Garra rufa (doctor fish): 141290050
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Entry
141290050 CDS
T11039
Symbol
lrp12
Name
(RefSeq) low-density lipoprotein receptor-related protein 12
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141290050 (lrp12)
Membrane trafficking [BR:
grf04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
141290050 (lrp12)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CUB
Ldl_recept_a
Motif
Other DBs
NCBI-GeneID:
141290050
NCBI-ProteinID:
XP_073678348
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Position
17:complement(14486204..14508180)
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AA seq
877 aa
AA seq
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MAYTSSLNQNCLLWTHLLFIFMGNAVSSQHSENVYVSGISNACGDVAEQIRASSGVITSP
GWPFEYPSRINCSWNIRANPGEIITISFQEFEIQSSHRCGLDWISIGTYKNLDGYRACGS
SIPAPYISSQDHVWIKFHSDDSMTGKGFRLSYITGKSEEASCKPDQFHCANGKCIPESWK
CNTMDECGDNSDEELCVQPNPSAFFSFQPCAFNQFPCLSRYTRVYTCLPESLKCDGSIDC
QDLGDEIDCDVPTCGEWLHNFYGTFSSPNYPDFYPPGSNCTWLIDTGDHRKVILRFMDFK
LDGTGYGDYVKVYDGLEENPRRLLRVLTAFETRAPVAVVSSSGQLRIHFYADKINAARGF
NVTYQVDGFCLPWEIPCGGNWGCYTEQQRCDGYWHCPNGRDELNCSNCQEDEFPCSRNGA
CYPRSDRCNYQNRCPNGSDEKNCFFCQPGNFHCKNNRCVFESWVCDAQDDCGDGSDEESC
PVIVPTRVITAAVIGSLICGLLLVIALGCTCKLYSLRMFERRSFETQLSRVEAELLRREA
PPSYGQLIAQGLIPPVEDFPVCSGNQTSVLENLRLAVRSQLGFTSIRLPTTGRHGNIWRR
LFNFTRSRRSGSLALVSADTEEGPDGSASAREPERLGSHRGLLPLDSDDTDTESEQHPRR
DVPGAVGGLMAPLPQKTPPATAVEAIVSVSASSAPLVSRESSISESISEGSGVTGSSCAT
TTTTTSTTSRSPFSSALSRVTRSLRWIRFSLGRSGDGSSNSIGQNHSPLRQLEQGSAGCT
GVGIRGDDEDDVELLIPVSDAGSLDSDESSRPLLEQGLEQAFGPHLTPTAVSLRGRLVGR
DGPCEHCGIVHTARIPDACLEATAKTETSDDESLLLC
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggcctacacgtcgagtttaaaccaaaactgtttgctatggacacatctactcttcatt
ttcatgggaaatgcagtttcgtcgcagcacagcgagaacgtgtatgtatcaggcatatca
aatgcctgtggagatgtagcggagcagataagggcatctagtggagtgataaccagccct
ggctggccctttgaatacccttctcgcatcaactgcagctggaacatcagggccaaccct
ggagagatcatcaccatcagttttcaggaatttgaaattcagagctcgcaccgatgtggt
ttggactggatctccattggaacctacaagaacctggatgggtaccgggcctgtggttcg
tctattccagccccatacatctcctctcaggatcacgtgtggatcaagttccactctgat
gacagcatgactggaaaaggctttaggctctcttacataacagggaaatctgaagaagcc
agctgcaagcctgaccaattccactgcgctaatggaaagtgtatcccagagtcatggaag
tgcaacaccatggatgaatgtggcgataactcggacgaggagctgtgtgtacagcctaac
ccctcagctttcttctccttccagccttgcgccttcaaccagttcccttgcctctcgcgc
tacacccgtgtttacacctgcctgccggagtcgctcaaatgcgacggcagcattgactgt
caggacttgggtgacgaaatcgactgtgacgtacctacctgtggcgaatggctgcacaat
ttctacggtactttcagctcgcccaactatcctgacttctatccgcccggaagtaactgc
acctggctgatcgacactggtgaccatcgtaaagttatcctgcgctttatggacttcaag
ctggatgggacaggctatggcgattatgttaaagtctacgatggattagaggaaaaccct
aggcgtctgttgcgagtgttgacggcgttcgagactcgagctcctgtagcggtggtgtca
tcttcaggacagcttcggatacacttttacgctgacaaaatcaatgcagctcgagggttt
aacgttacgtatcaagtggacgggttctgcctgccgtgggaaatcccgtgcggcgggaac
tggggttgctacactgaacaacagcgatgtgacggctactggcactgtcccaatggcagg
gacgagctcaattgcagcaactgccaggaagacgagttcccatgctcgcgaaacggtgcc
tgctacccacgctctgaccggtgcaactaccagaaccgctgcccgaacggctctgatgag
aagaactgctttttctgccaacctggaaactttcactgcaagaacaaccgctgtgttttt
gaaagctgggtgtgtgacgcgcaagacgactgcggggatggcagcgacgaggagagctgc
ccggtaatcgtacccacaagagtcatcactgccgctgtaattgggagtctgatctgcggc
ctgctgctggtcattgctttgggctgcacatgcaagctttactcgctcaggatgtttgag
cgcaggtcatttgagactcagctgtctagagtggaagccgagttactgagaagagaagct
cctccatcgtatgggcagctcattgctcaaggactgattcctcccgtggaagattttcct
gtttgctctggaaaccagacatccgttttagaaaacctacgactggcagttcgctctcag
ctggggttcacctcaatccgactccccaccacaggccggcacggcaacatctggagacgc
ctgttcaacttcacacgctcgcggcgctccggttctctcgcgctggtgtccgccgacacc
gaagagggtcccgacggcagcgcctcggcacgtgaaccggagaggctcggctctcaccgc
ggactcctgcccttggactccgacgatacggacactgagagcgagcagcatcctcgcaga
gatgtccccggagccgtcggaggcctgatggcaccactgccacagaaaactcccccagcg
acagccgtggaagccatcgtctcggtctctgccagctcagctccgctggtcagccgggag
agcagcatctctgagagcatctcagaaggttctggagtaactggatcctcgtgtgctact
actactactactacgtctactacttcaaggagccccttcagcagcgctctaagccgggtc
actcgtagcctacgctggattcggttctctctagggcgctccggagatggaagctcaaac
agcattggccagaatcacagccctctccgtcaactggagcaaggaagcgcgggttgcact
ggtgttggcattagaggcgatgatgaggacgacgtcgaactcctcattcccgtctcagac
gccggctccctggacagtgatgagagctccaggccacttctggaacaaggtctggagcaa
gccttcgggccccacctgacccccactgctgtctctctcagaggccggctggtgggtaga
gacggcccttgcgaacactgtggaattgtccatacggcgcggatcccggacgcttgtctg
gaggcgacggcgaaaacagaaactagcgatgacgagtcgctcctgctctgttaa
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