Garra rufa (doctor fish): 141289936
Help
Entry
141289936 CDS
T11039
Symbol
matn1
Name
(RefSeq) cartilage matrix protein
KO
K19467
matrilin
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
grf04990
]
141289936 (matn1)
Domain-containing proteins not elsewhere classified [BR:
grf04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
141289936 (matn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Matrilin_ccoil
VWA_3
FXa_inhibition
cEGF
EGF_CA
EGF_3
EGF
EGF_LRP2
Copine
hEGF
Plasmod_Pvs28
BRISC_FAM175B_helical
UPF0449
Motif
Other DBs
NCBI-GeneID:
141289936
NCBI-ProteinID:
XP_073678235
LinkDB
All DBs
Position
17:25352708..25361056
Genome browser
AA seq
489 aa
AA seq
DB search
MALLGFVMLLCILGAQATMDLRNAAAMAAGLCSTKPTDVVFIIDSSRSVRPSEFEQVKVF
MAKVIDGLNIGSDATRVGVVNYASRVKNEVSLKSHKTKAALVKAVSKIEPLSTGTMTGLA
IQFAMNAAFSEAEGARKSPGINKVAIIVTDGRPQDNIRDIAARAREAGIEIFAIGVGRVD
MTTLRQMASEPLEDHVDYVESYSLIEKLTKKFQEAFCAVVSDLCATGDHDCEHICISTPG
SFKCACREGFTLQGDGRSCKACSNAATDVVFVIDGSKSVRPENFELVKKWINQIIDKLDV
SETNTHVGLVQYSSTVKQEFPLGRYNNKKALKDAVKKMDYMERGTMTGQAIGFLVDNSFS
PNQGARPGVDKVGIVFTDGRSQDYIGDAARKAKDNGFKMYAVGVGNAVEDELREIASEPV
ADHYFYTADFKTMNQIAKKLQINVCQEEDPCECNSVVKFQKKVEEALQALTKKLEAVTKR
IAALENKIV
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcattgctggggtttgtgatgctgctatgcatcctgggagctcaagccaccatggat
ctgagaaatgctgctgctatggctgcaggcttgtgtagcaccaaacccactgatgtggtg
ttcatcatcgatagctctcgaagcgtccgtccctctgagtttgagcaggtcaaggtcttc
atggccaaagtaattgacggtttgaacattgggtctgatgctactcgcgtgggcgtcgta
aactacgccagtcgggtgaagaacgaggtctctctgaagtcccacaaaaccaaggccgcg
ctggtcaaggccgtgtccaagattgagccactgtccaccggtacgatgaccggcctcgcc
atccagtttgccatgaacgcggccttcagcgaagcagagggagcacgtaaatcccctggc
atcaacaaggtggccattattgtgactgacggcagaccgcaggataacatccgtgacatt
gcagcaagagcacgggaggccggcattgagatattcgccattggagtgggtcgtgtggac
atgaccacgctcagacagatggccagcgagcctctcgaggatcacgtggactacgtggag
agctacagcctcattgagaagctcaccaagaagttccaggaggccttctgtgcggttgtg
tcggacctatgcgcgacaggcgatcatgactgtgagcacatttgcatcagcacacccgga
tctttcaagtgtgcctgcagagagggatttacactccagggcgacggccgatcttgcaag
gcttgcagtaatgcagccacagacgtggtctttgtgatcgacggctccaagagtgtgaga
ccagagaacttcgaactggtcaagaaatggatcaatcagatcattgacaaactggatgtg
tccgagacaaacactcatgtgggactggtgcagtattccagcactgtgaaacaggagttc
cctctgggacgctacaacaacaaaaaggctctgaaagatgcagtgaaaaagatggattac
atggagaggggaaccatgactggccaggccatcggtttcttggtggacaacagcttcagt
cctaaccagggtgccagacccggagtggacaaggtcggtattgtcttcaccgatggcagg
tcacaagactacatcggagacgccgccaggaaggccaaggacaatggctttaagatgtat
gctgtgggtgttggcaatgctgttgaggacgagctgagagaaattgcctccgaacctgtc
gctgaccattacttctacacggctgacttcaaaaccatgaaccaaattgctaagaagctg
caaatcaatgtttgtcaagaggaagatccctgtgaatgtaattccgttgtcaagttccag
aaaaaagtggaggaggcactacaggcattaacaaagaaattggaagctgtgacgaaaaga
atcgctgccctggagaacaagattgtttga
DBGET
integrated database retrieval system
