Garra rufa (doctor fish): 141290340
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Entry
141290340 CDS
T11039
Symbol
sema6ca
Name
(RefSeq) semaphorin-6C
KO
K06842
semaphorin 6
Organism
grf Garra rufa (doctor fish)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
141290340
NCBI-ProteinID:
XP_073678617
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Position
17:45567021..45606937
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AA seq
914 aa
AA seq
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MVYEGKQMTNRTWRYSVVMVTVSLAWLLPVIATATPFPTDLQPISVVRLDDSHLYPSFQG
LMFNNETERLGLDYQRMIRIQHMLYIAARDHVFVVNLTTSVDKIIPQQILTWRSTDVSKC
AVRGRNSDECYNYIKVLVPRNDETLFACGTNALNPACRNYRLSTLEQVGQELLGQARCPF
ESRQSNVGVFAGGHFYSATVTDFQASDAVIYRSLGGEGRPVLRTVKYDSKWLREPHFLHA
VEYGYYVYFFFSEIAVEHTGTGKVVYSRVARVCKNDSGGSTRVLDRYWTSFLKARLNCSV
PGDTFFYFDVLQSLTNVLQINQRPAVVGVFTTQINSIPGSAVCGFYLDDIERVFNGRFKE
QKNSDSMWTPVPEEHVPKPRPGSCAGEGSASSYSSSVQFPDSVLSFIKTHPLMDESVPSI
NSQPLITSTTSRYKLTQIVVDTAAGPHKNRTVVFLGSEEGRVLKILSGTQGNSSHSSRLL
EDIDVFNPTRCSGERRVLGLELDKEHHALFVAFSSCIIRVPLSRCAQHATCKRRCLHTHD
PYCIWLRTGRCADVAPGFKAGFEQDIDGEQSHSFDTCDGMSAAGFDVNSAVDSSGVKQLP
DAAGLSDGFHYTLLGTCVLVAFVLGAVVSGLLVSCYCGQRSHQSQEPEASLQHALSLNSL
AKLNRLLDTKPEINDLASSQIYSSGPPCHQLPVKPHATEDEELVSNLPTPDSTPELPIKN
LKALNSQWERSHTHNSTLQVFSTNQTPSERNDDDVFKQTQNPDVSIMTSSLLPGDSGSLH
MPASYYSCLKETPETSTFQQIPLQMLPERPDASTGSSQRHVLIKMGNGVTTARQHSFNQK
SAHVGNIYEIHRPLIAGGSCLTRQHSYSEPPHLHRAAIIRRTASLKPQIPPKPTNIPSKT
LHLPSAAGHTKHNY
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggtttacgaaggaaagcagatgactaataggacatggcgttactctgtcgtcatggtg
acggtctctttagcctggctcctcccagtcatcgctactgccacgcccttccccacggat
ctgcagccaatcagtgtggtgcgtctggacgactcgcacctgtatcccagttttcagggt
ctgatgtttaataatgagacggagcgtctgggtttggactatcagcggatgatccggatc
cagcatatgctgtacatcgctgccagagaccatgtatttgttgtgaatctcactacttca
gtcgataaaatcatcccacagcagattctgacgtggagatctacagacgtgtcaaagtgc
gccgtgagaggaagaaacagcgatgagtgttataattacatcaaggttcttgtgcctcgt
aatgacgagactctgtttgcgtgtggaaccaatgcgctgaacccggcctgccgaaactac
agattgagtacgctggagcaggtcggtcaggagctgctgggtcaggcccgatgtccattt
gagtctcgccagtccaatgtaggagtgtttgcaggtggtcacttctattcggccacagtg
acggatttccaggcgagtgatgcagtgatctacagaagtttaggaggagaagggcgaccc
gtcctgcggaccgtcaaatacgactccaaatggctcagagagccgcactttctgcatgct
gtcgaatacggctactatgtgtatttcttcttcagtgagatcgcagtggagcacaccggc
accgggaaggtggtgtattcgcgtgtggcgcgtgtgtgtaagaacgacagcggtggctcc
acacgagtgttggatcgctactggacgtcgtttctgaaggcgcgtctgaactgctctgtg
cctggagacactttcttctacttcgatgtgctgcagtcgctcaccaatgtcctgcagatc
aaccagcggcccgctgtggtgggagtcttcaccacacagatcaacagcattcctggctca
gcggtgtgcgggttttatttggacgacattgagagagtgtttaatggaaggtttaaagag
cagaagaacagtgattcaatgtggaccccagtgccggaggaacatgtgcccaaaccacgt
ccaggttcatgcgctggtgaaggttcagcgtcgtcatactcgtcctccgttcagtttcca
gactctgtgctctcgtttattaagacgcacccgctgatggacgagtctgtgccatcaatc
aacagccaaccgctgatcaccagcaccaccagcaggtataagctgactcagattgttgtg
gacacggcggctggacctcataagaaccgcaccgttgtgtttctgggttctgaagaagga
cgcgtcctgaagatcctgagcggcactcaaggcaacagttcacacagctccagactgctg
gaggacatcgacgtcttcaaccccacaaggtgtagcggagagcgtagggtgttgggtctg
gagttggataaggagcatcacgctctgtttgtggcgttttccagttgcatcatcagagtt
cccctcagccgctgcgctcaacacgccacctgcaagagacgctgtctccacacacatgac
ccatactgcatctggctgcggacggggcgctgtgctgacgttgccccagggttcaaggca
ggttttgagcaggacattgacggcgaacaatcacattcatttgatacgtgcgatgggatg
tcagcagcaggatttgatgtgaactctgctgtggattcatctggtgtgaagcagcttcct
gatgcggcgggtctgagcgacggctttcactacactcttctgggcacatgcgtgttggtg
gccttcgtattgggtgccgtcgtgtcaggtttgctggtgtcatgttactgcggtcaaaga
tcccaccaatcacaggagcctgaggcatcgcttcagcacgcgctctcgctcaacagcctc
gccaaactcaaccgtcttctagacaccaaaccggaaataaacgacctcgcatcctctcaa
atctacagctccggaccgccctgccaccagctgcccgttaaaccacacgcgactgaggat
gaagaattggtctcgaatctgcccaccccagattcgacgcctgaactgccaatcaagaac
ttaaaggctctaaacagccaatgggagagaagccacacccacaactccaccctgcaggtg
ttttccaccaatcagacgccttcagagcgcaatgacgatgatgtatttaaacaaacacag
aatccagacgtttccattatgacttcatccttactgccgggcgactccgggtcattgcac
atgccagcctcatattacagctgcctaaaagagacgcccgaaacctcaacgtttcagcag
attccgctgcaaatgcttccagagcgtccggacgccagcacaggctcctcacaacgccac
gtcctgataaagatgggcaacggcgtcaccaccgcccgccagcacagtttcaaccagaaa
tcagcgcatgtgggaaacatctacgagattcataggccgttaatcgcaggaggctcgtgt
ctgacccgacagcacagctacagcgagccgccacatcttcatcgggcggctattatcaga
cgaacggcgtcactcaagccgcagataccaccgaaacccacaaacataccatccaaaaca
ctacacctgccctctgctgcagggcacaccaaacacaactactga
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