KEGG   Garra rufa (doctor fish): 141290241
Entry
141290241         CDS       T11039                                 
Symbol
jarid2b
Name
(RefSeq) protein Jumonji
  KO
K11478  protein Jumonji
Organism
grf  Garra rufa (doctor fish)
Pathway
grf03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:grf00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    141290241 (jarid2b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:grf03036]
    141290241 (jarid2b)
Chromosome and associated proteins [BR:grf03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    141290241 (jarid2b)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.2
     141290241 (jarid2b)
SSDB
Motif
Pfam: JmjC ARID JmjN zf-C5HC2 NolB
Other DBs
NCBI-GeneID: 141290241
NCBI-ProteinID: XP_073678538
LinkDB
Position
17:complement(10051312..10144801)
AA seq 1483 aa
MCFGQVEFLFQKLPSEFGKIFSTGFKFKGEESAAAQTRIRMEHVAAFSPPRREKDGSHAR
HLRASGKHTGTAVDCLSRYWLCPVANSRFCGIMPDGFILAVTDLSPVQTQTEGEGLCQSD
SLYDLIDRNLGGSTETSGCMLGCLASSVNPVVRDQQTFTSSIVVCARGARFNGSYGLLML
LNNLSGGDDDNDGMPWSEERVVRKVLYLSLKEFKSAQKRQLGDDLSNGGKGPNASLSNGQ
LNGCGSKGGLKKNGSCSQSTDGSSEYSEDCPAKKRPRLHAQRKFAQSQPNSPSTTPVKMA
DPSLPTPLTHITFLSSRKPKTEDFLTFICLRGSPALPSNVAYFGCSQDAEDLDDEEEIEE
EKPPSVASTSCQSTPKKGKLPGKINGIVLNGLKVHKDKELTPRSRGRESSVGRDRSEGCD
ASGEISHKHTAATAKSHNTNGHNYRRAAEELRKQVSKVNGLTRASSHTAGAKKSKDFRLP
SKTVKYTATVTKGHVTYTKAKRELVKKAKLNHSKHAASAGLRAYSNNHHHHSHHPTSNGH
GRPQLSHSGKAQSINAKTRKQVLLTNGVHKLTNGGRPNGRLNGRHSARVEEEDGRQVRQG
LRNSKRRSDAITILGTESDEVKTKPPVTEVKKAKLQTSPLETRSKKALSQFKSPNTVTIA
HSITEMAASPTQKMGPAPPPSPPAAPASPSMPQNPATPEPARQRPKRASAGKLMFIRQAQ
QRAQTNPALNRTTSTTSASKTFKPAEPTHTPPPRPDRDRERERRRPGWAALGEVPIFKPT
SREFQDPLVYLDSVRERAESSGLCRVLPPPDWRPECKLNDDMRFVTQVQRIHKVGRRWGP
NVQKLACIKKHLKSQGISMDEPPLIGECTSNCMITTAFVGGCEVDLARFSELVFDMGGMQ
QVMDLKKWSRLADLLRIPKSAQDRLAKLQEAYLQYLLSYDLLSPEEHQRLEQEVLAEKEA
LERKRGPLEGHSDSGQRSLALPRYEPKNGLTGLNHRNGFRNHNKEPDTQRQAGRRRLFAQ
EKKGEKVDSDEADEEAEDEGVLSDEHKCIYKGRSVSLTTFYRIARNTMMMCFNKEPGAAE
VEQDYWRIVEQRDCHVAVHYGKVDTNTHGSGFPVGKSEPFSKHGWNLTILPNNSGSILRH
LGAVPGVTIPWLNIGMVFSTSCWSQDQNRLPYIDYLHTGADCIWYSIPAEEKTKLDKVVH
TLLQANGTPGLEMLEKNIMISPEVLCREGIKVHRTVQQSGQFVVVFPGAFVSRVCCGYSV
SETVHFATPQWMNLGYEAAKDLKCRRIAKPFSMEKLLYQIATAEAKRENRLVLSTISSLL
KDLRNIEMKQRQDLYEAGLLSSARYCTHDNQSPADTRKKPRKWLALESSERRCQTCQHLC
YLSMVVQENENVVFCLECALQYVEKHKSCRGLKMMYRYDEEQINSLVNQVCGKALVKSVT
