Garra rufa (doctor fish): 141290517
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Entry
141290517 CDS
T11039
Symbol
arfgef2
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 2 isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
grf Garra rufa (doctor fish)
Pathway
grf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141290517 (arfgef2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141290517 (arfgef2)
Membrane trafficking [BR:
grf04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
141290517 (arfgef2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
141290517
NCBI-ProteinID:
XP_073678745
LinkDB
All DBs
Position
18:complement(19240570..19290398)
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AA seq
1846 aa
AA seq
DB search
MKEQEELEIHRRHTQTETLSTKSMFLSRALEKILADKEVKRSQHSQLRKACQVALDEIKQ
ELEKQKDGTVVPPRANYIEADKYVLPFELACQSKSPRIVSTSLDCLQKLIAYGHITGNAP
DSGAPGKRLIDRLVETICNCFQGPQTDEGVQLQIIKALLTAVTSPHIEIHEGTILLTVRT
CYNIYLASRNLINQTTAKATLTQMLNVIFTRMENQAALEAQEAEKERQRLQLRNPSPVSS
NPSPVAQNPSPTPGRGSRSPWLERARSEQNGSPSPSLSPPGVPSTPSTPQDSSSINGQPE
ESKSEEEFATDKQSTKEIAHPDEEIQESDQTTSSVAGGVEGEEAHPQPETGVGTEIHDET
EPDSGLGDSSVEGGLDQHSDSETKVPPPVVRIDTQQMNGMVDDRGSESSTDILDAETMQG
SHTAARFSHILQKDAFLVFRSLCKLSMKPLADGPPDPKSHELRSKVVSLQLLLSVLQGAG
PVFRTHEMFVNAIKQYLCVALSKNGVSSVPEVFELSLAIFLTLLSHFKVHLKMQIEVFFR
EIFLTILETSSSSFEHKWMVIQTLTRICADAQCVVDIYVNYDCDLNAANIFERLVNDLSK
IAQGRSGQELGMTPLQELSLRKKGLECLVSILKCMVEWSRDMYVNPNLQANLGQERPAEG
DSADEKRHEHLSSRRDSVSSLDSTVSSGVQQSQPDHPEQYEVIKQQKDIIEHGIELFNKK
PKRGLQYLQEQGMLGTSPEDIAQFLQQEERLDTTQVGEFLGENVKFNKEVMYCYVDRLDF
CGKDFVSALRAFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFASADTAYVLAYSII
MLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSSIYDEIAGKKIALKESKEYSI
TPKSSKQTNEKQRRLLYNMEMEQMAKTAKALMEAVSHAQAPFFSATHLEHVRPMFKLAWT
PLLAAFSVGLQDCDDQDVASLCLEGIRCAIRIACIFNMQLERDAYIQALARFTLLTASSS
ITEMKQKNIDTIKTLIMVAHTDGNYLGNSWHEILRCISQLELAQLIGTGVKTRYISGVVR
DQGGSIKGFPSGGEEFMPLGLGTLVGGPDKRQMAHIQESVGETSSQSVVVAVDRIFTGST
RLDGNAIVDFVRWLCAVSMDELASAHQPRMFSLQKIVEISYYNMNRIRLQWSRIWQVIGD
HFNKVGCNPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKKNRSPTIR
DMVIRCVAQMVNSQAANIRSGWKNIFSVFHQAASDHDENIVDLAFQTTGHIVMNTFQQHF
AAAIDSFQDAVKCLSEFVCNAAFPDTSMEAIRLIRHCAKYVSDRPQALREYTSDDMNVAP
GDRVWVRGWFPILFELSCIINRCKLDVRTRGLTVMFEIMKSYGHTFEKHWWHDLFRIIFR
IFDNMKLPEQQTEKTEWMTTTCNHALYAICDVFTQFYEPLSEVLLADIFAQLQWCVKQDN
EQLARSGTNCLENLVILNGEKFNPEVWDVTCACMLDIFQTTSPHALLTWRPAGQEEEVGE
GKHMDVEFDSQSQSSFERTLSERGHSQMSTASDETWKGKSQTRVSDHRLFAGLLIKCVVQ
LELIQTIDNIVFYPATSKREDAENMAAAQRDALEQAEEGETEPDQGMYRHLSSQHLFKLL
DCLLESHKFAKDFNSNNEQRTALWRAGFKGKSKPNLLKQETSSLACSLRILFRMYSDTQL
QDSWPDIQTRLLQVCSEALAYFISLTSESHREAWTSLLLLLLTRTLRLPDDKFKPHASCY
YHHLCEMMQFDLIPELRAALRRFFLRIGSVFHIAAPELARAQPSSS
NT seq
5541 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaacaggaagagctggaaatccatcgacggcatacgcagacagaaaccctgagc
