Garra rufa (doctor fish): 141290310
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Entry
141290310 CDS
T11039
Symbol
pogza
Name
(RefSeq) pogo transposable element with ZNF domain isoform X1
KO
K22594
pogo transposable element with ZNF domain
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
grf03036
]
141290310 (pogza)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
141290310 (pogza)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DDE_1
zf-Di19
zf-C2H2_7th_ZNF462
Motif
Other DBs
NCBI-GeneID:
141290310
NCBI-ProteinID:
XP_073678588
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All DBs
Position
17:24902312..24912122
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AA seq
1312 aa
AA seq
DB search
MAESDLYMQCEEDDLEPCQSFTENRNQIYNKVTVGANDALIPIESDGTSEPTSATTEITN
QAVPLASAPAVTLLPNAVQPAGAAGGQTIFISAQPNPGQPLAGSMSLGTSLGYFLNGQPI
SFLTSAQTPQLIAPRMVTPASSVQQTTPGKISALQIPVTLTINNPSNLQSITSTAPGVTT
LNVTPSNVLPATNPGATIKVIKLTKYTGAPASAGQVVSSLVQPTKAVTIQNNLTNRAPAP
LLSGGLFQVTKPQAQNLLPAATATNALKRGSSSSKLCVRCKTFYQKSQSLRGYYCQCNQE
LIKSVQELKAQTRKRVKRTSDKTRSNPSTSETPVSCSTPSKTSLTHVTTSEIPEGVPNPR
SGDFDDQGRMIMLVDDFFYGQHPGHPAPVRPNAEPITMKCQLCDKKMKGNIKLMNHTKHH
LELERQTGEVDYHTMCQHCFRNFSTPFRLQCHVETVHNKAESSKVCKICEWSFEDEPLFL
NHMKHAHKPGEMPYMCQVCEFRSSFYDDVINHFTEKHKNTCILMCPYCLKVFRSCGGFQM
HFTRHQKKTARHCDKCRLQFIREKDEWQHRQKFHRTFIKPKQLEGLVPGTRVTIRAYADS
TDKRDAFVAPPQNTPSNTPSTVASQNVPKITNKVIPIKKKPVESMMELMVKLQSQCKPTE
KHYCMECNYEIPYFSNHFPTYVSCSLCRYNTCCSRAYANHMISVHVPRKSTKKYITLYKP
CPKKGRLSCTTCRYKTQVGDLMAKHLADNPTHQASRCTIQEGFSRGYKRFVFIPTDLLRG
GQRLNNGIFLPLQVKQVDGSSFPLTSKPLPQPSYTIMLPASPACTPVLPIQVQPNEPSVV
PDKICEATPDASKPALKGGLSEVDTEHTVENSFTVAQLKVILYALCFGVPQAANHFDTPP
EEVQSLLMKRQLQLEPSRSQEGLTPQVADSLVEWVLCQREQQLPIDEANLFGFLSSHGAR
DLSYNSVVDFLLRHDLGLQAFATSNKSLPCKSQELESSFSSFLKQQVTSQTFRLSSIAAM
DELSIFVDMEQLDEASADSSSMLSAFKLMGTMDPLIDVVFTALADGTTLSTMVFLRGEPL
EKDASLLPDFFILEARPEGFTDEERLQLWLDKVWCQHVDPSSGGKGLLMMDTYKGHMSNE
FLVTLNRANTLPGLIPRSCSRRLQPLEACMGPVLREFLQARWSEHVTKAPQELVGAKPAD
LALLLSRWLVEVLDVLKAESKLLFRSFDRVLSPTPEAASEEPSELVRSLTEALLVSKSQG
DKVEEQKVETSSVVSAESLSSPQSGILALRKIFEKDSDVESFHGFEESEIID
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatcagatctttacatgcaatgtgaagaagatgatctggagccatgccaaagt
tttacagaaaacaggaaccagatatataacaaagttactgtaggtgctaatgatgcactg
ataccaatagagtctgatggcacctctgaaccaacatcagctactactgaaatcacaaat
caagctgtgcctttggcatctgctcctgctgttacgttactgcctaatgctgtccagcca
gctggagctgcaggtggccaaaccatcttcatcagtgcacagccaaatccaggacagcct
ctggcgggctcaatgagtttgggaacatcacttggttactttttgaacggacaacctatt
agttttctgacttctgctcagacaccccagttaattgctcctcggatggttaccccagca
agttcagtacaacaaacaacccctggaaaaatctctgcattgcagatcccggtcaccttg
accatcaacaacccctccaacttacaaagcatcacctccacagcccctggagtgaccact
ctgaacgtgacaccctccaacgtcctaccagccacaaatccaggagcaacaataaaagta
ataaagctcacaaagtatactggagcacctgcatctgctggtcaagtagtgagttcatta
gtgcagcctaccaaagcggtcaccatccaaaacaatttaacaaacagagctccagctccg
ctcctgtctggtgggctttttcaggtcacgaaacctcaagcgcaaaaccttcttcctgct
gccacagcaactaacgcattgaagaggggctccagttcatcaaaattgtgtgttcgctgt
aaaaccttttaccaaaagagccagtctctccgtggatactactgtcaatgcaatcaagaa
cttatcaagagtgtccaggagctgaaagcccaaactagaaaaagggtcaagcgtacaagt
