Garra rufa (doctor fish): 141290858
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Entry
141290858 CDS
T11039
Symbol
scube3
Name
(RefSeq) signal peptide, CUB and EGF-like domain-containing protein 3
KO
K24468
signal peptide, CUB and EGF-like domain-containing protein 1/3
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
grf04990
]
141290858 (scube3)
Domain-containing proteins not elsewhere classified [BR:
grf04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
141290858 (scube3)
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Ortholog
Paralog
GFIT
Motif
Pfam:
FXa_inhibition
cEGF
EGF_CA
Ephrin_rec_like
EGF_3
CUB
EGF
TNFR_ELAPOR1_6th
hEGF
EGF_MSP1_1
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
141290858
NCBI-ProteinID:
XP_073679095
LinkDB
All DBs
Position
18:38156711..38326383
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AA seq
1001 aa
AA seq
DB search
MMFMHVLMRAGFGLFSVALIAFVQQPAGAFASRNPQDVDECAEALDSCSMDAICQNTLKS
YKCICKSGYKGDGKHCEDIDECASEYNGGCVHECINIPGNYRCTCYDGFRLANDGHNCLD
VDECAEGNGGCQQVCVNMMGSYECRCRDGFLLSDNQHTCIQRPKVRFNGTKDVPTCMDKN
HGCAHICRETPKGSIACECRPGFQLTKNNRDCKLTCNYGNGGCQHICEEMDHGPRCSCHM
KFALHSDGKTCVETCAVNNGGCDSTCHDAVTGVRCSCPVGFTLQPDRKTCKDIDECRMNN
GGCDHVCRNTVGSFECSCKKGYKLLTNERTCQDIDECSFDRACDHTCVNSPGSFQCYCHK
GYVIYGVAHCGDIDECSINRGGCKFGCVNTLGSYECTCPPGYKLHWNKKDCVEIVKCTSN
LVAPKATLTCNKMGKKESCSLTCASKAHYLSESDNSYSVSCGIPILRGKSQSRLNASSIQ
SCVETQAPPVKQTVSFRIKNAKCHLHPKHKGRAEDNGRQIGPGGQPCNICMVTFVNLKCD
SSKKAKGRRARNPSNKEVTRITLELEAEVKPGDATGNCNMMCQRQRMEQQMKSYIKALKK
SINQERFLIRVAGLEYEVAQKLPQAALRQENCGPGREKDSGRCVRCLPGSYYHGEQERCV
QCPPGTFQEREGQLACDLCPGGDRHGPLGARNITSCAGQCPPGYFSGDGFKPCQPCPLGT
YQPDPGRTLCFPCGGGLGTKREGASSFNDCEVKVLCSPGHYYNTSVHRCIRCPHGTYQAE
FRQNYCISCPGNTTTDFDGAISVSQCKNRECGGEIGEFIGYIESPNYPGNYPANVECIWT
INPPHKRKILIVVPEIFLPSEDECGDVLVMRKNGSATSITTYETCQTYERPIAFTARSRR
LWINFKSNDVNSARGFQIPYVTYDEDYEQLVEDIVRDGRLYASENHQEILKDKKLIKTLF
DVLAHPNNYYKYSTRDSTEMLPRSFIRLIHSKVSAFLRPYK
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcatgcatgtcctgatgcgcgctggctttggattattcagcgtcgctctgatc
gcctttgtccagcagccagccggcgcttttgccagcagaaacccgcaagatgtggacgag
tgcgccgaggccctggacagctgcagtatggatgccatctgtcagaacaccctcaagtca
tacaaatgcatctgcaaatcaggatacaagggcgacgggaaacactgtgaagatatcgat
gagtgtgccagtgaatacaacgggggatgcgttcacgagtgcatcaacatccccggaaac
tacagatgcacgtgctacgacggatttcgcttggccaacgacggacacaactgcctggat
gtggatgagtgcgcggaaggaaacggcggatgccagcaggtctgtgttaacatgatgggg
agttacgagtgtcggtgccgtgacggatttctcctgtccgacaaccagcacacctgcatc
cagagacccaaagtgcgttttaatggaactaaagacgtgcccacctgcatggataaaaat