accaagagcatgtttctgtctcgggcgctggagaaaatcctcgcggataaggaggtgaag
cggagccaacacagccagctgcgcaaggcctgtcaggtggcgctggatgaaatcaagcaa
gaactggaaaagcagaaggatggcactgttgttcctcccagagccaattacattgaagct
gacaagtacgtcctgcctttcgagttggcatgtcagtccaagtctccacgtattgtcagt
acgtctctcgactgcttacagaaactcattgcgtatgggcacatcacaggaaacgcccct
gacagcggagctccaggaaaacggctgattgaccggctggtggagaccatctgtaactgc
tttcagggaccccagactgatgagggggtacagctccagatcattaaggctctgctgact
gctgtaacatcgccgcacatagagatccacgagggaacaattctcctcactgtccgcacc
tgctacaacatctacctggccagccgcaacctgatcaaccagaccacggccaaggccact
ctcacacagatgctcaatgtcatcttcacccgtatggagaaccaggcggctctggaagct
caggaagcagagaaggagagacaacgtctgcagctgcgcaatccttctccagtatccagt
aacccttcacctgtagcccaaaacccttctccaactccaggtcggggatccagatcacca
tggcttgaacgagcccgctcagaacagaatggatccccatccccctctctaagccctcct
ggggttccctccactccttccactcctcaagactcatcttctatcaatggccagccggaa
gagtcaaaatcagaggaggagtttgccacagataaacagagcacaaaggaaattgcacat
ccagatgaagagatacaggagtctgaccaaacaacttcttcagtggcaggaggtgttgag
ggagaggaggcccatccgcagcctgaaacaggagtaggcactgagattcatgatgagact
gagccagacagtggattaggagatagctctgtggaaggaggcttagatcaacattctgac
tcagaaaccaaagtgccgcccccggttgttcgaatcgacacccagcagatgaatgggatg
gtggacgaccgtggctcagagtcctccacagacattctggatgcagaaaccatgcaaggc
agtcatacagctgcccgcttttcgcacattcttcagaaagacgccttcctcgtgttccgc
tccctctgcaagctttctatgaagcccctggctgatggaccacctgacccaaagtcccat
gagttgcgatctaaggtggtttccctgcagctgctgctgtcggtgctgcaaggtgctgga
cctgtgttccgaacccatgagatgtttgtgaacgccatcaaacagtacctctgcgtggcg
ctctccaaaaacggggtctcctctgtgcctgaagtatttgagctgtctcttgccatcttc
cttaccctgctctcccacttcaaagtgcaccttaagatgcagattgaggtgtttttcagg
gagatctttctaacaatcctggagacgtcatccagctccttcgagcataagtggatggtc
atccagactctaactcgaatatgtgcagatgcacagtgtgtggttgacatttatgtaaac
tatgactgtgatctcaacgctgccaacatttttgagcgactggtaaatgacctgtctaaa
atcgcccagggaaggagtggacaggagctcggcatgactccattacaggagctgagtttg
agaaagaaagggctggagtgtctggtgtctattctgaagtgcatggtggaatggagcagg
gacatgtacgtcaaccccaacctgcaggccaaccttggtcaggaacgtccagcagagggc
gacagtgcagatgagaagcgccacgagcatctttcctctcgcagagatagtgtgagctct
ctggactccactgtgtcatctggagttcagcagtctcagccagatcaccccgagcagtat
gaggtcatcaagcagcagaaagacatcatcgagcatggcattgagctatttaacaagaaa
ccaaaaaggggattgcaatacctgcaggagcaaggcatgctgggcacctcaccagaagat
attgcacagttcctgcaacaggaagagcgattggacacgactcaggttggcgagttcctg
ggagagaatgtgaagtttaataaagaggtgatgtactgctacgttgaccggctggacttt
tgtggcaaagactttgtgtcggcgctccgtgccttcttggagggcttcaggcttccaggt
gaagcccagaaaattgatagactcatggagaagtttgctgctcggtacctggagtgcaat
caggggcagactctgtttgccagcgcagacacagcttacgttctggcctactccatcatc
atgttaaccaccgacctgcacagtccacaggtaaagaacaaaatgacaaaggagcagtac
ataaaaatgaaccgtggcattaatgacagtaaggacctgccagaagagtatctctcctcc
atctacgatgaaattgcaggcaaaaagattgccttgaaggagagcaaagaatactccatc
actcccaaatccagtaaacagactaatgagaagcagagaaggctgctgtataacatggag
atggagcagatggccaaaacagctaaagctctgatggaggctgtaagtcacgctcaggct