gacaaaacccgctcaaacccctccacatccgagactccagtttcctgctccacaccctca
aaaacatctctcacacacgtcaccacttctgagatacccgagggagtgcctaatcctcgc
tctggggattttgacgaccagggaagaatgatcatgctagtcgatgacttcttctatggg
caacatcctggccaccctgcacccgtaagacccaatgcagagcctatcacaatgaaatgc
caactctgtgacaagaagatgaagggcaacatcaagctgatgaaccacacgaaacatcac
ttggagttggagcgccaaacaggggaagtagactatcatactatgtgccagcactgcttc
agaaacttctcaacacctttccgtctgcagtgccacgttgagacagtccataacaaagca
gagtcctcaaaagtgtgcaagatctgcgagtggtcctttgaggacgaacctctctttctg
aaccacatgaaacatgcgcacaagcctggcgagatgccctacatgtgtcaggtgtgtgag
ttccgctcctccttctacgacgatgttataaaccacttcacagagaagcacaagaacacc
tgcatcttaatgtgcccctattgcttaaaagtatttaggtcttgcggtggcttccaaatg
cacttcactagacatcagaaaaaaacagcacggcattgcgacaaatgcagacttcagttc
atccgtgaaaaggacgagtggcaacacagacaaaagtttcacaggacttttatcaagccc
aaacaattggagggccttgtgcctggcactagggtaaccatccgagcttatgctgacagt
actgacaaaagagatgcttttgtagcacctccacagaatactccttcaaacaccccatca
actgtagcatctcaaaatgtaccaaaaataaccaataaagtaattcccattaagaaaaag
ccagtggaaagcatgatggagctaatggtcaagttgcagagtcagtgcaaaccaacagaa
aaacactactgcatggaatgcaactatgagattccgtatttttccaaccatttccccacc
tatgtgagctgttccctctgccgatacaacacctgctgttccagagcatatgccaatcac
atgatcagtgtacatgttcctcgcaaaagcaccaaaaaatatatcaccctgtacaaaccc
tgcccaaagaaggggcggttaagctgtaccacatgtaggtacaaaactcaggttggagat
ttgatggccaaacatcttgctgataatcctacacatcaagcaagccggtgcaccatacag
gaaggattttcacgtggctataaaagatttgtcttcatcccaacggaccttctccgagga
ggtcaaagactcaacaatggcatctttttgcctttgcaagtgaagcaagtggacgggagt
tcatttcctctcacttctaaaccccttcctcaacccagctacacaataatgctccctgct
agccctgcttgcacgccagtactacccattcaggttcaacctaatgaaccaagtgtggtt
ccagacaaaatatgtgaagccacgccggatgcttcaaagccagctcttaagggaggcctt
tccgaagtcgatacagaacatactgttgaaaactcatttaccgtggcacagctaaaggtc
atactatacgccctctgcttcggagtcccccaggctgccaatcacttcgacaccccgccg
gaagaagtccagtctttgcttatgaaaaggcagcttcagcttgagccctcgagaagtcaa
gaaggtttgacaccacaggtggctgatagcttagtcgaatgggtgctatgtcaacgtgag
caacaactacctatcgatgaagcgaacctttttgggttcctgagcagtcatggtgcacga
gatctctcttacaactcagtggtcgatttcttgctacgccatgatctgggcttgcaggcg
tttgccacgtccaacaagtcgctaccatgtaaatcccaggagcttgagagctccttcagc
agctttctgaaacagcaagtcacctcacaaacctttaggttgtcttctattgccgccatg
gatgagctttccatctttgtagatatggagcagctagatgaagcctctgcggattcgtcg
tccatgttgtctgcttttaagttgatgggcaccatggatcctctcatagatgttgtcttc
acagccctggctgatggaaccacattatccaccatggtttttctcagaggtgaacctctt
gagaaggatgcaagtttgttgccagacttcttcatcctggaggcaagaccagaagggttc
acagatgaggaaagacttcagctttggttggacaaagtgtggtgtcaacacgtcgaccct
agttctggaggaaaagggttgctgatgatggacacgtacaaaggccacatgtccaatgag
ttcttggtgacgctcaacagggctaacactcttccaggcctgatccctcgcagttgttct
cgccgtctacaacctctcgaagcctgtatggggccggtgttacgtgagtttctgcaggct
cgctggagcgagcatgtgaccaaagcgccacaagaactggttggagccaaaccagctgat
cttgctcttctcctgtcccgctggcttgtcgaggtactagatgttcttaaagcagagtcc
aaactacttttccgctcttttgatcgggttttgagcccaaccccagaggcagcatctgag
gaaccttctgagctggtgcgaagtcttactgaagctctccttgtcagtaaatcacaagga
gacaaagttgaagaacagaaagttgagacttccagtgtcgtttctgcagaatctctgtca
tcgccacaatctgggatacttgcgttgagaaagatctttgagaaagacagtgatgtggag
tctttccatggttttgaggaatcggaaattatagattaa
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