Garra rufa (doctor fish): 141290808
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Entry
141290808 CDS
T11039
Symbol
nfatc2a
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 2
KO
K17332
nuclear factor of activated T-cells, cytoplasmic 2
Organism
grf Garra rufa (doctor fish)
Pathway
grf04020
Calcium signaling pathway
grf04148
Efferocytosis
grf04218
Cellular senescence
grf04310
Wnt signaling pathway
grf04370
VEGF signaling pathway
grf04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
141290808 (nfatc2a)
04370 VEGF signaling pathway
141290808 (nfatc2a)
04020 Calcium signaling pathway
141290808 (nfatc2a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
141290808 (nfatc2a)
09143 Cell growth and death
04218 Cellular senescence
141290808 (nfatc2a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
141290808 (nfatc2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141290808 (nfatc2a)
Transcription factors [BR:
grf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
141290808 (nfatc2a)
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Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
141290808
NCBI-ProteinID:
XP_073679037
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Position
18:complement(36412825..36461663)
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AA seq
897 aa
AA seq
DB search
MSSFYGDKAALGLAEELSQVHCQDELEFDYLFEYGSTTGLQDDQSISSHKDLISPPSLSY
PVEEAQAYGIKPCAASFAELSAEGLSGYEQLEPRVFPDSARPNSQALSPRIEITPSREHY
NHGRDSIQNHLINTSPSPGLTVPGHDPLAYREPQCLSPASSNSSTSWHSENLSPWASPCV
SPSNSQAAGELCPRLQGVHTGSPRTSPGTSPRTSLAEDGFVGPRSPSPRPGSRSTSPLCK
RTYDMYRNLVPVARSRSPSPHGGHEEHHAPHYGSNNISGVMNGFGAAQANSIPTKIVKTN
QQAYPLYPENHTESYLVSCDQDMKSKPGPEPFFVIPQIWPKQLVPGICSIPVASLPPLEW
PLPSRTDQYELHIEVQPKPHHRAHYETEGSRGAVKAPTGGHPVVQLRGYRGKEPLGLQIF
IGTADERILKPHAFYQVHRITGKTVTTTSYEKIIHSTKVLEIPLEPKNNMKAIIDCAGIL
KLRNADIELRKGETDIGRKNTRVRLVFRVHIPQQGGQHVSLQIASHPIECSQRSAHELPM
VEKQDMDACSVLGGQQMILTGQNFSADSKVIFMEKTHDGQQIWELEATVDKDKSQASLLF
IEVPPYRDPSICHPAKVNFYVINGKRKRSQPQHFTYMPLPVPSIKTEPVDEYESGRMGYS
MVSPQQYYNPRGVITPESGLVPGLVPCQQTRLGVSPPDHRFQQQSPAIMYSRPGKSLSSS
PIYSQTGATMIPDSHRSVLVHTGSPAQSSHLAGQHPSNQHSSIIQFSPTNHHLLRGGGDP
PAPPPPEHQHIIYCEGYNQHGPPAPGANRSPAPAQAPQHPQNYPTVIQQQPFLQRVAKDR
SPPIQVEPQRCSSAEEQRTSAPGRVTVKQENLDQAYLDDVNEIIRKDLTGVPGRGQT
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgagctctttttacggcgataaggctgcgttaggactggccgaggagctcagtcaggtg
cactgtcaggatgagctggagtttgactatctctttgagtatggatccacaacggggctt
caagatgaccaaagcatctcctcgcacaaagacctcatctctcctcccagcctctcctat
cctgtggaggaagctcaggcgtacggcatcaagccgtgtgcggcttccttcgccgagctc
agcgccgaaggtctctcaggctacgagcaactggagccgagagttttcccggatagtgcc
agacccaacagccaggccctgagcccacgaattgagatcacgccctcccgcgagcactat
aaccatggtcgagactcgatccagaaccatctcataaacaccagccccagtcccggtctc
accgtgcctggccacgaccctttggcctaccgggagccgcagtgcctgagtcctgccagc
agcaactcgtccacctcctggcactcggagaacctctcgccctgggcttccccttgtgtt
tcgcccagcaacagccaagcggctggagaactttgcccacggctccagggcgtccacacg
ggttcccctcgaaccagtccgggcacttctccgcgaaccagcctggccgaggacggcttc
gtggggccgcgctctccttcgccccggcccggctcacgttccacctcccctctatgcaaa
cgcacctacgacatgtacaggaatctggtgccggtggcccgttcgcgcagcccgtcaccc
cacggtggccacgaggagcatcacgccccacattatggctccaacaacatctctggggtc
atgaatggcttcggcgctgcccaagcaaattccattcctaccaaaatcgtgaagaccaac
cagcaggcctacccgctttaccctgagaaccacactgagagttacctggtgtcgtgtgac
caggatatgaagtccaaacctggccctgaaccgttcttcgtaatccctcaaatctggcct
aaacagctggtgcctggaatatgcagcatccccgtggcctccctgcccccgctggagtgg
cctctgcccagccgcaccgatcagtacgagctccacatcgaggtgcagcccaaaccgcac
cacagggctcactacgagaccgagggcagccgtggggcggtcaaagcccctactggagga
cacccggtggtccagttacgtggatacagaggcaaggagccgctgggtttgcagatcttc
attggcacggcagacgagcgaatcctaaagcctcacgctttctatcaagtccatcgcatt
accggcaaaaccgtcaccaccaccagctacgagaagatcatccacagcaccaaagtcctg
gagattcctcttgagccaaagaataacatgaaagcaataattgattgcgctggtattctc
aagcttcgcaatgcagacatcgagctgcgaaaaggagagacggacatcgggcgaaaaaac
acacgtgttcgactggttttccgtgttcatattccccagcaaggaggccaacatgtgtct
ctgcaaattgcttcgcatcccatcgaatgctcccagagatctgcccacgagctgcccatg
gtagaaaagcaagacatggacgcctgttcggttcttggaggccagcagatgattctcacc
ggccagaacttcagcgcagattcaaaagtgatcttcatggagaagactcacgatggacag
caaatttgggaattggaagccacagttgacaaagacaaaagtcaggcgagcttgctattc
attgaggtacctccatatagagacccatccatttgccatcctgccaaagtcaacttctac
gtaataaatgggaaacgaaagcgcagtcaaccgcagcattttacctacatgcctctacca
gtcccctctattaagacggagccagtagatgaatatgaatctggtcggatgggttattcc
atggtgtctccccaacagtattataaccctcgtggtgtcatcaccccagaaagtggcctg
gtgcctggcctcgtcccttgtcagcagactcgcctgggcgtttcccctccggaccacaga
tttcagcagcagagcccagccattatgtactcccgtcctggaaagagcttgtcaagcagt
cctatttactctcagacgggggccactatgattccagactcccatcgatcagttctggtc
cacacaggttccccagcccagtcctcacacctagctggccagcatccttctaaccagcat
tcctcaatcatccagttttctcccaccaaccaccacctgctcagaggaggaggagatcct
cccgcgccaccacccccagaacatcaacacatcatttattgtgagggctacaatcagcat
ggtcctccagccccaggggcaaaccgttcaccagcaccagcccaggcacctcagcaccct
caaaattaccccacggtcatccaacaacagcccttcctccagagagtggccaaagacagg
tcacctcccatccaagtagagccccagagatgctcctcagcggaagaacagagaaccagc
gctcctggacgagtcacagtcaagcaggagaacttggaccaagcctatcttgatgatgtg
aacgagatcataaggaaggatctgacaggagtgcctggcaggggtcagacatag
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