cccttcttcagtgccactcacctagagcacgtccggcccatgttcaagctggcctggact
cctctgttggcggctttcagtgtaggactccaagattgtgatgatcaggatgtggcatct
ctctgtctggaggggatccgatgtgctatcaggatcgcctgcatcttcaacatgcagttg
gagagagatgcctacatccaggccttggcccggtttacactgcttaccgccagctcaagt
atcacagagatgaagcagaagaacattgacaccataaagactctcatcatggttgcccac
acagatggaaactacttgggcaactcctggcatgagattctgaggtgtatcagtcagctg
gagttggcccagttgattgggacaggggtgaagacgcgttatatctccggtgtggttcgg
gaccagggaggcagcataaagggcttcccgtcagggggagaagaattcatgcccctcggc
ttaggtactctggttggaggtccagacaagcgtcagatggctcatatccaggagtcagtg
ggggagaccagctctcagagtgttgtggtggctgtggacagaatcttcactggatccacc
aggcttgatggaaatgcaattgtggactttgtgcgttggctctgtgcggtctccatggat
gagctggcctctgctcaccagccgcgcatgttcagtctgcagaaaatagtggagatctcc
tactacaacatgaaccgcatccgattgcagtggtcacgcatttggcaggtcatcggagat
cactttaacaaggtgggttgtaatcctaatgaggatgtggccatctttgctgtggactcc
ctgagacaactttctatgaagtttctggagaaaggagaactggccaatttccgcttccag
aaggactttttaaggccatttgaacacatcatgaagaagaacaggtcgcccactatccgg
gacatggtgatacgttgtgtggcccagatggtgaactcccaggctgctaatattcgttct
ggctggaagaacatcttctctgtgttccatcaagctgcatcagatcatgatgagaacatt
gtggaccttgcgtttcaaaccacaggacacattgttatgaatacattccagcagcatttt
gccgcagccattgactctttccaggatgcagttaagtgtttgtcagagtttgtatgtaat
gctgcatttcctgacaccagtatggaagccattcgtctcatccgccactgcgctaaatac
gtatctgacaggccgcaggcactaagggaatacactagtgatgacatgaatgtggcccct
ggtgaccgcgtttgggtgcgaggctggttccccatcctgtttgagctttcctgcatcatc
aaccgctgcaaactagacgtcaggaccaggggtctgactgtcatgtttgagatcatgaag
agttacggacacacctttgagaagcattggtggcatgatctctttcggatcatcttcaga
atttttgacaacatgaagctccctgagcagcaaactgaaaaaacagaatggatgacgacg
acatgtaaccacgccctctacgctatctgtgacgtgttcacgcaattctacgagcctctc
agcgaggtgctgctggcggatatttttgctcagctgcagtggtgtgtgaaacaagataat
gagcagctggcacggtcaggcacaaactgtctggagaacctggtgatcctgaacggggaa
aagttcaatccggaggtgtgggacgtcacctgcgcctgcatgctggatatcttccagaca
accagccctcatgccttgctgacatggcgaccagctggacaggaagaggaggtgggagaa
gggaaacacatggatgttgagtttgattctcagtcgcagagcagctttgagagaactctt
tcagagagaggacacagtcagatgtccaccgccagtgatgaaacctggaaagggaagtcg
caaaccagggtctcagaccacaggctgtttgcagggctgcttataaagtgcgtcgtacag
ctagagttgattcagaccatagacaacattgtattctacccggctaccagcaagagggag
gatgctgagaatatggctgctgctcagcgagatgcacttgagcaagcagaagagggagag
acggagcctgatcagggcatgtacagacacctgtcgtcacagcacctcttcaaactgctt
gactgcctgcttgagtcccacaagtttgccaaggactttaactcgaacaatgagcagagg
acagcgctctggagagcaggctttaaggggaagtcaaaaccgaatcttctgaagcaggag
accagcagtctggcctgcagtctgaggatcctctttcgcatgtactccgacacgcagctg
caagactcctggccagacatccagacacgcctgctgcaggtgtgtagtgaagccctggct
tacttcatcagtcttacctcagaaagccaccgggaagcctggacgagcctcctgctactg
ctcctcacacggacactcagactgcctgatgacaaattcaagcctcatgcctcctgctac
taccaccatctgtgtgagatgatgcagttcgacctcattccggagcttcgcgctgctttg
cggcgatttttccttcgcattggttccgtcttccacatcgctgctcccgaattggccaga
gcgcagccttcatcatcataa
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