgcccatatggatataaatacagatttaacccatataaaatgctc
agataa
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