Garra rufa (doctor fish): 141289838
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Entry
141289838 CDS
T11039
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
grf Garra rufa (doctor fish)
Pathway
grf03013
Nucleocytoplasmic transport
grf03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141289838 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
141289838 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grf03019
]
141289838 (nup153)
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
141289838 (nup153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
141289838
NCBI-ProteinID:
XP_073678132
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All DBs
Position
17:complement(26987410..27011878)
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AA seq
1453 aa
AA seq
DB search
MAATGGGKIRSRRYHIASKPYAKGKQQPGLISRVTDTVKSIVPSWLQKYFKNGEVPEGDT
SAVGVDRNNVAPPPNGNDEVTPLPDGRDSPEPSTSNTEPSTSRASLNFQEALSRPPLNRT
HLHFSTLDGSPALGGASSLFSQPSTSTAPFSGSPFAVTSNFSLVKEIKDSSSQHEDDNIS
TTSGFSSRASDKDVPTSKTVPLLWSPETDRTHSGSQTAHSGLKKPAFNLSVFGTSSSSVL
NSSVLNSSQLGDSPFYPGKTTYGGAAALRSARSRPATPYQPPVRRQIKAKPAGAQPCGVT
SATARRILQSLERMSSPLADAKRIPSTVSSPLSASLNHTDLDISSFQSKRKRLEPSVPPV
QKLVVPAAAAVSGNRSISFRPSLTPGGVNRGVEKNNRETPVRQSPPVSDPAQAPSASTSS
LSYPLSSTPSTSSAGSGGGKMKRERAIRPSSKRPDDEVAEEPDLPPASLPSNFTLPTFSF
SSPPPTSSLTSRTTPLTTVSEEPAANKEPAAPSTPPSVPFTFSSPIVKATAASPPSFSPS
SGFTFSAPTMKTGPSYSNGKIVPTVAPVKSVASEEKEFEGPFKPAKVLKQGSVLDILKGP
GFASPSQNSVDKPLLSTSTSSAPLSGFGDKFRPPAGSWNCGTCLLQNKSSDKKCVACLAP
QPNTDSASKLDSKPTEAPASISSLFAPPPGSWDCDTCLVRNKPDVVKCVACDTAKPGTGV
KSRLTLPALSEASSTLSATSSTSTTTTTSASSATGLLGFGDKFKKPEGSWDCDVCMVQNK
AQDVKCVACQSSKPGAVATAVSTPASAPASTAAPLLGFGDKFKKPEGSWECEVCCVQNKA
EDQKCLACQSAKPGAKIESKGFSSSFGVQSNSTDSSSSGFKFGTGSMDSTSAGLKFGGTF
SDTTSTTGGFKFGFGSSDSTSKSEGFKFGGLTSDAGSGVAKLGSTSSESTSTKESVSKGF
TFGGSVDDSLDKKTKSQDSSAGFKFGNGGGITFSSQASSSENSAFLFGAKPSENGSSNSS
FGFSVPQPKAEKDDAPATSETVLTTTTSTAATVIPIFGKSLVAESSAPKFGEPSTKEQTL
VTSTFTFGKTEEKKDTSAPSGAFLFGASKEADKPAPTLGFSFGEPDPPKDFPKPTLTFGK
PAESAEPPKPSFSFGQSMTDTSAPKPSFGFMANSSSTPASSSSTPSLFGTPTTSSLAPTP
APSSTFVFGQSSSSEHTMAKTFVFGQQPQDSQPAPPAAPSAASAPAQPFQFGSGTNSSSP
AFTFSGAASSTPASAAPAPPANPSPFVFSSATPSSGFGSGQAPIFGQSASQPSAPAFGSA
APSFSSTASPASAFGAKPNSGSVFGQQANPAPSFGSAASTTGQGGFQFGGTGGFGASGSN
NSVFAFGAGSAAPATPAASPAMPALNPPSSGGFGFGQPPAFNIGAGKSSFNATPSTPNSI
AGRKIKTAVRRRK
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacaggaggagggaaaatcagatcaagaagataccacatcgcttcaaaacct
tatgccaaaggcaaacagcagcctggcctgatcagtcgagtgacagatacagtgaagagc
atagtcccctcctggctgcagaaatactttaaaaatggagaagttccggagggggatacc
agtgcagtcggggtggaccggaacaacgtggctcctccccccaatggcaacgacgaagtc
acccctcttccagatggacgagactctcctgagccgagcacaagtaacacagaaccatct
acaagcagagcatcgctgaacttccaggaagctctgtcgagacccccgctcaatcggacc
cacctgcacttctccaccctggatggctcccctgcattaggcggtgcaagctccctcttc
tcccagccctccacatccacagcacccttctcagggagcccttttgctgtaacctccaac
ttctccttggtgaaagagattaaggactccagctctcagcatgaggatgacaacatctca
actaccagtggcttctcgtcacgtgcatctgataaagatgtgcccacgtcaaagactgtg
ccgctcctctggtccccagagacggatcgcacccactctggttcacagacagcccactct
gggcttaagaaaccagccttcaacctgtcagtctttggcacttcttcatcatcagtgtta
aacagttcagtgctgaactctagccagttgggggattcgcccttctacccagggaagact
acatatggaggagctgctgcattgaggagtgctcgttcacgcccggctacaccttaccag
cctcccgttaggagacagataaaggcgaagccagctggagctcaaccctgtggagtgacc
agtgccacagcgagacgcatcctacagtcgctggagcgcatgtccagtcctcttgctgat
gcaaaaagaattccatctacagtttcatcacctctgtcagcttcactgaatcacacagac
cttgacatttcaagtttccagtcaaagaggaaaaggctggagccatcagtccctcctgtg
