Garra rufa (doctor fish): 141290861
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Entry
141290861 CDS
T11039
Symbol
hnrnpa1b
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1b isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
grf Garra rufa (doctor fish)
Pathway
grf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141290861 (hnrnpa1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grf03019
]
141290861 (hnrnpa1b)
03041 Spliceosome [BR:
grf03041
]
141290861 (hnrnpa1b)
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
141290861 (hnrnpa1b)
mRNA cycle factors
Common to processing body (P body) and stress granule
141290861 (hnrnpa1b)
Spliceosome [BR:
grf03041
]
Common components
Common spliceosomal components
hnRNP proteins
141290861 (hnrnpa1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
141290861
NCBI-ProteinID:
XP_073679099
LinkDB
All DBs
Position
18:complement(33372773..33377098)
Genome browser
AA seq
388 aa
AA seq
DB search
MSKEGQPREPEQLRKLFIGGLSFETTDDSLRAHFEQWGTLTDCVVMKDPNTKRSRGFGFV
TYSSVSEVDASMDARPHKVDGRLVEPKRAVSREDSNKPFAHTTVKKIFVGGIKDDTEENH
LRDYFNGFGKIEAIEIMVDHKTGNKRGFAFVTFDDHDSVDRIVIQKYHTVNGHNCEVRKA
LSKQEMQNTGMNRGRGGGGGGGGGNFNRYGNNGGYNNDFGGSGGGGNRDGYFGRGGRGGG
GGGGGYGGDCYNNGFGGGDGGYGGGPGNYGGNRGYGGGSGGGGHGYGNQGSGGYGGGGNS
GGGGGYNDNYNNGNGNFGGGNFGGGGGGGGGNYSDFGNYSNQQSNYGPMKGNFGGGGGGG
GRNSGPYGGGYGGGSGGGYGGGSGGRRF
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagagggccaaccacgtgagccagagcagctgcggaagctcttcattggaggg
ctcagctttgaaaccacagacgatagtttgcgggcgcattttgaacaatggggcacctta
acggattgtgtggtgatgaaagatccaaacaccaaacgctccaggggctttgggtttgtc
acttattccagcgtgtctgaagtcgatgcctccatggatgcacgtccccacaaggtcgac
ggcaggctcgtggagcccaaacgagctgtttctcgagaggactccaacaagccgtttgct
cacacaactgtgaagaagatctttgtgggtggcattaaggatgacacagaggagaaccat
cttcgtgactacttcaacgggtttggcaaaatcgaggccattgagataatggttgaccac
aagaccggaaacaaaaggggctttgcctttgttacgttcgatgaccatgactccgttgac
cgtatcgtcattcaaaaataccacactgtgaatgggcacaactgtgaagtcagaaaagcc
ctgtctaaacaagagatgcagaacactggtatgaacagaggccgtggtggtggtggagga
ggaggtggtggaaacttcaacagatatggcaacaacggtggctacaacaatgactttgga
ggcagcggtggtggcggcaaccgcgacggctattttggaagaggaggccgaggtggtgga
ggcggcggaggtggttatggtggtgactgctacaacaacggatttggtggcggagatggt
ggttatggcggtggtcctggtaattatggtggaaaccgtggatatggaggaggtagcgga
gggggtggacatggttatggcaaccagggcagcggcggttatggtggcggtggcaacagc
ggtggtggtggcggctataatgacaactacaacaatggcaacggaaacttcggaggtggc
aactttggaggtggtggtggcggcggaggtggtaactacagtgactttggcaactacagc
aaccagcagtccaactatggtcccatgaaagggaactttggaggtggcggcggcggcggt
ggaagaaacagtggcccatatggtggtggctatggcggtggatctggtggtggatatgga
ggtggctctggtggtagacggttttaa
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