Garra rufa (doctor fish): 141290422
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Entry
141290422 CDS
T11039
Symbol
usp19
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 19 isoform X1
KO
K11847
ubiquitin carboxyl-terminal hydrolase 19 [EC:
3.4.19.12
]
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
grf01002
]
141290422 (usp19)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
grf04121
]
141290422 (usp19)
Enzymes [BR:
grf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
141290422 (usp19)
Peptidases and inhibitors [BR:
grf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
141290422 (usp19)
Ubiquitin system [BR:
grf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
141290422 (usp19)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
USP19_linker
UCH_1
zf-MYND
CS
MYND_ZMYND11_ZMYD8
USP7_C2
Motif
Other DBs
NCBI-GeneID:
141290422
NCBI-ProteinID:
XP_073678639
LinkDB
All DBs
Position
18:complement(20108391..20142065)
Genome browser
AA seq
1443 aa
AA seq
DB search
MASSSTGPSESSRRRGQRGPDDALSTSRKKQKDRANQESKEAKRVTSATSSETRKDLFLD
WKQNAYEVIVRLNCEGAGVLRVEDIDYAFSDSACHIRLPDGREWSCHLHEEIEASCSKLL
YKEKTNLLQLVMHKRIPLNTWPTFASKKKTEKVNILRENGSNHHQSTTAQSEKSVEIIEK
TPAVTSAEQKRGKPDRGLKRGMKGKQVEPTESTGVKVAEIKSTDKADPINEPSAKRTTRP
SRSTKEPPVAPCSTKESQSKPAVNGKTHALPVSSSASSTSTAKDNRVQMQVKDQESQAPP
KEKEVDKRPKSNDQVEVDESKTVSSVCEKVVQQESSPLVKTHTEKIPSDEKENRKDEKKP
QADAQIAKMLPSRDLVSEGPVSTASKREESPRKICSEEKRDKSKEDPHGGSQEEDTAGPE
PMVNLKLVKNDSYEKGTDLMVVNVYMKEICRQTSRVLFREQDFTLIFQTSDPNFLRLHPD
CGPNTVFKWQVKLRNLIQPDQSSYAFTPSRIDITLKKRHSQRWGGLEAPATQGAVGGAKV
AVPSSPSTLEKSQPGSSQHALPAKEEPRVGEEKAKPPRAPEDSGLDAVAPRSVSEHMSLK
QEPAVVTPKPTCMVQPMTHTSPAGSERAEEVEEKKVCLPGFTGLVNLGNTCFMNSVIQSL
SNTRELRDYFHDRGFESEINCNNPLGTGGRLAISFAVLLRALWKGTHHAFQPSKLKAIVA
SKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTETVDSDGRQDEVVAEEAWQRHK
MRNDSFIVDLFQGQYKSKLVCPVCSKVSITFDPFLYLPVPLPQKQKVLTVFYFAKDPHKK
PVKFLVSVSKENSSTTEVLESISRNVRNKPENLRLTEVVKNRFHRIFSPSQSLDTVTSSD
LLFCFEVLSKDHAKERVVLLKVQQRPQVPSIPITKCAGCMKPPASDDEKLKRCTRCYRVG
YCNQACQKNHWPNHKTTCRPNVENIGLPFLISVPESRLTYTRLTQLLEGYSRYSVNVFQP
PYQSGRTSPEASLSRVDLTSMASSVSECQEPEEEPSSAAEAESQAEQGDSGTDPQTETAS
MISAAGGDTLSSDSGCCELATSSQDSLVEKETSCEKAVKPEAVVTGYQQPSESATGGASQ
FYITVLDSSQKEDGKLEDKGDAVLEVPDDCTLELVWKNNERQKEYVLVRSKELEFDEDPG
SATETSRAGHFTLEQCLNLFTKPEVLAPEEAWYCPKCQQHREASKQLLLWRLPNVLIIQL
KRFSFRSFIWRDKINDMVDFPVRNLDLSKFCIGHKGDIQQPPIYDLYAVINHYGGMIGGH