DGCNGTSPIKPPAKRGPRKRSAVELSLTHLPTHLSKSAAAAIS
NT seq 4452 nt   +upstreamnt  +downstreamnt
atgtgttttggccaggtagagtttctgtttcagaaactgccgtcagagtttggaaagatc
ttctccactggttttaagtttaaaggcgaggaatccgcagctgcgcaaacacgcatcaga
atggagcacgtggcggctttcagccctccccgtcgagaaaaagatggcagccatgcgcga
cacctgcgagcgagtggaaagcacactggtacggctgtggactgcttatcccgctactgg
ctttgccctgttgccaacagccgcttctgtggaataatgccagatggtttcattttggct
gtgacagatttgagtcctgttcagactcagactgaaggagagggtttgtgtcagagtgat
tctctttatgacctgattgacagaaaccttggtggaagtacagaaactagtggatgcatg
cttggttgtctagccagctccgtcaacccggtcgttagagaccaacagacttttacttca
tccattgtggtttgtgcacgtggtgcaagattcaatggctcttatggtctgctaatgctg
ctgaacaacctgtctggaggggatgatgataatgatgggatgccctggtcggaggagcgg
gtggtgcggaaggtgctctatctttcgttgaaagagttcaagagcgctcaaaagcgccag
ctcggtgacgacctcagcaatggaggaaaagggcctaatgcttccttgtcaaacgggcag
ctgaatggatgtgggtctaaaggaggccttaaaaagaacgggtcttgctctcagagcaca
gatggaagcagcgagtactcagaggactgcccggccaaaaagaggcccagactgcatgca
cagaggaagtttgctcagtctcaacccaactctcccagcaccacgccggtgaagatggcc
gacccctctctgcccacgccgctcacacatatcacattcctctcgagtcgcaagcccaag
acagaagacttcctcacattcatatgccttcgaggctcaccggcattacccagtaacgtg
gcctacttcggctgctctcaggatgcggaggatctggatgatgaagaggaaattgaggaa
gagaaaccaccaagtgtggcatctacgtcatgccagtctacacccaagaagggcaaactg
cctggcaagatcaacggaatcgtgttgaatggccttaaggtacacaaggacaaagagctc
actcccagatccagaggcagagagtcgtctgtgggaagagatcgcagcgaagggtgtgac
gcatcgggtgagatctcccacaagcacactgcggccacagccaagagccacaacaccaac
ggccacaactacagacgagctgcagaggaactccgcaagcaggtctcgaaagtaaatgga
ctcacacgggcatcatcgcatacggccggtgccaaaaagtcgaaagacttccgtctgccg
tccaaaactgtgaagtacacagccaccgtgaccaagggccacgtcacttacaccaaagca
aaacgagaactggttaagaaagccaaactcaaccacagcaagcacgctgcttctgctggc
ctccgtgcttacagcaacaaccaccaccatcattctcatcatccaaccagcaacggccat
ggccggccccagctctctcactcaggaaaagcccaaagtatcaatgcaaaaacccgcaaa
caggtgctattaacgaatggggtgcataagttgactaacgggggccggcctaatggcagg
cttaatggacgccacagtgccagggtagaggaggaagacggccggcaagtgcggcaggga
ctgcggaactctaaacgcagaagtgatgccattacgattcttggaactgagagtgacgaa
gttaaaactaagccgcctgttactgaggttaaaaaagctaaactgcagactagcccactg
gaaactcgcagcaagaaggccctgagtcagttcaagtcccccaacacagtcactattgca
cacagtatcactgaaatggccgcctcccctactcagaaaatgggtcctgcccctcctccg
tcgccccctgctgctcccgcctccccatctatgccccagaaccccgcaacccctgagcca
gcacgtcagcggcccaagcgcgcctctgctggcaaactgatgtttatcagacaagcacag
cagagggcccaaactaaccccgctctcaaccggaccacatccactacctcagccagcaag
