Garra rufa (doctor fish): 141290746
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Entry
141290746 CDS
T11039
Symbol
uba1
Name
(RefSeq) ubiquitin-like modifier-activating enzyme 1
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
141290746 (uba1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
grf04121
]
141290746 (uba1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
grf04147
]
141290746 (uba1)
Enzymes [BR:
grf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
141290746 (uba1)
Ubiquitin system [BR:
grf04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
141290746 (uba1)
Exosome [BR:
grf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
141290746 (uba1)
Exosomal proteins of other body fluids (saliva and urine)
141290746 (uba1)
Exosomal proteins of colorectal cancer cells
141290746 (uba1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA_E1_SCCH
ThiF
E1_UFD
E1_FCCH
E1_4HB
BilD_C
DUF7243
Viral_DNA_Zn_bi
Motif
Other DBs
NCBI-GeneID:
141290746
NCBI-ProteinID:
XP_073678946
LinkDB
All DBs
Position
18:20523946..20548803
Genome browser
AA seq
1058 aa
AA seq
DB search
MSSSPLSKKRRVSGSETKTGSHCSSSNSVRTELSHTPANGMAKNGNDAEIDEGLYSRQLY
VLGHDAMKRMQSSNVLISGLRGLGVEIAKNVILGGVKSVTLHDQGVAEWKDLSSQFYLRE
EDLGKNRADVSQLRLAELNSYVPVTSYTGTLTNDYLTKFQVVVLTNSSLDEQTRIGDICH
SNGIKLIVAETRGLFGQLFCDFGEEMTVFDTNGEQPLSAMISMITKDGAGVVTCLDEARH
GFESGDYVTFTEVQGMTELNGCEPVEIKTLGPYTFSICDTSSFSDYVRGGIVTQVKMPKT
VAFKSLSSSMAEPEFMLTDFAKFDRPGQLHVGFQALHGFEKKHSRLPKPWSQSDADELMA
LAEEVNAAHTGSAKQEQLDQALIKKLSCVAAGDLAPINAFIGGLAAQEVMKACTGKFMPI
MQWLYFDALECLSEAEDAILTEEECAPRNCRYDGQIAVFGSKLQELLARQRYFLVGAGAI
GCELLKNFAMMGLASGEGEVIVTDMDTIEKSNLNRQFLFRPWDVTKMKSETAAAAVKQMN
PSVRITGHQNRVGPDTEKVYDDDFFESLNGVANALDNVDARMYMDRRCVYYRKPLLESGT
LGTKGNVQVVIPFLTESYSSSQDPPEKSIPICTLKNFPNAIEHTLQWARDEFEGLFKQPA
ENALQYLTDQKFMERTLKLPGAQPLEVVEAVYKSLVTDCPRGWEDCVAWARNHWQCQYNN
NIRQLLHNFPPDQLTSSGAPFWSGPKRCPHPLEFSTNNDLHMDYIMAAANLFAQSYGLPG
SSDRSSLTKLLQDIKVPEFTPKSGVKIHVSDQELQSANASIDDSRLEELKTQLPSTEATS
QFKLCPIEFEKDDDTNFHMDFIVAASNLRAENYDIPPADRHKSKLIAGKIIPAIATTTAA
VVGLVCLELLKIVQGHKKLESYKNGFMNLALPFFAFSEPIAAPKHKYYEIDWTLWDRFEV
KGIQSNGEEMTLRQFLDYFKNEHKLEITMLSQGVSMLYSFFMPAAKLKERLDLPMTEIVT
KVSKKKLGKHVKALVFELCCNDDTEEDVEVPYVRYTIR
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgtccagctcgccgctgtccaagaagcgtcgcgtgtcaggatcagagacgaagacggga
tcccattgctcctcctctaactctgtcagaaccgaactgtcacacacaccagctaacggc
atggctaagaatggaaatgatgctgagatcgacgagggcttgtactccagacagctgtac
gtgctgggccatgatgctatgaagcgcatgcagagctccaatgttctgatctcaggactg
cgaggtttgggtgtagagatagccaagaatgtcattctgggtggagtcaagagcgtcacc
ctgcatgaccagggtgtggctgagtggaaagacctttcatcacagttttacctgcgtgag
gaggatcttggaaagaaccgtgcagatgtcagtcagcttcgcctggcagaactcaacagc
tatgtgcctgtaacctcctacactggtaccctcaccaacgattacctgaccaagtttcag
gttgttgtgctcaccaactccagcctcgatgagcagacacgcatcggtgacatctgccat