YTAYARLPSDKNSQRSDVGWRLFDDSTVTTVEESQVVTRYAYVLFYRRRNSPVERPSHLL
GPLGAESSAATGGAASQASSQTLFGTDLDPDGPPQLSTEVTSDMFAHSGECAAPSYSSME
EVD
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atggccagcagcagtacaggacccagcgaatcgagccggaggcgaggtcaaagaggacct
gacgatgcgttgagcaccagtaggaagaaacagaaggacagagccaaccaggagagcaag
gaggccaagcgggtcacctcagccaccagctcagaaactagaaaagatttgtttctggac
tggaagcagaatgcttacgaggtgatagtgaggctgaactgtgaaggtgctggggtgctg
agagtggaggatatcgattatgcgttttccgattccgcctgccacatccgcttgccggat
ggccgggaatggagctgtcatctccatgaagagattgaagcttcttgcagcaaacttctt
tataaggagaaaacaaatcttctgcagcttgtcatgcacaagaggatccccctcaacaca
tggcccacctttgctagcaagaaaaagacagaaaaggtgaatatccttagagagaatggc
agcaaccaccaccagtcaaccactgcgcagtcagaaaaatctgtcgaaatcattgagaaa
acgcccgcagtgacctctgctgagcagaaacgaggtaaacctgaccgagggttgaaacgt
gggatgaaaggcaaacaagtggaacccaccgagagcacaggtgtgaaggtagctgagatt
aaatcaaccgataaagcagacccgatcaatgagcccagcgcaaagcgcaccacacgtccc
tccagaagcacaaaggagccccctgtagctccctgctcgacaaaggagtctcaatcaaaa
ccagcggttaatggaaaaacacatgcattacctgtgagcagtagtgcctcttcaactagc
actgcaaaagacaacagggttcagatgcaggtcaaagatcaagaaagccaggcaccacca
aaagagaaagaggtggacaagaggccaaaaagcaatgatcaggttgaagtagatgaaagt
aagactgtttcctcagtgtgtgagaaggtggtgcaacaggagagttctcctctagtgaaa
acgcacactgaaaaaataccatctgatgagaaagaaaacagaaaagatgaaaagaagcca
caggctgatgcccagatcgctaaaatgcttccatctcgtgatttggtatctgaagggcct
gtttcaacagcctctaagagagaggagtctcctcgaaagatctgttcagaggagaagaga
gacaagtctaaggaggatccacatggagggagccaagaggaggatacagcaggtccagag
ccgatggtgaacttgaagttagtaaagaatgactcgtatgagaaagggacagacctgatg
gttgttaacgtctacatgaaagagatctgccggcagacgtccagggtgctgttcagggaa
caagacttcactcttatcttccagaccagtgatcccaactttttgcgccttcatccggat
tgcggaccaaacactgtctttaaatggcaggttaaactcaggaatctaattcagccagat
cagtccagctacgcctttactccgtcccgtatcgacatcaccctgaagaaaagacacagt
cagcgctgggggggtctggaggcacctgccacacaaggtgcagtggggggcgccaaagtt
gctgtgccctcaagcccttccacactcgaaaagagccagccaggaagcagccagcatgca
cttcctgctaaggaagaaccacgagtgggagaggagaaagccaaaccccctcgagcccca
gaggactcgggtctggatgccgtggcccctcgctcagtctccgaacacatgtctctcaaa
caggaaccagctgttgttacgcctaagcccacgtgcatggtgcagcccatgactcacact
tctcctgcaggcagtgagagagctgaagaagtggaggagaagaaagtgtgtctccccggc
ttcactggactggtcaatctgggaaacacttgctttatgaacagtgtaatccagtccctc
tccaacacacgggagctcagagattattttcatgatcgggggtttgagtcagagataaac
tgtaataatccattgggaaccggtggacggctggctattagctttgctgttctgcttaga
