Garra rufa (doctor fish): 141289951
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Entry
141289951 CDS
T11039
Symbol
rnf115b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141289951 (rnf115b)
04121 Ubiquitin system [BR:
grf04121
]
141289951 (rnf115b)
Enzymes [BR:
grf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141289951 (rnf115b)
Membrane trafficking [BR:
grf04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
141289951 (rnf115b)
Ubiquitin system [BR:
grf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
141289951 (rnf115b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
Zn_ribbon_19
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
C1_2
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
141289951
NCBI-ProteinID:
XP_073678246
LinkDB
All DBs
Position
17:complement(32618609..32632461)
Genome browser
AA seq
311 aa
AA seq
DB search
MAEAAAAAPRHRFFCHCCKGEIDPKLPEYVCPRCESGFIEEVSENSSLLQSRDGAVAGSA
AVGGDDMASQFAELWQLLFMEHSALLSDPTVTDALRRRSGVEAAVGDPASGTVGPVASVE
TLSDCTEPALIPQQNSQQRNSRLDQGQAMEGIVQQFLAGLFSNSDSAGSQTSSWSNMLHS
NPGDYAWGQGGLDVVITQLLAQSENTGPPPAEKGMISSLPTVSISSEQAACRLECPVCRE
EYSEGESVRQLPCLHCFHSNCIVPWLQLHDTCPVCRKSLDGEDRGFQPQTGPPGAISSQT
NVEERSTFETL
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggccgctgctgctgctccacgacaccggttcttctgtcattgctgtaaaggt
gaaatcgacccaaagctgcctgaatatgtttgtcccagatgtgaatctggtttcattgaa
gaggtgtcagaaaactcaagtcttcttcagagtcgtgatggcgctgttgctggttctgcc
gctgtaggtggtgatgacatggcctcacagtttgcagagctgtggcagctgctcttcatg
gaacattcagctctcctctccgaccccaccgtcacagacgcactccgcaggcgttcaggg
gtcgaggcagcagttggtgaccctgcctctgggacagtgggacctgtagcgtctgtggag
acgttgtcagactgcacagagcctgcgctcatccctcaacaaaacagccagcagcgaaac
tctagactggatcaggggcaggctatggaggggattgtccagcagttcctggctggtctg
ttttccaattctgacagtgctggttctcaaacatcttcatggtctaacatgctgcactca
aaccctggagattacgcttggggacaaggcggtttggatgtggtcatcacacagttgctt
gctcagtctgaaaataccggtcctcctcctgctgaaaaggggatgatctcatctctcccc
accgttagcatctcctcagaacaggctgcatgccggctggaatgccctgtgtgtagagaa
gagtactctgaaggggaatctgtccgacagttgccctgtctgcactgctttcacagcaac
tgtatcgtgccttggctacaactgcacgacacctgccctgtctgccggaaaagtctggat
ggtgaagaccggggtttccagccacagacaggacctccaggtgcaatttcatcacagacg
aatgtagaggaacgtagcacctttgagactctttag
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