Garra rufa (doctor fish): 141289779
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Entry
141289779 CDS
T11039
Symbol
pou2f2a
Name
(RefSeq) POU domain, class 2, transcription factor 2
KO
K09364
POU domain transcription factor, class 2
Organism
grf Garra rufa (doctor fish)
Pathway
grf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
141289779 (pou2f2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141289779 (pou2f2a)
03021 Transcription machinery [BR:
grf03021
]
141289779 (pou2f2a)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
141289779 (pou2f2a)
Transcription machinery [BR:
grf03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
141289779 (pou2f2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Motif
Other DBs
NCBI-GeneID:
141289779
NCBI-ProteinID:
XP_073678063
LinkDB
All DBs
Position
17:complement(38154208..38221911)
Genome browser
AA seq
697 aa
AA seq
DB search
MFVPLPVPLVFQRTAPDFSAWRLKSPLPLRSGNSVDIRMSKAVEDDKMGTELPVDSTDSE
RNSPEASDQTQPMKTSPFCLSPAPSNTKVKAEEAVEMTSVHAPPPPPAQPSLPHTQLMLA
GSQLAGLAALLPAQQQLLLQQAQAQLLAAAVQQSNAAHAAHAAAAANQQQQQTQQQQANQ
AAAQAQSQAKADQAPPPLLSQPIQLTAQDIQQLLQLQQLVLMPGHHLQSPAQFLLPQAQA
QQGQQGLLSTPNLISLPQQSPGSLLTTPPRLGLQAQHHLDDRLWSFQREKSMESIVSSAP
SSAPPMSSIPTATAHAEEPSDLEELEQFARTFKQRRIKLGFTQGDVGMAMGKLYGNDFSQ
TTISRFEALNLSFKNMCKLKPLLEKWLSDAETMAIDNMLPSPSSLSSPLLGFEGLPGRRR
KKRTSIETNVRIALERNFISNQKPTSEEILLMAEQLNMEKEVIRVWFCNRRQKEKRINPS
SATPPLPNQPPAPTHKPPCYSPHMMSGTQGLAQVATSLSTTAVSPTPSVACPLNPSGHSA
LSSAPSSVTPPPLSTVSPTPPSLSSPGLNTGNSMMGVSTGMNQALLSSNPLATMQALAAS
GGQMPISALESSGQMFLGGAGGPGAGFRQSLFLNRPTLLPLARSAGMGLMGTPRASPPPG
ASGTSPDSCSVSPCSSPASFCSLGDASPPHLGGAMAE
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcccttgccggtgccgttggtgtttcagagaaccgctcctgatttcagcgcc
tggcgactcaagtctccgctgcctctgcgctccggtaactccgtagatatcaggatgtct
aaagccgttgaggatgacaagatggggactgagcttccagtggacagtacagactctgag
aggaacagtccagaggccagcgatcagacccagccaatgaaaacaagtcctttctgcctg
tctcctgcacccagcaacacaaaggttaaagccgaggaggccgttgagatgaccagtgtt
cacgctcctccacctcctccagctcagccgtctctgccacacacacaactcatgctggca
ggcagtcagctcgcagggctggctgctctcctccctgcacagcagcagctgttgttgcag
caggctcaagcgcagctgttagccgcagccgtgcagcagtcgaacgccgcgcatgccgcc
cacgctgccgccgcagccaatcagcagcagcagcagacgcaacagcagcaggccaatcag
gcagcagcacaagcccagtctcaagccaaagctgatcaagctccgcctccacttctgtca
cagcctatccagctcactgcccaggacattcagcagttgttgcagttacagcagctggtc
ctgatgcccggtcatcatctacagtctcctgctcagttcctgctgcctcaagcccaggct
cagcagggtcagcaaggtttgctttccacaccaaatttgatttcactacctcagcaaagc
ccagggagtctcctgaccaccccacccagactgggccttcaagcacagcatcatcttgac
gacaggctgtggtcatttcagagggagaagagcatggagagcattgtgagctccgccccc
tcatcagccccaccaatgagctccattcccacagcgacagctcacgccgaggagcccagt
gatctggaggagctcgaacagttcgccagaaccttcaaacagaggagaattaaactgggt
ttcacacagggggatgtgggtatggccatgggaaaactatacggcaatgacttcagtcag
accaccatctcacgtttcgaggctctcaacctcagtttcaagaacatgtgcaagctcaaa
cccttgctggagaaatggctgagcgatgcagaaaccatggcgatagacaacatgctgccg
agccccagttcgctgtcctctcctctgctgggcttcgaaggcctgcctggacgccgccga
aagaaacgcaccagcatcgagacaaacgtccgcatcgccctggagcgcaacttcatctcg
aaccagaagcctacctctgaagaaatcctgctgatggccgagcagctcaacatggagaaa
gaggtcatccgagtctggttctgcaaccggcggcagaaagagaagcgtataaaccccagc
agcgccacccctcctctgcccaaccagcctccagcgccgacgcacaagccgccctgctac
agcccgcacatgatgtcaggaactcagggactggctcaggtcgctaccagtctcagcaca
acagctgtcagtcccacaccttctgtggcctgccctctcaaccccagtggacattcagca
ctgagctccgccccttcctccgtgactccgcctcctctcagcacagtcagccccactcca
cccagtctcagcagccctggcctgaacacagggaactcaatgatgggtgtaagcacagga
atgaaccaggccctcctcagcagcaaccctctggccacaatgcaagccctggctgccagt
ggtgggcagatgcccatttccgctcttgagagcagcggtcaaatgttcctgggtggagct
ggaggtccaggagctggatttcgccagtcccttttcctaaaccgccccactttactgccc
ctggcgaggagcgcaggcatgggcctgatgggcacccccagggcttctccgcctcctggc
gccagcggcacaagcccagactcctgctccgtctccccctgctcaagccccgcctccttc
tgctcgttaggtgacgcctcgccaccccatctgggcggagccatggccgagtga
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