gcgctgtggaagggcactcaccacgcttttcaaccctccaaattgaaggctatagttgcc
agtaaggccagtcagtttacaggctacgcgcagcacgatgctcaggagttcatggctttc
ttgctggatgggctacatgaggacctgaaccgtatccaaaacaaaccatatacagagacc
gttgactcagatggccgtcaggatgaagttgttgcagaagaggcgtggcagaggcataaa
atgaggaatgattccttcattgttgacctctttcagggccagtacaagtccaagctggtg
tgtccagtgtgttctaaggtttccataacctttgaccccttcctgtacttgcctgtcccc
ctacctcaaaagcagaaggtgctgactgttttctatttcgcaaaagatcctcacaagaaa
ccagttaagtttttggtcagtgtgagtaaagagaactcgagcacgactgaagtactggag
tcaatatctcgcaacgtgaggaacaaaccagagaacctgaggctgacagaggtggtaaag
aacaggttccacagaatcttctcaccatctcagtctttagacacagtcacatccagtgac
ctgctcttctgctttgaggtgttgtcaaaagatcatgccaaagagagagtggtgctgctg
aaggtccaacagagacctcaggttccaagcatcccaatcacaaagtgcgctggctgcatg
aagcctcctgcctctgacgacgagaagctcaagcgctgtactcgctgttaccgtgtcggc
tactgcaatcaggcctgccagaagaaccactggcccaatcacaagaccacgtgccgaccc
aatgtggagaatattggactgccgtttttaattagtgtgcctgagtctaggctgacctac
acccgcctgacacagcttctggaaggatactctaggtactctgtcaatgtgttccagcca
ccttaccagtccggtcggacgtctccagaggccagcctgtcccgtgttgacctgacctct
atggcgagcagcgtctcagagtgtcaagagccagaagaggagccatcatctgcggcagaa
gcggaaagccaagcagagcagggtgactctggcacagacccacaaacagagaccgcgtct
atgatctccgcagcaggtggagacactctctccagtgactcaggctgctgtgagcttgcc
accagctcccaagattctttggtggagaaagaaacatcatgtgaaaaggctgttaaacca
gaagctgtagtgactgggtatcagcagccgtctgagtcagcgactggaggtgcgtctcaa
ttctacatcacagttctggactccagccaaaaggaggatggaaaacttgaggacaaaggt
gatgcggtactggaggtgcctgatgactgcacgctggagctggtgtggaaaaacaacgag
cggcagaaggaatatgtgctggtgcgctctaaagagctggagtttgatgaggaccctggc
tctgctaccgagacatccagggcaggacacttcaccttagaacagtgcctgaacctcttc
accaaacctgaggtgctggcccctgaagaggcatggtattgtcctaagtgccagcaacac
agggaggcctctaaacagcttctgctttggcgtcttccgaatgtactcatcatccagctc
aagcgcttctcgtttaggagcttcatatggagggacaagattaatgatatggttgatttc
ccagtcagaaacctggacctgagtaagttctgtattggtcataagggtgacatccagcag
ccacccatctatgatctctatgctgtgatcaaccactatggcggcatgatcggaggacat
tacacagcctatgctcgtcttcccagcgacaaaaacagccagcgcagcgacgttggctgg
cgtttgtttgatgacagcacagtaacaacggtggaagagagtcaggtggttacacgttac
gcctacgtgctgttctaccgccgcaggaactctccggtagagaggccgtctcacttactg
gggccccttggcgccgaatcctctgctgcaaccggcggcgctgccagtcaggcttctagc
cagacactgtttgggacagacctggacccagacggacctcctcagttgagcacggaagtg
acttctgacatgtttgcacactctggagaatgtgccgccccatcctacagcagcatggag
gaggtggattga
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integrated database retrieval system
