Garra rufa (doctor fish): 141290318
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Entry
141290318 CDS
T11039
Name
(RefSeq) keratin, type I cytoskeletal 50 kDa-like isoform X1
KO
K07604
type I keratin, acidic
Organism
grf Garra rufa (doctor fish)
Pathway
grf04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
141290318
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
grf04812
]
141290318
04147 Exosome [BR:
grf04147
]
141290318
Cytoskeleton proteins [BR:
grf04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
141290318
Exosome [BR:
grf04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
141290318
Exosomal proteins of other body fluids (saliva and urine)
141290318
Exosomal proteins of colorectal cancer cells
141290318
Exosomal proteins of melanoma cells
141290318
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
ApbA_C
Nuf2_DHR10-like
DUF2461
Motif
Other DBs
NCBI-GeneID:
141290318
NCBI-ProteinID:
XP_073678596
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Position
17:complement(37394664..37396260)
Genome browser
AA seq
362 aa
AA seq
DB search
MRAGSVYGGAGGYGTRISSASSSRSFSAGSGGGAGFGGGFNLADAIDVSANEKATMQNLN
DRLASYLEKVRSLKKANADLELKIRQFLESKATPAARDYSAYYATISDLQAKVCGLTIKN
ISIYLSIDNAKLAADDFRVKYENELAMRQSVEADIAGLRRVRDELTMTRSDLEMQIEGLK
EEQTFLKKNHEEDLLASRTQMGGQVNVEVDAAPQEDLTKIMAEIREQYEAVASKNRKDLE
AWFQAKSEALNKEVVESTETIQTSRSEMTELKRTLQSLEIELQSQLSMKASLEGTLADTG
SRYSSMLNSYQMQVTSLEQQLGQLRADLARQGQEYQMLLDIKTRLEMEIAEYRRLLDGES
TR
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgccggtagtgtgtacggaggagcaggaggatatgggacacgtatctccagtgcc
tcttcttctcgttcgttctctgctggtagtggtggtggtgctggtttcggaggtggtttc
aacctggctgatgccattgatgtgtctgcaaatgagaaagccaccatgcaaaacctgaac
gaccgtctggcctcctacctggagaaggtgcgctccctcaagaaggccaatgctgatctt
gagctgaagattcgccagttcctagagagcaaggccactcctgctgctcgtgactacagt
gcctattatgctacaatcagtgacctccaggccaaggtatgtggcttaactattaaaaat
attagcatctacttgagcattgacaatgccaagctggctgcagatgacttcagagtcaaa
tatgagaatgagctggccatgaggcagtctgtagaggcagacattgctggcctaaggagg
gtgcgggatgagctgaccatgaccagatctgatctggagatgcagattgagggtctaaaa
gaggagcagactttcctcaagaagaaccacgaggaggatctcttggcatcacgcacccag
atgggtggacaagtcaacgtagaggtggatgcagcaccacaggaagacctgacaaagatc
atggctgaaatccgtgagcaatacgaggctgttgctagcaagaaccgcaaagatcttgag
gcctggttccaggccaagagcgaagccctcaataaagaagttgttgagagcacagaaact
atccaaacgtccagatcagagatgacagagcttaaacgcacacttcagagtcttgaaatc
gagcttcaatcacaactcagtatgaaagcgtcactggaaggcactctggcagacacaggg
tcccgttactcctccatgttaaatagctaccaaatgcaggtgaccagcctggaacagcag
ctggggcagcttcgtgccgatctggcccgtcaagggcaagagtaccagatgcttctggac
atcaagaccagactggagatggagattgcagaatacagaagattgctggatggagagtca
acaaggtaa
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