Garra rufa (doctor fish): 141290434
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Entry
141290434 CDS
T11039
Symbol
slc6a1a
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1a
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
grf Garra rufa (doctor fish)
Pathway
grf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
141290434 (slc6a1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
grf02000
]
141290434 (slc6a1a)
Transporters [BR:
grf02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
141290434 (slc6a1a)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
141290434
NCBI-ProteinID:
XP_073678656
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Position
18:complement(16827285..16853375)
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AA seq
661 aa
AA seq
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MATNNTKSTDGQVVTELNEITTNDKPKAEDARTEKKKKDIPDRETWGGRFDFLLSCVGYA
IGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFFLECALGQYTSIGGLGVWKLAPM
FKGVGLAAAVLSFWLNIYYIVIIAWAIYYLYNSFTTELPWKTCNNPWNTDRCYTNYSIVD
TTNLTSAVMEFWERNMHQMTDGLEKPGEIRVPLAITLAIAWVLVYFCIWKGVSWTGKVVY
FSATYPYFMLFILFIRGVTLPGAKEGIMFYVTPDFEKLKESEVWLDAATQIFFSYGLGLG
SLIALGSYNPFNNNVYRDSIIVCCINSFTSMFAGFVIFSIVGFMAHVTKRPIADVAASGP
GLAFLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEFPRLLRKRRE
IFIACVCVVSYAIGLSNITQGGLYVFKLFDYYSASGMCLLFLVFFECISISWCYGVNKFY
DNIQEMIGYKPCLWWKLCWVFFTPLIVGGVFLFSAVQMVPLTMNNYVFPKWGQGVGWLMA
LSSMVLIPGYMGYMFLTLKGTYKERIRIMLQPPAVKRAQENGPEQQQQQTQPQQPEQSPQ
QPQSPQSPQQPQQPDQAPQQPQSPQQPQQPPQPQPQPQPQTDPQVQADSCSPSNPGNDAN
V
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaaacaacaccaaaagcaccgacggacaagttgtgacggaactcaacgagatc
acaactaacgacaaacccaaagcagaggacgccagaacagagaaaaagaagaaagacatt
ccagacagagaaacttggggtgggagatttgattttctcctgtcatgtgttggctacgcc
atcggactgggcaacgtgtggagatttccttatctgtgcgggaaaaacggcggaggggct
ttcttgattccttattttttgacgctaatttttgcgggagttcctctgttttttcttgag
tgcgctcttggacagtacacatccattggcggccttggggtttggaaactagctccaatg
ttcaaaggtgttggtcttgcggctgctgttctctcattctggctgaacatttactacatt
gtcatcattgcctgggccatatactacttatacaactcctttaccactgagcttccatgg
aaaacttgtaacaatccatggaacacagacagatgttatacaaactacagcatagtagac
accaccaatctcaccagcgctgtcatggagttttgggaacgcaatatgcatcaaatgact
gatggcttagaaaaacctggtgaaattcgtgtgccacttgcaataacactggccattgcc
tgggtcctcgtgtacttctgtatctggaaaggtgttagctggactggaaaggttgtttac
ttctctgccacctacccctacttcatgttgttcattttgtttatccgtggagtgactctg
cctggggctaaagagggaatcatgttctatgtcactcctgattttgagaagctgaaggag
tctgaggtttggctggatgctgcaacacagattttcttctcctatggtttgggtctaggc
tctcttattgctctgggcagctacaaccctttcaataacaatgtgtacagggattctatc
attgtgtgctgtataaattccttcactagtatgtttgctggatttgtgattttctctatt
gtgggcttcatggcacatgtgacaaagagaccaatagctgatgtagctgcatcaggtcct
ggtttggcatttttagcttatccagaagctgtgacgcagttgcccatctcaccactgtgg
gctattctctttttctcgatgttgctgatgctgggaatcgacagtcagttctgcacagtg
gagggcttcatcactgctctggtggatgaatttccacggctgctcaggaaaagaagagag
attttcattgcatgtgtttgcgttgtgtcctatgccattgggctgtccaatatcacacag
ggtggcctctatgtgtttaaactcttcgactattactcagccagtggaatgtgcctgctc
ttcctggtgttctttgagtgtatctcaatctcctggtgctatggtgtgaacaagttttat
gataacatccaggaaatgattggatacaagccttgtctatggtggaaactgtgctgggtt
ttcttcacccctttaattgttggtggcgtgttcctcttcagcgcggtacaaatggttcct
cttacgatgaacaactatgtgttccctaaatggggccaaggagtgggctggctcatggcg
ctgtcctctatggtcctcatacctggttatatgggctacatgttcctcaccctgaagggc
acatataaggagcggatcaggataatgctgcagcctccagcagtcaagcgtgctcaggag
aacgggcccgagcaacagcagcagcagacacagccacagcagccagagcaatcaccgcag
cagccacaatcaccgcaatcaccgcaacaaccgcagcagccagaccaagcaccacagcaa
ccacaatcaccgcaacaaccacaacaaccaccacagccacagccgcaaccacaaccgcaa
actgatccacaggtgcaggctgatagttgttctccaagtaaccctggcaatgatgccaac
gtataa
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