cacggctgtgcccacatttgccgagagacgcccaaaggaagcatcgcctgtgagtgcaga
cctggatttcagctcaccaagaacaaccgagactgtaaattgacgtgtaactatggtaac
ggcggctgtcagcacatctgtgaggagatggaccacggacccaggtgttcatgtcacatg
aagtttgcgcttcactctgatgggaagacctgtgtagagacgtgtgcggttaataacgga
ggctgcgacagcacatgtcatgacgccgtgactggagttcgttgcagctgccccgtggga
ttcaccttacagccagaccgcaagacctgcaaagacattgacgaatgccgcatgaacaac
ggcgggtgtgaccatgtgtgcagaaacacggtcggcagcttcgaatgcagctgcaagaaa
ggatacaaacttctgaccaatgagaggacgtgccaagatatcgatgagtgttcattcgac
cgggcgtgtgaccacacatgtgtgaactcaccaggaagtttccagtgctactgccacaaa
ggttatgtcatctacggcgtggctcactgcggagatatcgacgagtgcagcattaatcgg
ggtggctgtaaattcggatgcgtgaacactttgggcagttacgagtgtacctgccctcct
ggttacaaactgcactggaacaagaaggactgcgtcgagatcgtgaagtgtacgtccaat
ctggtggcccccaaagccacccttacttgcaataagatggggaagaaagagagctgctct
ctcacatgtgcatccaaagcacattacctgtcagaatcagacaacagctattcggttagc
tgtggaatacccatcctacgaggcaaatctcagagcagactgaatgcaagcagtatccag
agctgcgtagagactcaggctcctccagtgaagcagacggtgtcctttcggatcaagaac
gccaaatgccacctgcacccgaagcataaggggagagccgaggacaacggcagacagatc
gggccaggtggccaaccgtgcaacatctgcatggtcacgttcgttaacctgaagtgcgac
tcatctaagaaagccaaaggtcgtcgggcacgtaacccatcgaacaaagaggttacacgc
atcactctggagctggaggctgaggtcaagccaggagacgccactgggaactgtaacatg
atgtgtcaaaggcagcgcatggagcagcagatgaagtcgtacattaaagccctgaaaaaa
tccattaaccaggagcgtttcctcatccgtgtggctggattggagtacgaggtggcgcaa
aagctcccacaagcagcactaaggcaggagaactgcggacctggccgagaaaaagacagc
ggccgctgtgtcagatgtttgcctgggtcatactaccatggtgagcaggaacgctgcgtc
cagtgcccacctggaacattccaggaacgtgaaggtcagctggcctgtgacctttgtcct
ggaggagaccgccacggcccactaggggcccgcaatatcacatcatgtgcaggtcaatgt
ccaccaggttatttctccggcgatgggttcaagccctgtcagccatgccccctgggaaca
taccagcccgaccctggacgaacactctgtttcccctgtggaggtggactcggtactaaa
agagagggtgccagctcttttaacgactgtgaagtcaaagtgttatgttctccaggtcat
tattataacacgtcagttcaccgttgcatccgctgtcctcatggaacataccaggctgaa
ttcagacaaaactactgcatctcctgtccaggaaacaccaccacagactttgatggggcc
atcagtgtctctcaatgcaagaatcgggaatgtgggggtgaaataggcgagttcatcgga
tacatcgagtcccccaactatccaggaaactatccagccaacgtagagtgtatctggacg
atcaaccctccacacaaacgcaagattctgatcgtagttccggagatcttcctcccatct
gaggacgagtgcggagatgtcctagtaatgaggaagaatggttcagcgacctctatcacc
acctatgaaacttgtcagacgtatgagaggccgatcgcatttactgcccgatcgcgccgc
ctctggatcaacttcaaatccaatgatgtaaacagcgcgcgtggattccagattccatat
gtcacttacgatgaagactatgagcagctggtcgaagacattgtaagagatggaagactt
tatgcctctgaaaaccatcaagaaatacttaaggacaaaaaactgattaaaactctgttc
gacgtgctggctcacccaaacaattactacaagtactcaactcgggactccacagagatg
ctcccgcgttcgttcatccgcctcatccacagcaaagtctccgccttcctgcgtccatac
aaatag
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