cagaagctggtggtccctgcagctgctgcagtgtctggtaaccgctcgatatcctttaga
ccgtcactcaccccaggtggggtgaacagaggagtggagaaaaacaacagggagactcct
gtaagacaatcccctcccgtttcagatcctgcccaggctccctctgccagcacaagcagt
ttgtcctaccccttgtctagcaccccatcgaccagcagcgctggttcaggagggggaaaa
atgaagagagaaagggccattagaccttcatccaaaagacctgacgatgaggttgccgag
gaaccagacctgccgcctgcctctcttcccagcaatttcactttgccaacatttagtttc
tcttctcctccccccacctcttcactcacctccagaacaacaccactcacaactgtctct
gaggaaccggcagcaaataaggagccagctgcaccatccacaccaccatctgtccccttc
acgttctcttcgcctatcgtcaaggcaacagctgccagtcctccatctttttctccatca
tctggattcacctttagtgcgcctactatgaaaacgggcccttcttactccaatgggaaa
attgttcccacagtagcaccagtcaaatcagtggccagtgaagaaaaggagtttgaagga
cccttcaaacctgctaaggtcttaaaacagggcagtgttttggatatacttaagggacct
ggatttgcgtccccttctcagaactcagttgataaacctttgctgtctacatcaacatcc
tcagcacctctttctggttttggtgataagtttaggcctcctgcaggctcatggaactgt
ggcacttgcctattgcaaaacaagtcctcggacaaaaagtgtgtggcatgtctcgcacca
caacccaacacagactctgcctctaaattggacagtaaacccacagaagctcctgcaagt
atcagttccctctttgctcctccacctggtagctgggactgcgacacatgtttggtcagg
aacaaaccagacgtagttaaatgtgtagcttgtgacacagccaaacctgggactggagtg
aaatctagactgactctaccagctctttctgaggcctcatccaccctctctgccacctct
tcaacatctaccaccacaacaacatccgcttcttcagcaactggactgttaggatttggg
gacaaatttaagaagccagaagggtcttgggattgtgatgtatgcatggttcaaaacaag
gcacaggatgtgaaatgtgtagcctgtcaaagctctaaaccaggagctgtagccacagcg
gtctcaactccagcctctgcacctgcaagcactgctgcgcctttgttaggatttggggac
aagttcaagaaacctgaggggagctgggagtgtgaggtgtgctgtgttcagaataaggca
gaggaccagaagtgtttggcctgccagtcagcaaaaccaggagctaaaatagagtccaaa
ggttttagttcatcttttggcgttcagtccaacagtacagactcaagctcatctggtttt
aagtttggcaccggctctatggactccacctctgctggactaaagtttggaggcactttc
tcagatactacttccaccacaggaggttttaaatttggatttgggtcctccgactcaacc
tcaaaatcagagggcttcaaatttggaggcttaacctcggatgcaggttctggtgtggcc
aaacttggtagcacctcgtcagaatccacatcaacaaaagagagtgtatcaaagggtttt
acatttggtggatccgtggatgactctcttgataaaaagacaaaatctcaggattctagt
gcaggatttaaatttggtaatggtggtggaatcactttcagctctcaagcgtccagctct
gaaaactctgcatttttgtttggagctaaacccagtgagaatggaagctcaaattcatct
tttggtttttctgtgccccagcccaaagctgagaaagatgatgctcctgctacttcagaa
accgttttgaccaccacaacgtcaacggcggcgactgtcattcctatttttggcaagtct
ttagtagccgaatcttctgcaccgaagttcggagaaccatcaactaaagagcaaactcta
gtgacgtccaccttcacctttggaaaaacggaagagaaaaaggacacctccgcaccctcc
ggtgcgttcttattcggtgcttccaaggaagctgacaaaccggcaccaaccttgggcttc
tctttcggcgagccggaccctccaaaagattttcccaagcctacgcttacgtttgggaaa
cctgcagagtcggcagaacctccaaagccatcatttagttttggacagagcatgactgac
acatctgctccaaagccctcttttggcttcatggccaactcctcaagcaccccagcttcc
tccagctccacccccagccttttcggcactcccactacctcttccctggctcccacacct
gctccctcgagtacctttgtatttggccagagtagctcctctgaacataccatggcaaag
actttcgtgtttggacagcagccgcaggacagccagccggcacctcctgcagcaccttct
gctgcatctgccccagcccaacctttccagtttggctcaggcacaaactcatcctcccct
gcttttacttttagtggtgctgcgtcgtccaccccagcctctgccgctccagctccacct
gccaacccttccccatttgtcttcagttctgccacaccttcatctggctttggctctgga
caggcccccatcttcggacaaagcgcgtctcaacccagtgctcctgcatttgggtcagca
gcaccttcattctcttcgaccgcttcgccagcttcggcattcggagccaagcccaattct
ggctctgtattcggacagcaggccaaccctgcaccttcgtttggatctgctgcttccacc
acaggccaaggaggcttccagtttggaggcactggtggatttggagcatcagggagcaac
aatagtgtgtttgcctttggggccggatcagcagctccagcgactcctgcagccagtcct
gcaatgcctgctttaaatcctccctctagtggaggctttggctttggtcagccccctgct
tttaacattggggcaggaaagagttctttcaacgcaacaccatctacgccgaactcaatc
gctggacgcaaaatcaaaactgctgttcgacgcaggaagtaa
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integrated database retrieval system
