Garra rufa (doctor fish): 141290889
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Entry
141290889 CDS
T11039
Symbol
l3mbtl1
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 1 isoform X1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
grf Garra rufa (doctor fish)
Pathway
grf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
141290889 (l3mbtl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141290889 (l3mbtl1)
03036 Chromosome and associated proteins [BR:
grf03036
]
141290889 (l3mbtl1)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
141290889 (l3mbtl1)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
141290889 (l3mbtl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
SAM_2
MSL3_chromo-like
Motif
Other DBs
NCBI-GeneID:
141290889
NCBI-ProteinID:
XP_073679133
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All DBs
Position
18:16188547..16227194
Genome browser
AA seq
828 aa
AA seq
DB search
MSAKADLDVLPHDADVPSESSVSHAPNDSSAQRLKPQDTTTIIFPASAHPLPKVELPPNA
IKAIKSSELEAASLPAQVGGTIVHVLGWKEGMAILPGSNLKLCVSDTGSLEVISEGKIGS
ANLATGGVQTKSADMELKPAEKPDISAGGNIRPAVFVEADRLQRVRMEALDNPAHSKCSE
TSIKQTYLTELRGETVSENPAGIAEAQVIYHEHEMLKPMKKRKRREYNSPSEEESDAEPM
EEKVEPLKLDGRQSKAVLSIGSTESKLELWSWPQYLEQQKAMAAPARLFQETQRVPIIKN
NFRQGMKLEGIDPQHPSMYFVLTVAEVCGFRLRLHFDGYSDCHDFWVNANCPDIHQPGWC
ESTGHKLYTPKGTFQGCKEEEFSWSNYLKITRSQAAPKELFSSSVKLETDCGFEVGMKLE
AVDRMNPSLICVATVTDKVANRFLVHFDNWDDTYDYWCDAHSPYIHPIGWCQERGLPLTP
PQDYPDPDRFSWERYLEETGSTAVASEAFRVRPSHSFQVQMKLEAVDRRCPGLIRVATVQ
EVDTYRIKIHFDGWSHLYDEWMDSDHPDIHPAGWCENTGHPLKPPPCQPTAQKPGPRENL
TARQPNFSSMSCKSLPQPRSTSKYSFHHRKCPTPGCDGSGHVTGRFTAHHCLSGCPLAER
NQGRLKADLSDTEGSRRNLLVFGQRAKKSRYHGRIGRPPKYRKSQQRNCQNLTSEGMYSS
LFMTAFTANSDRTLSLCWEQHCKLLPGVAGIHAGQVSTWTIEEVFGFVNNLIGCEEQAQI
FKDEMIDGEAFLLLTQNDIVKIMNIKLGPALKIHNAILMFKSTDEGLK
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccaaagcagacctggatgtcctgccacatgatgcagacgtcccatccgaaagc
agcgtctctcacgctcccaatgacagttctgcacagcggctgaaaccccaggatacgacc
acaatcattttcccagcttctgctcatccgttgccaaaagtggagctgcctccaaatgca
atcaaggcgattaaaagcagtgaactggaggccgcatcacttcctgctcaggttggaggg
accatcgtccatgttctgggctggaaggagggaatggccatcctccctggaagcaatctg
aagttatgtgttagtgatactggttcactggaagtgatcagtgaagggaagataggctct
gctaacctggccactggaggagttcagacaaaatcagctgatatggagctcaaaccagct
gaaaaaccagacatctcagcaggtgggaatatcaggccggctgtctttgtggaggcggac
agacttcagcgagtacgtatggaggctctggacaatccagctcatagcaagtgcagtgag
acatcgatcaaacagacgtacctgacggagttacgcggagagacagtgtctgaaaatcct
gcagggattgcagaagcacaggtcatctatcatgagcatgaaatgctgaagcccatgaaa
aagaggaagaggagggaatacaacagcccatcggaggaagagtctgatgctgaaccaatg
gaggagaaagtggagcctttaaaattggatggcagacagagcaaagcagttctctccata
ggttcaacagagagtaagctggagctgtggtcctggccgcagtatctagagcagcagaaa
gctatggccgctccagccagactcttccaggagacccagagggttcccataattaagaac
aacttcagacagggcatgaagttagaaggcatcgacccccagcacccctctatgtatttc
gtcctgacggtcgctgaggtctgcggcttcagattacgtcttcattttgatggttattct
gactgccatgacttctgggtcaacgccaattgccctgatattcaccaacccggatggtgt
gagagcacaggacacaagctgtacacaccaaaaggtacatttcaaggatgtaaagaagaa
gagttttcttggtccaactatctaaaaatcaccagatcacaagccgcaccgaaagagctg
ttctctagctcagtcaaactggagacagactgtgggtttgaggtggggatgaagctggag
gctgtggaccgcatgaacccctctctcatctgtgttgcaacagtaacagacaaagtggcc
aaccgtttcctggttcactttgataactgggacgacacttacgactactggtgtgacgct
catagcccgtacattcatcccattggctggtgtcaggagaggggcctccctctgacgccc
cctcaggattatcctgaccctgacaggttctcgtgggagagatatctggaggagacgggc
tcaacggcggtcgcttctgaagccttcagagtgcgcccttcccacagcttccaggtgcag
atgaagttggaggcggtggataggaggtgtccgggcctgatccgcgttgctacagtgcag
gaggtcgacacttatagaatcaagattcattttgatggctggagtcacttgtatgatgag
tggatggattcagaccatccggacatccaccctgccggctggtgtgaaaacacaggacac
cccctcaaacctccaccctgccagcccaccgcccagaaacctggtcccagggagaacctg
acggcccggcagcccaacttctcctccatgtcttgtaaaagtctgcctcagccacgcagc
acctccaaatacagcttccaccatagaaagtgccctactccgggatgtgatgggtcaggt
catgtgaccgggcggttcacggcacatcactgtttatctggctgtccattggctgagaga
aaccagggccggctaaaagcagatctctccgatacagaaggatccagacgcaacctgctg
gtcttcggccagagagcaaaaaaatcccgatatcatggcaggattggtcgcccccctaaa
tatcgtaaaagtcagcaaagaaattgtcagaatctgacatctgagggaatgtactcgtct
ctgttcatgacagcgtttacagcaaactctgaccgtactctgtctctctgctgggagcag
cactgtaagctactgcctggtgttgcaggaatccatgcaggtcaagtatctacttggact
atagaggaggtctttggatttgtcaataatcttattggttgtgaggagcaggcccaaatt
ttcaaagatgaaatgatcgatggagaggcgtttctcctcctgactcaaaatgatatcgtg
aagatcatgaatataaagctcggaccagcgctgaagattcacaacgccattttaatgttc
aagagcacagacgaaggcctgaagtga
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