Garra rufa (doctor fish): 141290241
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Entry
141290241 CDS
T11039
Symbol
jarid2b
Name
(RefSeq) protein Jumonji
KO
K11478
protein Jumonji
Organism
grf Garra rufa (doctor fish)
Pathway
grf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
141290241 (jarid2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
grf03036
]
141290241 (jarid2b)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
141290241 (jarid2b)
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
141290241 (jarid2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
NolB
Motif
Other DBs
NCBI-GeneID:
141290241
NCBI-ProteinID:
XP_073678538
LinkDB
All DBs
Position
17:complement(10051312..10144801)
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AA seq
1483 aa
AA seq
DB search
MCFGQVEFLFQKLPSEFGKIFSTGFKFKGEESAAAQTRIRMEHVAAFSPPRREKDGSHAR
HLRASGKHTGTAVDCLSRYWLCPVANSRFCGIMPDGFILAVTDLSPVQTQTEGEGLCQSD
SLYDLIDRNLGGSTETSGCMLGCLASSVNPVVRDQQTFTSSIVVCARGARFNGSYGLLML
LNNLSGGDDDNDGMPWSEERVVRKVLYLSLKEFKSAQKRQLGDDLSNGGKGPNASLSNGQ
LNGCGSKGGLKKNGSCSQSTDGSSEYSEDCPAKKRPRLHAQRKFAQSQPNSPSTTPVKMA
DPSLPTPLTHITFLSSRKPKTEDFLTFICLRGSPALPSNVAYFGCSQDAEDLDDEEEIEE
EKPPSVASTSCQSTPKKGKLPGKINGIVLNGLKVHKDKELTPRSRGRESSVGRDRSEGCD
ASGEISHKHTAATAKSHNTNGHNYRRAAEELRKQVSKVNGLTRASSHTAGAKKSKDFRLP
SKTVKYTATVTKGHVTYTKAKRELVKKAKLNHSKHAASAGLRAYSNNHHHHSHHPTSNGH
GRPQLSHSGKAQSINAKTRKQVLLTNGVHKLTNGGRPNGRLNGRHSARVEEEDGRQVRQG
LRNSKRRSDAITILGTESDEVKTKPPVTEVKKAKLQTSPLETRSKKALSQFKSPNTVTIA
HSITEMAASPTQKMGPAPPPSPPAAPASPSMPQNPATPEPARQRPKRASAGKLMFIRQAQ
QRAQTNPALNRTTSTTSASKTFKPAEPTHTPPPRPDRDRERERRRPGWAALGEVPIFKPT
SREFQDPLVYLDSVRERAESSGLCRVLPPPDWRPECKLNDDMRFVTQVQRIHKVGRRWGP
NVQKLACIKKHLKSQGISMDEPPLIGECTSNCMITTAFVGGCEVDLARFSELVFDMGGMQ
QVMDLKKWSRLADLLRIPKSAQDRLAKLQEAYLQYLLSYDLLSPEEHQRLEQEVLAEKEA
LERKRGPLEGHSDSGQRSLALPRYEPKNGLTGLNHRNGFRNHNKEPDTQRQAGRRRLFAQ
EKKGEKVDSDEADEEAEDEGVLSDEHKCIYKGRSVSLTTFYRIARNTMMMCFNKEPGAAE
VEQDYWRIVEQRDCHVAVHYGKVDTNTHGSGFPVGKSEPFSKHGWNLTILPNNSGSILRH
LGAVPGVTIPWLNIGMVFSTSCWSQDQNRLPYIDYLHTGADCIWYSIPAEEKTKLDKVVH
TLLQANGTPGLEMLEKNIMISPEVLCREGIKVHRTVQQSGQFVVVFPGAFVSRVCCGYSV
SETVHFATPQWMNLGYEAAKDLKCRRIAKPFSMEKLLYQIATAEAKRENRLVLSTISSLL
KDLRNIEMKQRQDLYEAGLLSSARYCTHDNQSPADTRKKPRKWLALESSERRCQTCQHLC
YLSMVVQENENVVFCLECALQYVEKHKSCRGLKMMYRYDEEQINSLVNQVCGKALVKSVT
DGCNGTSPIKPPAKRGPRKRSAVELSLTHLPTHLSKSAAAAIS
