Garra rufa (doctor fish): 141290311
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Entry
141290311 CDS
T11039
Symbol
vps45
Name
(RefSeq) vacuolar protein sorting-associated protein 45
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
grf Garra rufa (doctor fish)
Pathway
grf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141290311 (vps45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141290311 (vps45)
Membrane trafficking [BR:
grf04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
141290311 (vps45)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sec1
B12-binding
Motif
Other DBs
NCBI-GeneID:
141290311
NCBI-ProteinID:
XP_073678590
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Position
17:complement(24881092..24893969)
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AA seq
568 aa
AA seq
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MNVTLAVKQYISKMIESSGPGMKVLLMDKETTGIVSVVYTQSEILQKEVYLFERIDSQNR
DNMKHLKAICFLRPTKENVEHLIQELRRPKYSVYFIYFSNVISKSEIKALAEADEQEVVA
EVQEFYGDFIAVNPHVFSLNLQGVSRGRSWEPSLLPRVTQGLTSVLLSLKKCPMIRYQLS
SDMSKRLAESVKQIITKEYELFDFRKTEVPPLLLILDRSDDAITPLLNQWTYQAMVHELL
GLSNNRIDLSRVPGISKDLREVVLSAENDEFYANNLYLNFGEIGTNIKNLMEDFQKKKPK
DKQKLESITDMKAFVDNYPQFKKMSGTVSKHVTVVGELSRLVSERQLMEVSEVEQELACQ
NDHSNAQQSVRRLLQNPRLSETDAVRLVMLYALRYEKHSSSILPSLMEDLNRKGVSERHR
KMVQAVVEYGGKRVRGSDLITPTDAVSITKQFFKGLKGVENVYTQHQPLLHDTLDQLIKG
RLKDSQFPYLGPSSLRDRPQDIIVFIIGGATYEEALTVYNLNRTMPGVRIVLGGTAIHNT
KSFLEEVMLAVGSGGDRTQGRGRQQSRR
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgactctggctgtcaagcagtacatttccaaaatgatagagagcagcggaccc
gggatgaaggtgctgctgatggacaaggagacgactggtattgtaagcgtggtctacaca
cagtctgagatcctgcagaaagaagtctacctttttgagcgtattgactcacagaaccga
gacaacatgaagcaccttaaggcaatctgctttctccggccaaccaaggagaacgtagag
cacctgattcaagagcttcgtcggcccaagtatagtgtatacttcatctatttcagtaat
gtgatcagtaagagtgaaataaaggcattggctgaggcagatgaacaggaagtagtcgca
gaagtgcaggagttctatggagatttcattgctgtgaaccctcatgtcttctccctaaac
cttcaaggagtatccaggggtcgcagctgggagcccagtttactgcctcgcgtcactcag
ggtttgacatcagtgttactgtccctgaaaaaatgccccatgattcgctatcagctctct
tctgacatgtccaaaaggctggcagagagcgtcaaacaaatcattactaaggagtatgaa
ctgtttgacttcagaaaaacagaagtacctcctcttctcctgattttagacagaagtgat
gatgccattactccccttcttaatcagtggacgtatcaggccatggttcatgagctactg
ggcctcagtaataaccgcatagacctgtcgagagtgcctggaatcagtaaggacctacgg
gaggtggtcttgtctgcagaaaatgatgagttttatgcaaataacttgtatctaaatttt
ggtgagattggaacaaacatcaagaacctgatggaggatttccagaagaaaaaacccaag
gataaacagaaattagagtccataactgacatgaaggcatttgtggataattacccacag
tttaagaaaatgtcaggcacggtctcaaaacacgtaaccgtggtaggggagctgtctcgc
ctggtcagtgaaagacagctgatggaggtgtcagaggtggagcaggagttggcctgccag
aatgaccactccaatgcacaacagagcgtgaggcgactattgcagaaccctcggctttct
gaaactgatgctgtgcggctggtgatgctgtacgcgcttcgctatgagaaacacagcagc
agtattctgcccagccttatggaggatctcaaccgcaaaggggtgtcagagagacaccgc
aagatggtacaagccgtggtggaatacggtggcaaacgagtcagaggaagtgacctcatc
actccaacagatgcagtgtccattacaaaacagtttttcaaaggacttaagggagttgag
aatgtgtatacacagcatcagccgctactacatgacacgctggatcagctgatcaagggt
cgtttgaaggacagccagttcccctacctcgggccaagttctctgagagacagacctcaa
gacattattgtcttcataattgggggggccacttatgaggaggcattgactgtttacaac
ctgaaccgcacaatgccaggggtacgcatcgtactcggaggcacagccattcacaacact
aagagctttctggaggaagtgatgcttgcagtaggttcaggtggtgacagaacacaaggc
agaggccgtcagcagagccgacgctga
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