Garra rufa (doctor fish): 141289585
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Entry
141289585 CDS
T11039
Symbol
nfatc1
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
grf Garra rufa (doctor fish)
Pathway
grf04010
MAPK signaling pathway
grf04020
Calcium signaling pathway
grf04148
Efferocytosis
grf04218
Cellular senescence
grf04310
Wnt signaling pathway
grf04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
141289585 (nfatc1)
04310 Wnt signaling pathway
141289585 (nfatc1)
04020 Calcium signaling pathway
141289585 (nfatc1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
141289585 (nfatc1)
09143 Cell growth and death
04218 Cellular senescence
141289585 (nfatc1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
141289585 (nfatc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141289585 (nfatc1)
Transcription factors [BR:
grf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
141289585 (nfatc1)
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
141289585
NCBI-ProteinID:
XP_073677826
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Position
17:30606921..30662600
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AA seq
870 aa
AA seq
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MKSAEEDAYGYGQNTSISLPLSNPCPPSQYHNLQTSPSLSISISQPSSFSPQDDMSSVGY
FQTSGTRSNGAPTLESPRIEITAYGQFSEEEVEENSVPVAKRVNSIVTLTLPSVDGYRDP
TCLSPASSVSSRSCHSEASSYESGFSYNYDNSPQNSPWQSPCVSPKGSSSLQSCTLGASP
RHSPSGSPRTSITDDSWMGTRGSRPNSPCAGKRKYSFNGGPSHKYHPYSPNQSPGLSPQT
SPRLSVTEDTWLPNTNQYTNSAIVAAINALTTDGLTDLGEGIPLKSRKTSLEHSASMNLK
VEPGGEETGSLELCQEDFSSARLPFKKETYCSGFLDVPQHPYWSKPKPYISPSLPALDWQ
LPSSSGPYSLQIDVQPKSHHRAHYETEGSRGAVKALAGGHPVVQLHGYMENEPLTLQLFI
GTADDRLLRPHAFYQVHRITGKTVSTPSHEVMQSNTKVLEIPLLPESNMRAIIDCAGILK
LRNSDIELRKGETDIGRKNTRVRMVFRVHINQPNGRTVSLQVASNPIECSQRSAQELPLV
DKQSMESCAASGGEQILLSGHNFQPDSKVVFVERAQDGHHVWEMEAKVNRESSKSVALLV
NIPPYRNQRISNPVQVNFYVCNGKRKRSQYQRFTYLPTNVPTIKTEPHDDYDLPQVCAPL
HPAGLALHPKPYYSPPAMAPMMPSELRPCVTGSFASSPQRLVAKPTSLSCSSSPSTSPKL
QDLSPPHLSTKCLSAGSNLGPQSPTVPHVSTIQPTPGRYPQPILYQTGSAASSPGSHPST
PNSAPELPFTPSHSLTQSQATSEASALAAQITKGPVRSGSSPLLQEEGDSPAMLAVSIKQ
EPQELDQMYLDDVNEIIRNDLSSISVHSHA
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccgcagaggaagatgcgtatggttacggccaaaacaccagcatctcacttcct
ctgagcaacccctgcccaccctcccaataccacaatctccagaccagcccttccttgtcg
atatccatcagtcagccatcctcgttctcccctcaagatgacatgagctcggtgggttac
ttccaaacatctggcacccggtccaacggagctcccacgttggagagtccacgcattgag
ataacagcttacggccagttctctgaggaggaagtagaggagaacagtgtccccgtggcc
aagcgagtcaattccatagtgacattaactttgccaagcgtcgacgggtatcgtgacccc
acctgcctcagcccggcaagcagcgtgtcttcccgtagctgccattcagaagcgtcatcg
tacgaatctggcttctcgtacaactacgacaactcgccgcagaactcgccctggcagtct
ccctgcgtctccccgaaaggttcctcctctctgcagtcttgcacccttggtgcttctcct
cggcattctccgtcaggttctccccgtaccagtatcactgacgacagctggatgggcacc
cgaggctcacgaccaaattctccttgtgccggtaaacggaagtacagtttcaacggaggc
ccgtcgcacaagtaccatccatactccccgaatcaatccccagggctgtcgccacaaact
tcgcctcgtctcagcgtgacggaggacacctggctgcctaacaccaaccagtacaccaac
tccgccatcgtcgccgccattaatgccctcaccacagatggattaacagatctcggggag
gggatccctttgaagtcccgcaagaccagtctggagcacagcgcctcgatgaacctgaaa
gtagaaccaggtggagaggagacaggatccctggagctttgccaggaggacttctcctcc
gcacgcctgcccttcaaaaaagagacctactgcagtggctttttggatgtgccccagcac
ccatattggtccaagccaaagccttacatcagtccatctctgcctgctctcgattggcag
ttgccttccagttcagggccgtacagcctgcagattgatgtccaacccaagtcccatcac
cgtgctcactatgagaccgaaggcagcagaggggctgtaaaagcactggcaggagggcat
ccagtggtccagcttcacggctacatggagaatgagcctctgaccctccagctatttatc
gggacagcagacgaccgtcttctccggcctcacgccttttaccaggtccaccgtatcacc
gggaagaccgtgtccacaccgagccacgaggtcatgcagtccaacaccaaagttcttgag
attcctctactccctgagagcaacatgagggccataatcgactgcgctggaattctcaag
ctgcgtaactcagacatcgagctccggaagggagagacagacatcgggcggaagaacacg
cgtgtgaggatggtcttccgggtccacatcaaccaacccaatggcaggacggtgtcctta
caggtggcatctaaccccattgagtgctcccagcgctcagcacaggagctgcccctcgtg
gataaacagagcatggaaagctgtgccgcctcagggggggaacagattcttctcagcggg
cacaacttccagcccgactccaaggtggtgtttgtggagcgagcacaagatggccatcac
gtatgggaaatggaagccaaagtcaacagagaatcatccaaatctgtggctttgcttgtg
aacatcccgccataccggaaccaaagaatatccaatccagttcaagtgaatttctatgtg
tgcaatggcaagcggaagagaagccagtaccagcgtttcacatacctgcccacaaacgtt
ccaaccataaaaacagagccgcatgacgactacgacctcccccaggtatgtgcaccgctc
catcccgccgggttggcgctgcatccgaagccctactacagccccccggcgatggctcct
atgatgccctcagaactaaggccttgtgtcacgggctccttcgcatcgagccctcagaga
ctggtggcaaagcccacatccctgtcatgctcgtcctcccccagcaccagccccaaacta
caggatctttccccgcctcacctctccactaagtgcctatcagcgggttcgaacctgggc
ccccagtctcctacagtcccacacgtctctaccatccagcccacgcccggacgctacccg
cagcccatcctctaccagacaggaagcgccgcatcctctccagggtcccatccttccacc
ccgaactctgcaccagaactccccttcactcccagccacagtctgacccagtcgcaggcc
accagcgaggcctctgcgttagcagctcagataaccaaaggaccggtgaggagtgggtcc
tcccccctcctacaggaggagggagactcccccgccatgctggctgtcagcatcaagcag
gaaccacaggaactggatcaaatgtacctagatgatgttaacgaaatcatcaggaacgat
ctctccagcatctccgttcacagccacgcatag
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