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atgtgttttggccaggtagagtttctgtttcagaaactgccgtcagagtttggaaagatc
ttctccactggttttaagtttaaaggcgaggaatccgcagctgcgcaaacacgcatcaga
atggagcacgtggcggctttcagccctccccgtcgagaaaaagatggcagccatgcgcga
cacctgcgagcgagtggaaagcacactggtacggctgtggactgcttatcccgctactgg
ctttgccctgttgccaacagccgcttctgtggaataatgccagatggtttcattttggct
gtgacagatttgagtcctgttcagactcagactgaaggagagggtttgtgtcagagtgat
tctctttatgacctgattgacagaaaccttggtggaagtacagaaactagtggatgcatg
cttggttgtctagccagctccgtcaacccggtcgttagagaccaacagacttttacttca
tccattgtggtttgtgcacgtggtgcaagattcaatggctcttatggtctgctaatgctg
ctgaacaacctgtctggaggggatgatgataatgatgggatgccctggtcggaggagcgg
gtggtgcggaaggtgctctatctttcgttgaaagagttcaagagcgctcaaaagcgccag
ctcggtgacgacctcagcaatggaggaaaagggcctaatgcttccttgtcaaacgggcag
ctgaatggatgtgggtctaaaggaggccttaaaaagaacgggtcttgctctcagagcaca
gatggaagcagcgagtactcagaggactgcccggccaaaaagaggcccagactgcatgca
cagaggaagtttgctcagtctcaacccaactctcccagcaccacgccggtgaagatggcc
gacccctctctgcccacgccgctcacacatatcacattcctctcgagtcgcaagcccaag
acagaagacttcctcacattcatatgccttcgaggctcaccggcattacccagtaacgtg
gcctacttcggctgctctcaggatgcggaggatctggatgatgaagaggaaattgaggaa
gagaaaccaccaagtgtggcatctacgtcatgccagtctacacccaagaagggcaaactg
cctggcaagatcaacggaatcgtgttgaatggccttaaggtacacaaggacaaagagctc
actcccagatccagaggcagagagtcgtctgtgggaagagatcgcagcgaagggtgtgac
gcatcgggtgagatctcccacaagcacactgcggccacagccaagagccacaacaccaac
ggccacaactacagacgagctgcagaggaactccgcaagcaggtctcgaaagtaaatgga
ctcacacgggcatcatcgcatacggccggtgccaaaaagtcgaaagacttccgtctgccg
tccaaaactgtgaagtacacagccaccgtgaccaagggccacgtcacttacaccaaagca
aaacgagaactggttaagaaagccaaactcaaccacagcaagcacgctgcttctgctggc
ctccgtgcttacagcaacaaccaccaccatcattctcatcatccaaccagcaacggccat
ggccggccccagctctctcactcaggaaaagcccaaagtatcaatgcaaaaacccgcaaa
caggtgctattaacgaatggggtgcataagttgactaacgggggccggcctaatggcagg
cttaatggacgccacagtgccagggtagaggaggaagacggccggcaagtgcggcaggga
ctgcggaactctaaacgcagaagtgatgccattacgattcttggaactgagagtgacgaa
gttaaaactaagccgcctgttactgaggttaaaaaagctaaactgcagactagcccactg
gaaactcgcagcaagaaggccctgagtcagttcaagtcccccaacacagtcactattgca
cacagtatcactgaaatggccgcctcccctactcagaaaatgggtcctgcccctcctccg
tcgccccctgctgctcccgcctccccatctatgccccagaaccccgcaacccctgagcca
gcacgtcagcggcccaagcgcgcctctgctggcaaactgatgtttatcagacaagcacag
cagagggcccaaactaaccccgctctcaaccggaccacatccactacctcagccagcaag