agtaatggcattaagttgatcgtggcagagacgcgtgggctgtttgggcaactgttctgc
gattttggggaggaaatgactgtgtttgacaccaatggagagcagccactgagcgccatg
atctcaatgatcacaaaggacggtgctggtgtggttacatgtctggatgaagcacggcat
ggatttgagagcggagattatgttactttcacagaagtgcagggcatgacagagctcaac
ggctgtgaaccagtagagattaagacactgggtccttacaccttcagcatctgtgacacc
agctcattctcagactatgtgagaggtggtattgtcacacaagtgaagatgcccaagaca
gttgcctttaaatccctgtcctcttccatggccgaaccagagttcatgctgactgatttt
gccaaatttgatcgtccaggccaactgcacgtgggctttcaggcactgcatggatttgag
aagaagcacagtcgtctaccgaagccctggagtcagtctgatgcggacgaacttatggct
ctggctgaagaggtgaatgctgcgcacaccggatctgccaagcaagagcaactggaccag
gcactcatcaaaaaactgtcctgcgtggctgctggagacctggcacccatcaatgccttt
attggtgggcttgctgcccaggaggttatgaaggcttgcaccgggaagtttatgcccatc
atgcaatggttgtattttgacgctctggagtgcttgtctgaggctgaggatgccattctg
accgaggaagagtgtgcacctaggaactgccggtatgatggccagattgctgtttttggg
tccaagctgcaggagctgttggccagacagcgatattttctggttggtgctggagccatt
ggttgtgagctgctgaaaaactttgctatgatgggcttggccagcggtgaaggagaggtc
atagttactgacatggacaccatagaaaagtccaatctcaatcgacagttcctctttagg
ccgtgggacgttacgaagatgaagagcgagaccgccgctgcagccgtgaagcagatgaac
ccatcagttcgcatcacaggacatcagaaccgtgtagggcctgacactgagaaggtctat
gatgatgatttctttgaaagcctcaatggagtggcaaatgctcttgacaatgtagatgcc
cgtatgtatatggaccgaaggtgtgtgtactaccgtaagccattgctggagtctggtact
ctaggaactaaagggaacgtgcaggtggtcattcccttcctcacagagtcatacagctcc
agccaggatcctccagagaagtccattcccatctgcactctcaaaaacttcccaaatgca
atcgaacacacccttcagtgggctcgtgatgagtttgagggacttttcaaacagcctgct
gaaaatgccttgcagtatctgacagaccaaaagtttatggagcgcacactgaagctccct
ggggctcagccattggaggtggtggaggcagtatacaaaagcctggtgacagattgccca
cgaggctgggaggactgtgtagcttgggctcgcaaccactggcagtgtcaatataacaac
aacatccgtcagctactgcacaatttccctccagaccagcttacaagttctggggcaccg
ttctggtcaggtccaaaaagatgtcctcatccattagaattcagcactaacaatgatctt
cacatggactacattatggcagcggctaacttgtttgcccagtcatatggcctgccgggc
tcctctgaccgctcttctctgactaagctgctgcaggatattaaagtgcctgagttcaca
cccaaatcaggagtcaagatccacgtgtccgatcaggagctgcagagtgccaatgcttca
atcgatgactctaggcttgaagaactgaagacacagttgccttctacagaagcgacttct
caattcaagctctgtcccattgaatttgaaaaggacgatgacacaaacttccacatggac
ttcattgtagcagcgtctaatctaagagcagagaattacgacattcctcctgcagataga
cacaagagcaaactcattgctggaaaaatcattccagcaatcgccacaacgacagctgct
gtggtgggtctggtgtgtctggagctgctgaagatcgttcaggggcataagaagctcgag
tcctacaagaacggcttcatgaaccttgctctgcctttcttcgccttctctgagcccata
gctgcccccaagcacaagtactatgagattgattggacgctttgggaccgctttgaggtg
aagggcattcagtccaatggtgaagaaatgacactccgacagttcttggactatttcaag
aatgaacacaaactggagatcactatgctctctcagggagtttccatgctctactctttc
ttcatgcctgcggccaagctcaaagaaaggctggacctaccgatgactgagatcgtgact
aaggtgtccaagaagaaactggggaagcatgttaaagcactagtttttgagctctgctgc
aatgacgacacagaagaggatgtagaggtcccctacgtcagatacaccatccgctga
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