accttcaaaccagcagagcccacacacacgcctccaccacggccggacagagacagggag
cgggagaggagaaggccagggtgggcagcccttggggaggtgcctattttcaagcccacc
tccagggagtttcaggaccctttggtgtacctcgactcagttcgggaacgggccgagtca
tctggactgtgcagagtgttgcctcctcctgactggaggccagagtgcaaactcaacgac
gatatgcgctttgtgacacaggttcagcgcatccacaaggtgggtcggcgctggggcccc
aatgttcagaaactggcttgcattaagaagcacctcaaatctcagggcatctcaatggac
gagccacctcttataggtgagtgcacttcaaactgtatgattacaactgcttttgttggt
ggctgcgaagtagacctagctcgtttttctgagctagtcttcgacatgggtggaatgcag
caggtgatggacctgaaaaaatggagccggttggccgacctgcttcgcattcccaaatca
gcacaggaccgtctggccaagctccaggaggcctacctccagtacctgctctcttatgac
ctgctctctcctgaagagcaccagcgactggagcaggaggtgctggcagaaaaggaagct
ctggaacgcaagcgaggacccctggagggccactcggatagcggccagcggtctctggct
cttccccgttacgaacccaagaacgggctcactggcctcaaccaccgcaatggcttccgc
aatcacaacaaagagccagacacccagcggcaggccggccgccgcagactgtttgctcag
gaaaagaaaggggaaaaagtggacagtgatgaggcagatgaggaggcggaagatgaaggt
gttctcagtgacgagcacaaatgtatatacaaggggagatcggtatctttgaccaccttt
tacagaatagcaagaaatactatgatgatgtgcttcaacaaagagcctggggctgctgaa
gttgagcaagattattggcggatagtggagcagagggactgccatgtcgcagtgcattat
gggaaagtggacacaaacacacacggaagcggcttccctgtgggcaagtccgaacccttc
tccaagcatggatggaacctcactatccttcccaataactctggatccattctgcgccat
cttggtgctgtgcctggggtaactattccctggctgaacattggcatggtgttttctacc
tcatgctggtcacaagaccaaaaccgccttccatacattgattacttacacactggtgct
gattgcatttggtattctattcctgctgaggaaaagactaagcttgataaagtggtgcac
acactgctacaagccaacggcacaccgggacttgaaatgctggagaagaatattatgatt
tctccagaggtgctttgtcgtgaggggatcaaggtccaccgtacggtccaacagagcggg
cagtttgtggtggtcttccccggtgcgtttgtgtccagggtgtgctgcggctacagtgtg
tctgaaactgtgcactttgccacaccacagtggatgaacctgggctacgaggctgctaag
gacctgaaatgcaggcgcatagcaaaacccttctctatggagaagctactctaccagatc
gccacagccgaggccaaacgagaaaacagacttgtgctcagtacaatctcttctcttctc
aaagatctcaggaacatagagatgaagcaaaggcaggatctgtatgaagcagggctgctc
tcctctgcacgctactgcactcacgacaaccaatcacctgctgacaccaggaagaagccg
cgcaagtggctggcgctggagtcatctgagagacgctgccaaacgtgccagcatctctgc
tacctatctatggtggtgcaggagaatgaaaatgtggttttctgtctggagtgtgcgctg
cagtatgtggagaaacacaaaagctgccgtggcctcaagatgatgtaccgctatgatgag
gagcagatcaacagtttggtgaatcaggtgtgtggtaaagccctggtgaaaagcgtgaca
gacggctgcaacggcaccagccccatcaaaccacccgccaagcgcggcccccgcaaaagg
tccgccgtggagctgtccctgactcacctgccgacccacctgtccaaaagtgccgcggcc
gccatctcatga

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