accttcaaaccagcagagcccacacacacgcctccaccacggccggacagagacagggag
cgggagaggagaaggccagggtgggcagcccttggggaggtgcctattttcaagcccacc
tccagggagtttcaggaccctttggtgtacctcgactcagttcgggaacgggccgagtca
tctggactgtgcagagtgttgcctcctcctgactggaggccagagtgcaaactcaacgac
gatatgcgctttgtgacacaggttcagcgcatccacaaggtgggtcggcgctggggcccc
aatgttcagaaactggcttgcattaagaagcacctcaaatctcagggcatctcaatggac
gagccacctcttataggtgagtgcacttcaaactgtatgattacaactgcttttgttggt
ggctgcgaagtagacctagctcgtttttctgagctagtcttcgacatgggtggaatgcag
caggtgatggacctgaaaaaatggagccggttggccgacctgcttcgcattcccaaatca
gcacaggaccgtctggccaagctccaggaggcctacctccagtacctgctctcttatgac
ctgctctctcctgaagagcaccagcgactggagcaggaggtgctggcagaaaaggaagct
ctggaacgcaagcgaggacccctggagggccactcggatagcggccagcggtctctggct
cttccccgttacgaacccaagaacgggctcactggcctcaaccaccgcaatggcttccgc
aatcacaacaaagagccagacacccagcggcaggccggccgccgcagactgtttgctcag
gaaaagaaaggggaaaaagtggacagtgatgaggcagatgaggaggcggaagatgaaggt
gttctcagtgacgagcacaaatgtatatacaaggggagatcggtatctttgaccaccttt
tacagaatagcaagaaatactatgatgatgtgcttcaacaaagagcctggggctgctgaa
gttgagcaagattattggcggatagtggagcagagggactgccatgtcgcagtgcattat
gggaaagtggacacaaacacacacggaagcggcttccctgtgggcaagtccgaacccttc
tccaagcatggatggaacctcactatccttcccaataactctggatccattctgcgccat
cttggtgctgtgcctggggtaactattccctggctgaacattggcatggtgttttctacc
tcatgctggtcacaagaccaaaaccgccttccatacattgattacttacacactggtgct
gattgcatttggtattctattcctgctgaggaaaagactaagcttgataaagtggtgcac
acactgctacaagccaacggcacaccgggacttgaaatgctggagaagaatattatgatt
tctccagaggtgctttgtcgtgaggggatcaaggtccaccgtacggtccaacagagcggg
cagtttgtggtggtcttccccggtgcgtttgtgtccagggtgtgctgcggctacagtgtg
tctgaaactgtgcactttgccacaccacagtggatgaacctgggctacgaggctgctaag
gacctgaaatgcaggcgcatagcaaaacccttctctatggagaagctactctaccagatc
gccacagccgaggccaaacgagaaaacagacttgtgctcagtacaatctcttctcttctc
aaagatctcaggaacatagagatgaagcaaaggcaggatctgtatgaagcagggctgctc
tcctctgcacgctactgcactcacgacaaccaatcacctgctgacaccaggaagaagccg
cgcaagtggctggcgctggagtcatctgagagacgctgccaaacgtgccagcatctctgc
tacctatctatggtggtgcaggagaatgaaaatgtggttttctgtctggagtgtgcgctg
cagtatgtggagaaacacaaaagctgccgtggcctcaagatgatgtaccgctatgatgag
gagcagatcaacagtttggtgaatcaggtgtgtggtaaagccctggtgaaaagcgtgaca
gacggctgcaacggcaccagccccatcaaaccacccgccaagcgcggcccccgcaaaagg
tccgccgtggagctgtccctgactcacctgccgacccacctgtccaaaagtgccgcggcc
gccatctcatga
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