Garra rufa (doctor fish): 141290235
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Entry
141290235 CDS
T11039
Symbol
vars2
Name
(RefSeq) LOW QUALITY PROTEIN: valine--tRNA ligase, mitochondrial
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
141290235 (vars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
grf01007
]
141290235 (vars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
grf03016
]
141290235 (vars2)
Enzymes [BR:
grf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
141290235 (vars2)
Amino acid related enzymes [BR:
grf01007
]
Aminoacyl-tRNA synthetase
Class I (U)
141290235 (vars2)
Transfer RNA biogenesis [BR:
grf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
141290235 (vars2)
Prokaryotic type
141290235 (vars2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1_2
tRNA-synt_1g
Motif
Other DBs
NCBI-GeneID:
141290235
NCBI-ProteinID:
XP_073678530
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All DBs
Position
17:8930119..8967754
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AA seq
912 aa
AA seq
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MWMAVHVASPRIWSRDLQKAWSRWGCRLCSQSSSSSQPSHHPRTQAEKAKRRQARAKAIL
TSDVNDPGLSWSDKEKIMYTAALVPGEKKDSTLPFPQSYSPEYVEFGWYQWWEKQGFFSP
EQHVRVTVYIHQSIKGFPHDWSKENRDFPSSLSYYGNPDKMFAKLLLERCKGQVNILSVV
ERKLMKEQGKSRQDYSREEFLKQVWRWKNEKGDEIYHQLRKLGASLDWSRACFTMDPGFS
SAVTEAFVRLCDSGLIYRSEGLVNWSCALESAISDIEVDSKELSGRTLLPVPGYQQKVEF
GIMVTFAYPLEGQEGEVTVSTTRPETMLGDVAIAVHPDDARYKALHGKHCKHPFTEHLLP
IVTDSMVDMTFGTGAVKVTPAHDHTDFLLSQRHSLPRLTVIGGDGNMTSDCGQWLEGVKR
FDARERVITALMERKLFRGKKDHPMSLPICSRSGDVIEPLLKKQWFVRCQEMGRKAVEAV
EEGELQIIPHFYTKMWKSWLSNISDWCISRQLWWGHQIPAYRVTLQNSKDTEEEQWVWGR
NAAEARQRAAVKFGVNPDAITLTQDPDVLDTWFSSGLFPFAMLGWPQQTEDLKQFYPNSI
LETGSDLIFFWVARMVMLGRELTGQLPFKQVLFHSLVRDKYGRKMSKSLGNVIDPLDVIS
GVSLERLQEKVKEGNLDPRESIVAMEAQKKDFPKGIPECGTDALRFALCSYKAQGEDISL
SVSHVLSCRHFCNKMWQTVRFTLAALHDASLPSSLAETHPLSSMDKWICSRLYRTVQQCE
RGFESYELHMVTSALHSFWLHSLCDVYLESIKPVLKGEGSGSEEQRVRERQVATSVLFHS
VSISLALLSPLMPFLTEELWQRLLPYADSDXTSSSLCVQPYPKTSQLIAAMEQELKNIED
QLLALEETRKEV
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgtggatggctgtgcatgtggcatcccccagaatctggagcagagatcttcagaaggcc
tggagcagatggggatgcagactctgctctcaaagctcatcaagctcacagccttcacat
catcccagaacacaagcggagaaagccaaacgcagacaagcgcgagcaaaggccatactc
actagtgatgttaatgatcctggactgagctggtcagataaagagaaaataatgtatact
gctgcacttgtacctggagagaagaaagacagcactttgccctttccacaatcctacagt
ccagaatatgtggagtttggctggtatcagtggtgggagaaacagggattcttcagtcct
gagcaacatgtaagagttacagtttatatacatcaaagcatcaagggattccctcatgac
tggagtaaggagaacagggactttccttcctcgctttcctactatggcaatccggacaaa
atgtttgcaaagcttctgctcgagcgctgtaagggccaggttaacatcttgtcggtggtt
gagaggaagctgatgaaggagcaggggaagtccagacaggactacagtagagaggagttc
ctcaaacaggtctggagatggaaaaacgaaaagggggatgaaatttatcatcagctaaga
aaattaggtgcatctcttgactggagcagagcctgttttacaatggatccgggtttcagt
agtgctgtcacagaggcctttgtcaggctgtgtgactctgggctcatctatcgctctgaa
ggtctggtcaactggagctgtgcgttagagtctgccatctcagatatagaggtggactca
aaggagctgtctggcaggactcttctgcctgttcccggctatcagcagaaagtggagttt
gggatcatggttacatttgcatatccgctggagggacaggaaggagaggttacagtttca
accactcgtccagagacaatgctgggagatgtagccattgctgttcatcccgatgatgct
cgatataaagctcttcatggcaaacactgcaagcatccattcacagagcacttattaccc
attgtcactgactctatggtggatatgacatttggcacaggtgctgttaaagtgacacca
gctcatgaccacactgacttcctgctttctcagagacattcactcccacgcctcactgtg
attggaggagatgggaacatgacctcagactgcggccagtggctagagggtgttaaacga
tttgatgcaagggaacgagtaattactgcactgatggagaggaagctgttcagaggaaag
aaggatcatcccatgtcattaccaatctgcagccgttctggagatgtcattgaaccattg
ctgaagaaacagtggtttgtgcgctgtcaggaaatgggcaggaaagcagttgaagcagtg
gaagaaggagaactgcagataattcctcacttttacactaaaatgtggaagagctggctg
tccaacatcagcgattggtgtatttccagacagctttggtggggtcatcagataccagcc
tatcgagtgacacttcaaaactcaaaagacacagaagaggagcagtgggtttggggtaga
aatgctgcagaggctcgacaacgtgccgctgtgaagtttggagtgaatcctgatgccata
acactcacacaggacccagacgtgcttgatacttggttctcctctggtctcttcccgttt
gcgatgctcggttggcctcagcagacagaagacttgaaacagttctaccccaattccatt
ctggaaacaggaagtgacctcatcttcttctgggtggccaggatggtgatgctgggccga
gaattgaccggccagctgccctttaaacaggtgctctttcactctctggtgagggataaa
tacgggcggaagatgagtaaatctttaggaaatgtcattgaccctcttgatgtcatctca
ggggtttctttggagagacttcaagagaaagtcaaagaaggaaacttggatccgagggaa
agcattgttgccatggaagcacagaaaaaagatttccctaaagggattccagagtgcggg
acagacgctttgaggtttgcgctctgctcttataaagcccagggagaggacatcagcctg
tctgtgtctcacgtgctgagctgtagacatttctgtaataagatgtggcagaccgtgcgc
ttcaccctcgccgcattgcatgatgcaagtttaccgtcatcgttagcagagacccatcct
ctctccagtatggacaagtggatctgttcacgtctgtacagaacagttcagcagtgtgag
aggggttttgagagctatgagctccacatggtcacatctgccctgcactctttctggctc
cacagtctgtgtgacgtctacctggaaagtatcaagccagttttgaaaggtgaaggctct
ggaagtgaggaacagagagttcgagaaaggcaggtggccacatctgtgttgtttcacagt
gtgtctatctctctcgctctcctctcacccttaatgccgttcctcacggaggagctgtgg
cagagactcctgccttatgctgactctgacnagacctccagcagcctgtgtgtgcagccc
tacccgaagacctcacagctgattgcagctatggagcaggagctgaagaacattgaggac
caacttttggctttggaagaaacaaggaaagaagtctaa
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