Garra rufa (doctor fish): 141291064
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Entry
141291064 CDS
T11039
Name
(RefSeq) polycomb protein SCMH1-like
KO
K11465
sex comb on midleg-like protein 2
Organism
grf Garra rufa (doctor fish)
Pathway
grf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
141291064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
grf03036
]
141291064
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
141291064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
RBR
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
141291064
NCBI-ProteinID:
XP_073679335
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Position
18:complement(40174367..40210503)
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AA seq
724 aa
AA seq
DB search
MLNMVRTALKDHKDSKKDKAGRSMSLTGPGPVKVMESFTWEEYLKDTSSVPAPPACFKQS
RIPPSNDFKVGMKLEARDPRNSTSTCIATVMGLMGVRLRLRLDGSDSTNDFWRLVDSADI
QPIGTCEKNGDMLQPPLGFRMNASSWPMFLLRTLNGAEIAPTTAFKKEPLRPPQNAFKPG
MKLEAVDKKNPYLICPATIGEVKGEEVFVMFDGWRGAFDYWCRYDSRDIFPVGWCTVTKH
SLQPPGNSITTPKPGPTPSSSSSSSSIPKPPRRTMPSPYRLPAPLPQLPVRKGIRGRRPK
SETIALLKALAASTVGQDTEDQGEAVPEPTPISQHPLRSYKKRGPKPGSKRKPRLLHSAM
SMAASSDSRVPMTQIPSDGLSPLGSPSSVVSTVCVYVNKHGNCGPHLDRKQVQRLPDHFG
PEAVNLVLQQTVQACLDCAYQPKVLLGCLQSQGGGGEVVRVRTDGGKRLVKLPSASSAGF
VLRFLERVCRHLQCDNLFSSQPFSPHNTYERAKSVKEEMLSDGPSLNRGVKRISRDSPPY
CAPLSPKLLHTDTHPSEAETLPPEENGLLKEQRFMDSASNSMTPRPQTLRSTSDYQSSPS
SPYYHGNGPPLRRQASNPPTQTHRRVEAASSTTGPETAAAADRVLPRTPGRSPSSWSIEE
VMQFVRDADPTALAPHAELFRKHEIDGKALMLLRSDMVMKYMGLKLGPALKLCHHIERLK
QGKQ
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgctcaacatggtccggacggcactgaaagatcacaaggacagtaagaaggataaagcg
ggccggagcatgtctctcacaggtcctggaccagtcaaagtgatggagtcgttcacatgg
gaggagtatttgaaagacacgtcgtccgttcccgctcctcccgcctgcttcaaacagtct
cggattcctccgtccaacgacttcaaggtgggtatgaagctggaggcccgggaccctcgt
aactccacctccacctgcatcgccacagtgatgggcttgatgggcgtgaggctccgtctg
cgtctggacggcagcgacagcaccaacgacttctggcgattggttgactccgccgacatc
cagccaatcggaacctgcgagaagaacggagacatgctgcagccaccgctgggattcagg
atgaacgcctcgtcgtggcccatgtttctcctgaggacccttaatggagctgaaatagca
cctaccacagcgtttaaaaaggagccactgcggccgccccagaacgccttcaagcccggc
atgaaactggaggccgtggacaagaaaaacccgtacctgatctgtccggcaaccatcggt
gaggtgaagggggaagaggtgtttgtgatgtttgacggctggagaggggctttcgattac
tggtgccgatatgactccagggacatcttccccgtgggctggtgcaccgtcaccaaacac
agcctgcagccacctggaaatagcatcaccactccaaaaccgggtcctacaccttcctcc
tcctcgtcctcttcctctatccccaaaccgccccggcgcaccatgccgtctccttaccga
ctgccagctcctcttcctcaactccctgtgcggaagggtatcaggggacgacggccaaaa
agcgagaccattgcactgctgaaagccctggctgcttccactgtgggccaagacacagaa
gatcaaggagaagccgtgcctgaacccacgcccatctcccagcatcccctgcgttcatac
aagaaaaggggacctaaaccaggcagcaagaggaagcccagacttctccatagcgccatg
tctatggcagccagctcagactccagggtgcccatgactcagattcccagtgatggactc
tctcctctgggatccccctcatctgtggtgtctactgtgtgcgtgtacgtgaacaaacac
gggaactgcggcccacatctggaccgtaagcaggttcagagactgccggatcacttcggg
cccgaggcggtgaatctggttctgcagcagacggttcaggcctgtctggactgcgcgtac
cagcccaaagtgcttctgggatgcctgcagagccaaggcggtggaggagaggtggtcaga
gtccgaacagatggtgggaagcggttggtgaagctgccttcagcgtcaagcgccgggttc
gtgttgcgtttcctggagcgggtgtgtcgacacctgcagtgtgataatctgttcagcagt
caaccgttcagtccacacaacacctacgagcgcgctaaatcagttaaagaggagatgctg
tcagacggtccgtctctaaacaggggtgtaaagcggatctccagagactctccgccatac
tgcgctcctctctccccaaaactcctgcacacagacacacacccctcggaagcggagact
cttcctccagaggagaacggattactgaaggagcagcgcttcatggactccgcctccaat
tccatgacgccccgcccacagaccttgagaagcacctcagattaccaatcatcgcccagc
agtccgtattaccatggcaacggcccgcctctacgacggcaggcctccaacccccccaca
cagacacacagacgagtggaagccgccagctctaccacgggtcccgagacggcggcggcg
gcagaccgcgtccttcccagaacccccggcaggagtccgtcttcctggtccatagaggaa
gtgatgcagttcgtgcgggacgcggacccgacggcgctggctccgcacgcagagctcttc
agaaaacacgagatcgacggcaaagctctgatgttactccggagcgacatggtgatgaag
tacatgggtctgaaactcggaccggcgctcaagctctgccaccacatcgagaggctcaaa
caggggaagcagtga
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